Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:50:15 (17775): wrapper (7.7.26015): starting
03:50:15 (17775): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 03:50:15] Arguments: --nthreads 8
[2026-01-08 03:50:15] Threads: 8
[2026-01-08 03:50:15] Checking for CVMFS
[2026-01-08 03:50:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:50:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:50:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:50:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:50:20] 2.11.2.0 28634 33396 98096 154887 3 11 15560704 25165824 96 130560 0 6643415 99.672 10148213 2792 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 03:50:20] CVMFS is ok
[2026-01-08 03:50:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:50:20] Checking for apptainer binary...
[2026-01-08 03:50:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:50:20] Running /usr/bin/apptainer --version
[2026-01-08 03:50:20] apptainer version 1.3.2-1.el7
[2026-01-08 03:50:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:53:03] cg-vwn465.simple-grid.lan
[2026-01-08 03:53:03] apptainer works
[2026-01-08 03:53:03] Set ATHENA_PROC_NUMBER=8
[2026-01-08 03:53:03] Set ATHENA_CORE_NUMBER=8
[2026-01-08 03:53:03] Starting ATLAS job with PandaID=6962320757
[2026-01-08 03:53:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:47:10]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:47:10] 2026-01-08 08:46:24,953 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,955 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962320757/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:47:10] 2026-01-08 08:46:24,956 | INFO     | extracted standard info from prmon json
[2026-01-08 09:47:10] 2026-01-08 08:46:24,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:47:10] 2026-01-08 08:46:24,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:47:10] 2026-01-08 08:46:24,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:47:10] 2026-01-08 08:46:24,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:47:10] 2026-01-08 08:46:24,963 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:47:10] 2026-01-08 08:46:24,964 | INFO     | sum of square deviations: 11244973630.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,968 | INFO     | sum of deviations: 177373112583.99997
[2026-01-08 09:47:10] 2026-01-08 08:46:24,968 | INFO     | mean x: 1767851760.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,968 | INFO     | mean y: 2438215.2447129907
[2026-01-08 09:47:10] 2026-01-08 08:46:24,968 | INFO     | intersect: -27882853433.794262
[2026-01-08 09:47:10] 2026-01-08 08:46:24,969 | INFO     | chi2: 8.329859394858937
[2026-01-08 09:47:10] 2026-01-08 08:46:24,970 | INFO     | sum of square deviations: 10743038637.5
[2026-01-08 09:47:10] 2026-01-08 08:46:24,973 | INFO     | sum of deviations: 196257957343.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,974 | INFO     | mean x: 1767851607.5
[2026-01-08 09:47:10] 2026-01-08 08:46:24,974 | INFO     | mean y: 2443871.1595092025
[2026-01-08 09:47:10] 2026-01-08 08:46:24,974 | INFO     | intersect: -32293348509.442825
[2026-01-08 09:47:10] 2026-01-08 08:46:24,974 | INFO     | chi2: 7.611642837415584
[2026-01-08 09:47:10] 2026-01-08 08:46:24,975 | INFO     | current chi2=7.611642837415584 (change=8.622193045498776 %)
[2026-01-08 09:47:10] 2026-01-08 08:46:24,975 | INFO     | right removable region: 325
[2026-01-08 09:47:10] 2026-01-08 08:46:24,975 | INFO     | sum of square deviations: 10743038637.5
[2026-01-08 09:47:10] 2026-01-08 08:46:24,985 | INFO     | sum of deviations: 60888397816.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,986 | INFO     | mean x: 1767851912.5
[2026-01-08 09:47:10] 2026-01-08 08:46:24,986 | INFO     | mean y: 2473591.073619632
[2026-01-08 09:47:10] 2026-01-08 08:46:24,986 | INFO     | intersect: -10017193484.528149
[2026-01-08 09:47:10] 2026-01-08 08:46:24,986 | INFO     | chi2: 3.3768224917825727
[2026-01-08 09:47:10] 2026-01-08 08:46:24,987 | INFO     | current chi2=3.3768224917825727 (change=59.46123059572055 %)
[2026-01-08 09:47:10] 2026-01-08 08:46:24,987 | INFO     | sum of square deviations: 10256266720.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,991 | INFO     | sum of deviations: -20411163579.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,991 | INFO     | mean x: 1767852065.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,991 | INFO     | mean y: 2499008.7912772587
[2026-01-08 09:47:10] 2026-01-08 08:46:24,991 | INFO     | intersect: 3520730219.7467527
[2026-01-08 09:47:10] 2026-01-08 08:46:24,992 | INFO     | chi2: 0.9687021086282274
[2026-01-08 09:47:10] 2026-01-08 08:46:24,992 | INFO     | current chi2=0.9687021086282274 (change=71.31320609876464 %)
[2026-01-08 09:47:10] 2026-01-08 08:46:24,993 | INFO     | sum of square deviations: 9784425315.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,996 | INFO     | sum of deviations: -37471307103.0
[2026-01-08 09:47:10] 2026-01-08 08:46:24,996 | INFO     | mean x: 1767852217.5
[2026-01-08 09:47:10] 2026-01-08 08:46:24,997 | INFO     | mean y: 2504485.1139240507
[2026-01-08 09:47:10] 2026-01-08 08:46:24,997 | INFO     | intersect: 6772828875.357589
[2026-01-08 09:47:10] 2026-01-08 08:46:24,997 | INFO     | chi2: 0.8038241425147752
[2026-01-08 09:47:10] 2026-01-08 08:46:24,997 | INFO     | current chi2=0.8038241425147752 (change=17.020502448057513 %)
[2026-01-08 09:47:10] 2026-01-08 08:46:24,998 | INFO     | left removable region: 30
[2026-01-08 09:47:10] 2026-01-08 08:46:24,998 | INFO     | sum of square deviations: 7960484140.0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,007 | INFO     | sum of deviations: -12743725452.000011
[2026-01-08 09:47:10] 2026-01-08 08:46:25,008 | INFO     | mean x: 1767852492.0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,008 | INFO     | mean y: 2510195.9288135595
[2026-01-08 09:47:10] 2026-01-08 08:46:25,008 | INFO     | intersect: 2832617812.685154
[2026-01-08 09:47:10] 2026-01-08 08:46:25,008 | INFO     | chi2: 0.017976302030180146
[2026-01-08 09:47:10] 2026-01-08 08:46:25,009 | INFO     | current memory leak: -1.60 B/s (using 295 data points, chi2=0.02)
[2026-01-08 09:47:10] 2026-01-08 08:46:25,009 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-08 09:47:10] 2026-01-08 08:46:25,009 | INFO     | ..............................
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . Timing measurements:
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . get job = 0 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . initial setup = 14 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . payload setup = 153 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . stage-in = 0 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . payload execution = 20332 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . stage-out = 3 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | . log creation = 1 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,010 | INFO     | ..............................
[2026-01-08 09:47:10] 2026-01-08 08:46:25,582 | INFO     | 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,582 | INFO     | job summary report
[2026-01-08 09:47:10] 2026-01-08 08:46:25,582 | INFO     | --------------------------------------------------
[2026-01-08 09:47:10] 2026-01-08 08:46:25,582 | INFO     | PanDA job id: 6962320757
[2026-01-08 09:47:10] 2026-01-08 08:46:25,582 | INFO     | task id: 47898826
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | errors: (none)
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | pilot state: finished 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | transexitcode: 0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | exeerrorcode: 0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | exeerrordiag: 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | exitcode: 0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | exitmsg: OK
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | cpuconsumptiontime: 76115 s
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | nevents: 400
[2026-01-08 09:47:10] 2026-01-08 08:46:25,583 | INFO     | neventsw: 0
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | pid: 28300
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | pgrp: 28300
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | corecount: 8
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | event service: False
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 33: 2284053, 44: 2284109, 55: 2284265, 65: 2284293, 76: 2284321, 87: 2284377, 98: 2284405, 108: 2285003, 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | --------------------------------------------------
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | 
[2026-01-08 09:47:10] 2026-01-08 08:46:25,584 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 09:47:10] 2026-01-08 08:46:25,830 | INFO     | time since job start (20822s) is within the limit (174528.0s)
[2026-01-08 09:47:10] 2026-01-08 08:46:26,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:47:10] 2026-01-08 08:46:26,114 | INFO     | job 6962320757 has completed (purged errors)
[2026-01-08 09:47:10] 2026-01-08 08:46:26,115 | INFO     | overall cleanup function is called
[2026-01-08 09:47:10] 2026-01-08 08:46:27,124 | INFO     | --- collectZombieJob: --- 10, [28300]
[2026-01-08 09:47:10] 2026-01-08 08:46:27,124 | INFO     | zombie collector waiting for pid 28300
[2026-01-08 09:47:10] 2026-01-08 08:46:27,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:47:10] 2026-01-08 08:46:27,124 | INFO     | collected zombie processes
[2026-01-08 09:47:10] 2026-01-08 08:46:27,124 | INFO     | will attempt to kill all subprocesses of pid=28300
[2026-01-08 09:47:10] 2026-01-08 08:46:27,206 | INFO     | process IDs to be killed: [28300] (in reverse order)
[2026-01-08 09:47:10] 2026-01-08 08:46:27,981 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:47:10] 2026-01-08 08:46:27,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:47:10] 2026-01-08 08:46:27,984 | INFO     | did not find any defunct processes belonging to 28300
[2026-01-08 09:47:10] 2026-01-08 08:46:27,986 | INFO     | did not find any defunct processes belonging to 28300
[2026-01-08 09:47:10] 2026-01-08 08:46:27,986 | INFO     | ready for new job
[2026-01-08 09:47:10] 2026-01-08 08:46:27,986 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:47:10] 2026-01-08 08:46:27,989 | INFO     | ***************************************
[2026-01-08 09:47:10] 2026-01-08 08:46:27,989 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:47:10] 2026-01-08 08:46:27,989 | INFO     | ***************************************
[2026-01-08 09:47:10] 2026-01-08 08:46:27,989 | INFO     | 
[2026-01-08 09:47:10] 2026-01-08 08:46:27,990 | INFO     | pilot is running in a VM
[2026-01-08 09:47:10] 2026-01-08 08:46:27,990 | INFO     | architecture information:
[2026-01-08 09:47:10] 2026-01-08 08:46:27,996 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:47:10] 2026-01-08 08:46:28,252 | INFO     | cat /etc/os-release:
[2026-01-08 09:47:10] NAME="CentOS Linux"
[2026-01-08 09:47:10] VERSION="7 (Core)"
[2026-01-08 09:47:10] ID="centos"
[2026-01-08 09:47:10] ID_LIKE="rhel fedora"
[2026-01-08 09:47:10] VERSION_ID="7"
[2026-01-08 09:47:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:47:10] ANSI_COLOR="0;31"
[2026-01-08 09:47:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:47:10] HOME_URL="https://www.centos.org/"
[2026-01-08 09:47:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:47:10] 
[2026-01-08 09:47:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:47:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:47:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:47:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:47:10] 
[2026-01-08 09:47:10] 2026-01-08 08:46:28,253 | INFO     | ***************************************
[2026-01-08 09:47:10] 2026-01-08 08:46:28,756 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 09:47:10] 2026-01-08 08:46:29,041 | INFO     | sufficient remaining disk space (496330866688 B)
[2026-01-08 09:47:10] 2026-01-08 08:46:29,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:47:10] 2026-01-08 08:46:29,042 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:47:10] 2026-01-08 08:46:29,042 | INFO     | update_server=False
[2026-01-08 09:47:10] 2026-01-08 08:46:29,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:47:10] 2026-01-08 08:46:29,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:47:10] 2026-01-08 08:46:29,345 | INFO     | all payload control threads have been joined
[2026-01-08 09:47:10] 2026-01-08 08:46:29,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:47:10] 2026-01-08 08:46:29,464 | INFO     | aborting loop
[2026-01-08 09:47:10] 2026-01-08 08:46:30,049 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,119 | INFO     | all data control threads have been joined
[2026-01-08 09:47:10] 2026-01-08 08:46:30,143 | INFO     | all job control threads have been joined
[2026-01-08 09:47:10] 2026-01-08 08:46:30,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:47:10] 2026-01-08 08:46:30,241 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,351 | INFO     | [payload] control thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,353 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,467 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,470 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:47:10] 2026-01-08 08:46:30,578 | INFO     | [job] validate thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:30,581 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:31,125 | INFO     | [data] control thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:31,149 | INFO     | [job] control thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:31,202 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:31,459 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:31,511 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:32,500 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:33,052 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:39,215 | INFO     | job.realtimelogging is not enabled
[2026-01-08 09:47:10] 2026-01-08 08:46:40,221 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:47:10] 2026-01-08 08:46:58,677 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:47:10] 2026-01-08 08:46:58,942 | INFO     | PID=21839 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 09:47:10] 2026-01-08 08:46:58,942 | INFO     | .. there are 2 such processes running
[2026-01-08 09:47:10] 2026-01-08 08:46:58,942 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:47:10] 2026-01-08 08:46:58,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:47:10] 2026-01-08 08:46:58,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:47:10] 2026-01-08 08:47:00,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679402198848)>', '<ExcThread(monitor, started 139678820845312)>']
[2026-01-08 09:47:10] 2026-01-08 08:47:00,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:47:10] 2026-01-08 08:47:00,954 | INFO     | [monitor] control thread has ended
[2026-01-08 09:47:10] 2026-01-08 08:47:05,589 | INFO     | all workflow threads have been joined
[2026-01-08 09:47:10] 2026-01-08 08:47:05,589 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:47:10] 2026-01-08 08:47:05,589 | INFO     | traces error code: 0
[2026-01-08 09:47:10] 2026-01-08 08:47:05,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:47:10] 2026-01-08 08:47:05,909 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:47:10] 2026-01-08 08:47:06,000 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:47:10] 2026-01-08 08:47:06,100 [wrapper] pilotpid: 21839
[2026-01-08 09:47:10] 2026-01-08 08:47:06,177 [wrapper] Pilot exit status: 0
[2026-01-08 09:47:10] 2026-01-08 08:47:06,680 [wrapper] pandaids: 6962320757
[2026-01-08 09:47:10] 2026-01-08 08:47:07,455 [wrapper] cleanup supervisor_pilot 27515 21840
[2026-01-08 09:47:10] 2026-01-08 08:47:07,512 [wrapper] Test setup, not cleaning
[2026-01-08 09:47:10] 2026-01-08 08:47:07,656 [wrapper] apfmon messages muted
[2026-01-08 09:47:10] 2026-01-08 08:47:07,743 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:47:10] 2026-01-08 08:47:07,851 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:47:10]  *** Error codes and diagnostics ***
[2026-01-08 09:47:10]     "exeErrorCode": 0,
[2026-01-08 09:47:10]     "exeErrorDiag": "",
[2026-01-08 09:47:10]     "pilotErrorCode": 0,
[2026-01-08 09:47:10]     "pilotErrorDiag": "",
[2026-01-08 09:47:10]  *** Listing of results directory ***
[2026-01-08 09:47:10] total 438908
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 09:47:10] -rwx------. 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc       100 Jan  8 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:47:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 03:50 run_atlas
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc       105 Jan  8 03:50 job.xml
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc      6390 Jan  8 03:50 init_data.xml
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc 222713464 Jan  8 03:50 EVNT.47898824._000679.pool.root.1
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc     15847 Jan  8 03:50 start_atlas.sh
[2026-01-08 09:47:10] drwxrwx--x. 2 boinc boinc        68 Jan  8 03:50 shared
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc    592399 Jan  8 03:50 input.tar.gz
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc         0 Jan  8 03:50 boinc_lockfile
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc      2519 Jan  8 03:53 pandaJob.out
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc    989843 Jan  8 03:59 agis_schedconf.cvmfs.json
[2026-01-08 09:47:10] drwx------. 5 boinc boinc      4096 Jan  8 03:59 pilot3
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc 216203465 Jan  8 09:42 HITS.47898826._014512.pool.root.1
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc       531 Jan  8 09:43 boinc_task_state.xml
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc      1013 Jan  8 09:44 memory_monitor_summary.json
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc   1516240 Jan  8 09:44 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc    549517 Jan  8 09:44 log.47898826._014512.job.log.tgz.1
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc        95 Jan  8 09:46 pilot_heartbeat.json
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc      7777 Jan  8 09:46 heartbeat.json
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc      8192 Jan  8 09:46 boinc_mmap_file
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc        28 Jan  8 09:46 wrapper_checkpoint.txt
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc      4956 Jan  8 09:47 pilotlog.txt
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc   2764197 Jan  8 09:47 log.47898826._014512.job.log.1
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc       357 Jan  8 09:47 output.list
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc       620 Jan  8 09:47 runtime_log
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc   3328000 Jan  8 09:47 result.tar.gz
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc       657 Jan  8 09:47 y3hNDmExpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmB2dKDmBTD1vn.diag
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc      8817 Jan  8 09:47 runtime_log.err
[2026-01-08 09:47:10] -rw-r--r--. 1 boinc boinc     20771 Jan  8 09:47 stderr.txt
[2026-01-08 09:47:10] HITS file was successfully produced:
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc 216203465 Jan  8 09:42 shared/HITS.pool.root.1
[2026-01-08 09:47:10]  *** Contents of shared directory: ***
[2026-01-08 09:47:10] total 432484
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc 222713464 Jan  8 03:50 ATLAS.root_0
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc     15847 Jan  8 03:50 start_atlas.sh
[2026-01-08 09:47:10] -rw-r--r--. 2 boinc boinc    592399 Jan  8 03:50 input.tar.gz
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc 216203465 Jan  8 09:42 HITS.pool.root.1
[2026-01-08 09:47:10] -rw-------. 1 boinc boinc   3328000 Jan  8 09:47 result.tar.gz
09:47:12 (17775): run_atlas exited; CPU time 76318.894126
09:47:12 (17775): called boinc_finish(0)

</stderr_txt>
]]>

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