Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 13:36:30 (10188): vboxwrapper version 26210
2026-01-10 13:36:30 (10188): BOINC client version: 8.2.4
2026-01-10 13:36:31 (10188): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-10 13:36:31 (10188): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 13:36:31 (10188): Create VM. (boinc_dd7aa9d12fdad606, slot#8)
2026-01-10 13:36:32 (10188): Setting Memory Size for VM. (4800MB)
2026-01-10 13:36:32 (10188): Setting CPU Count for VM. (8)
2026-01-10 13:36:32 (10188): Setting Chipset Options for VM.
2026-01-10 13:36:33 (10188): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 13:36:33 (10188): Setting Boot Options for VM.
2026-01-10 13:36:33 (10188): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 13:36:34 (10188): Enabling VM Network Access.
2026-01-10 13:36:34 (10188): Disabling USB Support for VM.
2026-01-10 13:36:34 (10188): Disabling COM Port Support for VM.
2026-01-10 13:36:35 (10188): Disabling LPT Port Support for VM.
2026-01-10 13:36:35 (10188): Disabling Audio Support for VM.
2026-01-10 13:36:35 (10188): Disabling Clipboard Support for VM.
2026-01-10 13:36:35 (10188): Disabling Drag and Drop Support for VM.
2026-01-10 13:36:36 (10188): Adding storage controller(s) to VM.
2026-01-10 13:36:36 (10188): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 13:36:38 (10188): Adding VirtualBox Guest Additions to VM.
2026-01-10 13:36:38 (10188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 13:36:39 (10188): forwarding host port 53513 to guest port 80
2026-01-10 13:36:39 (10188): Enabling remote desktop for VM.
2026-01-10 13:36:39 (10188): Required extension pack not installed, remote desktop not enabled.
2026-01-10 13:36:39 (10188): Enabling shared directory for VM.
2026-01-10 13:36:40 (10188): Starting VM using VBoxManage interface. (boinc_dd7aa9d12fdad606, slot#8)
2026-01-10 13:36:47 (10188): Successfully started VM. (PID = '10888')
2026-01-10 13:36:47 (10188): Reporting VM Process ID to BOINC.
2026-01-10 13:36:47 (10188): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-10 13:36:47 (10188): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 13:36:47 (10188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 13:36:47 (10188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 13:36:47 (10188): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 13:36:47 (10188): Detected: Web Application Enabled (http://localhost:53513)
2026-01-10 13:36:47 (10188): Preference change detected
2026-01-10 13:36:47 (10188): Setting CPU throttle for VM. (60%)
2026-01-10 13:36:48 (10188): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 13:36:49 (10188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 13:36:49 (10188): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 13:36:53 (10188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 13:36:53 (10188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 13:36:53 (10188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 13:37:06 (10188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 13:37:06 (10188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 13:37:22 (10188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000292 main     Log opened 2026-01-10T13:37:21.024874000Z
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000549 main     OS Product: Linux
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000624 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000693 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000763 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000765 main     Process ID: 1372
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.000766 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 13:37:22 (10188): Guest Log: 00:00:00.001978 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 13:37:22 (10188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 13:37:22 (10188): Guest Log: [INFO] Mounting shared directory
2026-01-10 13:37:22 (10188): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 13:37:31 (10188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 13:37:31 (10188): Guest Log: [INFO] Detected branch: prod
2026-01-10 13:37:32 (10188): Guest Log: 00:00:10.051078 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 591 651 000ns (GuestNow=1 768 073 852 620 491 000 ns GuestLast=1 768 052 241 028 840 000 ns fSetTimeLastLoop=true )
2026-01-10 13:37:32 (10188): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 13:37:32 (10188): Guest Log: Copying input files
2026-01-10 13:37:38 (10188): Guest Log: Copied input files into RunAtlas.
2026-01-10 13:37:38 (10188): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 13:37:38 (10188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 13:37:38 (10188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 13:37:38 (10188): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 13:37:51 (10188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 13:37:52 (10188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 13:37:52 (10188): Guest Log: 2.6.3.0 1652 0 32212 154990 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 13:37:53 (10188): Guest Log: copied the webapp to /var/www
2026-01-10 13:37:53 (10188): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-10 13:37:53 (10188): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-10 13:37:54 (10188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 13:37:54 (10188): Guest Log:  *** Starting ATLAS job. (PandaID=6962322779 taskID=47898826) ***
2026-01-10 15:16:53 (10188): Status Report: Elapsed Time: '6000.000000'
2026-01-10 15:16:53 (10188): Status Report: CPU Time: '16935.453125'
2026-01-10 16:57:00 (10188): Status Report: Elapsed Time: '12000.000000'
2026-01-10 16:57:00 (10188): Status Report: CPU Time: '45638.593750'
2026-01-10 18:10:44 (10188): VM state change detected. (old = 'running', new = 'paused')
2026-01-11 03:28:29 (10188): VM state change detected. (old = 'paused', new = 'running')
2026-01-11 03:28:33 (10188): Guest Log: 04:33:24.694267 timesync vgsvcTimeSyncWorker: Radical host time change: 33 475 536 000 000ns (HostNow=1 768 123 712 882 000 000 ns HostLast=1 768 090 237 346 000 000 ns)
2026-01-11 03:28:43 (10188): Guest Log: 04:33:34.741682 timesync vgsvcTimeSyncWorker: Radical guest time change: 33 475 666 253 000ns (GuestNow=1 768 123 722 929 629 000 ns GuestLast=1 768 090 247 263 376 000 ns fSetTimeLastLoop=true )
2026-01-11 03:55:00 (10188): Status Report: Elapsed Time: '18000.000000'
2026-01-11 03:55:00 (10188): Status Report: CPU Time: '74279.156250'
2026-01-11 05:35:07 (10188): Status Report: Elapsed Time: '24000.000000'
2026-01-11 05:35:07 (10188): Status Report: CPU Time: '102973.265625'
2026-01-11 07:15:14 (10188): Status Report: Elapsed Time: '30000.000000'
2026-01-11 07:15:14 (10188): Status Report: CPU Time: '130701.562500'
2026-01-11 07:21:21 (10188): Guest Log:  *** Job finished ***
2026-01-11 07:21:21 (10188): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:20:58,815 | INFO     | all workflow threads have been joined
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:20:58,816 | INFO     | end of generic workflow (traces error code: 0)
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:20:58,818 | INFO     | traces error code: 0
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:20:58,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,427 | INFO     | PID=6108 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,428 | INFO     | found 0 job(s) in 20 queues
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,429 | INFO     | [monitor] control thread has ended
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,771 [wrapper] ==== pilot stdout END ====
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,779 [wrapper] ==== wrapper stdout RESUME ====
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,786 [wrapper] pilotpid: 6108
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:18,793 [wrapper] Pilot exit status: 0
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,036 [wrapper] pandaids: 6962322779
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,097 [wrapper] cleanup supervisor_pilot 31386 6109
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,109 [wrapper] Test setup, not cleaning
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,115 [wrapper] apfmon messages muted
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,121 [wrapper] ==== wrapper stdout END ====
2026-01-11 07:21:21 (10188): Guest Log: 2026-01-11 13:21:19,126 [wrapper] ==== wrapper stderr END ====
2026-01-11 07:21:21 (10188): Guest Log:  *** Error codes and diagnostics ***
2026-01-11 07:21:21 (10188): Guest Log:     "exeErrorCode": 0,
2026-01-11 07:21:21 (10188): Guest Log:     "exeErrorDiag": "",
2026-01-11 07:21:21 (10188): Guest Log:     "pilotErrorCode": 0,
2026-01-11 07:21:21 (10188): Guest Log:     "pilotErrorDiag": "",
2026-01-11 07:21:21 (10188): Guest Log:  *** Listing of results directory ***
2026-01-11 07:21:21 (10188): Guest Log: total 223096
2026-01-11 07:21:21 (10188): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  7 21:00 pilot3.tar.gz
2026-01-11 07:21:21 (10188): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  7 21:07 runpilot2-wrapper.sh
2026-01-11 07:21:21 (10188): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  7 21:16 queuedata.json
2026-01-11 07:21:21 (10188): Guest Log: -rwxr-xr-x. 1 atlas atlas      7736 Jan 10 19:37 init_data.xml
2026-01-11 07:21:21 (10188): Guest Log: -rwxr-xr-x. 1 atlas atlas    592406 Jan 10 19:37 input.tar.gz
2026-01-11 07:21:21 (10188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 19:37 start_atlas.sh
2026-01-11 07:21:21 (10188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 19:37 EVNT.47898824._000728.pool.root.1 -> /data/./ATLAS.root_0
2026-01-11 07:21:21 (10188): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 10 19:37 pandaJob.out
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas    989540 Jan 10 19:40 agis_schedconf.cvmfs.json
2026-01-11 07:21:21 (10188): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 19:40 pilot3
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas 216766757 Jan 11 13:17 HITS.47898826._015614.pool.root.1
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas      1029 Jan 11 13:19 memory_monitor_summary.json
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 11 13:20 agis_ddmendpoints.agis.ALL.json
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas    634932 Jan 11 13:20 log.47898826._015614.job.log.tgz.1
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas        98 Jan 11 13:20 pilot_heartbeat.json
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas      7834 Jan 11 13:20 heartbeat.json
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas       744 Jan 11 13:21 pilotlog.txt
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas   3286126 Jan 11 13:21 log.47898826._015614.job.log.1
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas       357 Jan 11 13:21 output.list
2026-01-11 07:21:21 (10188): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 11 13:21 runtime_log
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas   3942400 Jan 11 13:21 result.tar.gz
2026-01-11 07:21:21 (10188): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Jan 11 13:21 runtime_log.err
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas       663 Jan 11 13:21 nhGNDmJvpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvydKDmGTBh1n.diag
2026-01-11 07:21:21 (10188): Guest Log: Looking for outputfile HITS.47898826._015614.pool.root.1
2026-01-11 07:21:21 (10188): Guest Log: HITS file was successfully produced
2026-01-11 07:21:21 (10188): Guest Log: -rw-------. 1 atlas atlas 216766757 Jan 11 13:17 /home/atlas/RunAtlas/HITS.47898826._015614.pool.root.1
2026-01-11 07:21:24 (10188): Guest Log: Successfully finished the ATLAS job!
2026-01-11 07:21:24 (10188): Guest Log: Copying the results back to the shared directory!
2026-01-11 07:21:24 (10188): Guest Log:  *** Contents of shared directory: ***
2026-01-11 07:21:24 (10188): Guest Log: total 435472
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root 224591620 Jan 10 19:36 ATLAS.root_0
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root 216766757 Jan 11 13:21 HITS.pool.root.1
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root      7736 Jan 10 19:36 init_data.xml
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root    592406 Jan  8 02:47 input.tar.gz
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root   3942400 Jan 11 13:21 result.tar.gz
2026-01-11 07:21:24 (10188): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 02:47 start_atlas.sh
2026-01-11 07:21:24 (10188): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-11 07:21:24 (10188): VM Completion File Detected.
2026-01-11 07:21:24 (10188): Powering off VM.
2026-01-11 07:21:25 (10188): Successfully stopped VM.
2026-01-11 07:21:25 (10188): Deregistering VM. (boinc_dd7aa9d12fdad606, slot#8)
2026-01-11 07:21:25 (10188): Removing network bandwidth throttle group from VM.
2026-01-11 07:21:25 (10188): Removing VM from VirtualBox.
2026-01-11 07:21:30 (10188): called boinc_finish(0)

</stderr_txt>
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