Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 03:33:32 (61908): vboxwrapper version 26210
2026-01-08 03:33:32 (61908): BOINC client version: 8.2.8
2026-01-08 03:33:32 (61908): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-08 03:33:33 (61908): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 03:33:33 (61908): Create VM. (boinc_b7264e987fb9ff9b, slot#25)
2026-01-08 03:33:33 (61908): Setting Memory Size for VM. (4096MB)
2026-01-08 03:33:34 (61908): Setting CPU Count for VM. (1)
2026-01-08 03:33:34 (61908): Setting Chipset Options for VM.
2026-01-08 03:33:34 (61908): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 03:33:34 (61908): Setting Boot Options for VM.
2026-01-08 03:33:35 (61908): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 03:33:35 (61908): Enabling VM Network Access.
2026-01-08 03:33:35 (61908): Disabling USB Support for VM.
2026-01-08 03:33:36 (61908): Disabling COM Port Support for VM.
2026-01-08 03:33:36 (61908): Disabling LPT Port Support for VM.
2026-01-08 03:33:36 (61908): Disabling Audio Support for VM.
2026-01-08 03:33:36 (61908): Disabling Clipboard Support for VM.
2026-01-08 03:33:37 (61908): Disabling Drag and Drop Support for VM.
2026-01-08 03:33:37 (61908): Adding storage controller(s) to VM.
2026-01-08 03:33:37 (61908): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 03:33:38 (61908): Attempts: 2
2026-01-08 03:33:39 (61908): Adding VirtualBox Guest Additions to VM.
2026-01-08 03:33:39 (61908): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 03:33:39 (61908): forwarding host port 55553 to guest port 80
2026-01-08 03:33:40 (61908): Enabling remote desktop for VM.
2026-01-08 03:33:40 (61908): Enabling shared directory for VM.
2026-01-08 03:33:41 (61908): Starting VM using VBoxManage interface. (boinc_b7264e987fb9ff9b, slot#25)
2026-01-08 03:33:45 (61908): Successfully started VM. (PID = '61024')
2026-01-08 03:33:45 (61908): Reporting VM Process ID to BOINC.
2026-01-08 03:33:45 (61908): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-08 03:33:45 (61908): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 03:33:45 (61908): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 03:33:45 (61908): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 03:33:45 (61908): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 03:33:45 (61908): Detected: Web Application Enabled (http://localhost:55553)
2026-01-08 03:33:45 (61908): Detected: Remote Desktop Enabled (localhost:55554)
2026-01-08 03:33:45 (61908): Preference change detected
2026-01-08 03:33:45 (61908): Setting CPU throttle for VM. (100%)
2026-01-08 03:33:45 (61908): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 03:33:47 (61908): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 03:33:47 (61908): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 03:33:49 (61908): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 03:33:49 (61908): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 03:33:49 (61908): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 03:33:52 (61908): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 03:33:52 (61908): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 03:33:56 (61908): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000177 main     Log opened 2026-01-08T03:33:54.990816000Z
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000292 main     OS Product: Linux
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000309 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000321 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000333 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000334 main     Process ID: 1239
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.000334 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 03:33:56 (61908): Guest Log: 00:00:00.001371 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 03:33:56 (61908): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 03:33:56 (61908): Guest Log: [INFO] Mounting shared directory
2026-01-08 03:33:56 (61908): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 03:33:57 (61908): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 03:33:57 (61908): Guest Log: [INFO] Detected branch: prod
2026-01-08 03:33:57 (61908): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 03:33:57 (61908): Guest Log: Copying input files
2026-01-08 03:33:58 (61908): Guest Log: Copied input files into RunAtlas.
2026-01-08 03:33:58 (61908): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-08 03:34:06 (61908): Guest Log: 00:00:10.012155 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 577 153 000ns (GuestNow=1 767 839 646 425 311 000 ns GuestLast=1 767 843 235 002 464 000 ns fSetTimeLastLoop=true )
2026-01-08 03:34:08 (61908): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 03:34:08 (61908): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 03:34:08 (61908): Guest Log: 2.6.3.0 1510 0 31540 154887 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-08 03:34:08 (61908): Guest Log: copied the webapp to /var/www
2026-01-08 03:34:08 (61908): Guest Log: core_number=1
2026-01-08 03:34:08 (61908): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 03:34:08 (61908): Guest Log:  *** Starting ATLAS job. (PandaID=6962321598 taskID=47898826) ***
2026-01-08 05:13:48 (61908): Status Report: Elapsed Time: '6000.000000'
2026-01-08 05:13:48 (61908): Status Report: CPU Time: '5929.093750'
2026-01-08 05:14:44 (61908): VM state change detected. (old = 'running', new = 'paused')
2026-01-08 05:44:54 (61908): VM state change detected. (old = 'paused', new = 'running')
2026-01-08 05:45:03 (61908): Guest Log: 01:40:53.357278 timesync vgsvcTimeSyncWorker: Radical host time change: 1 813 969 000 000ns (HostNow=1 767 847 488 355 000 000 ns HostLast=1 767 845 674 386 000 000 ns)
2026-01-08 05:45:14 (61908): Guest Log: 01:41:03.362457 timesync vgsvcTimeSyncWorker: Radical guest time change: 1 808 589 750 000ns (GuestNow=1 767 847 498 360 184 000 ns GuestLast=1 767 845 689 770 434 000 ns fSetTimeLastLoop=true )
2026-01-08 07:24:02 (61908): Status Report: Elapsed Time: '12000.000000'
2026-01-08 07:24:02 (61908): Status Report: CPU Time: '11900.390625'
2026-01-08 09:04:05 (61908): Status Report: Elapsed Time: '18000.000000'
2026-01-08 09:04:05 (61908): Status Report: CPU Time: '17870.125000'
2026-01-08 10:44:07 (61908): Status Report: Elapsed Time: '24000.000000'
2026-01-08 10:44:07 (61908): Status Report: CPU Time: '23835.906250'
2026-01-08 12:24:10 (61908): Status Report: Elapsed Time: '30000.000000'
2026-01-08 12:24:10 (61908): Status Report: CPU Time: '29805.531250'
2026-01-08 13:39:20 (61908): Guest Log:  *** Job finished ***
2026-01-08 13:39:20 (61908): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:58,807 | INFO     | all workflow threads have been joined
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:58,808 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:58,808 | INFO     | traces error code: 0
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:58,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | INFO     | PID=5856 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | INFO     | found 0 job(s) in 20 queues
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,000 | INFO     | [monitor] control thread has ended
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,120 [wrapper] ==== pilot stdout END ====
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,122 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,124 [wrapper] pilotpid: 5856
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,125 [wrapper] Pilot exit status: 0
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,161 [wrapper] pandaids: 6962321598
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,170 [wrapper] cleanup supervisor_pilot 17420 5857
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,172 [wrapper] Test setup, not cleaning
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,174 [wrapper] apfmon messages muted
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,176 [wrapper] ==== wrapper stdout END ====
2026-01-08 13:39:20 (61908): Guest Log: 2026-01-08 12:38:59,178 [wrapper] ==== wrapper stderr END ====
2026-01-08 13:39:20 (61908): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 13:39:20 (61908): Guest Log:     "exeErrorCode": 0,
2026-01-08 13:39:20 (61908): Guest Log:     "exeErrorDiag": "",
2026-01-08 13:39:20 (61908): Guest Log:     "pilotErrorCode": 0,
2026-01-08 13:39:20 (61908): Guest Log:     "pilotErrorDiag": "",
2026-01-08 13:39:20 (61908): Guest Log:  *** Listing of results directory ***
2026-01-08 13:39:20 (61908): Guest Log: total 240204
2026-01-08 13:39:20 (61908): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  7 21:00 pilot3.tar.gz
2026-01-08 13:39:20 (61908): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  7 21:06 runpilot2-wrapper.sh
2026-01-08 13:39:20 (61908): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  7 21:11 queuedata.json
2026-01-08 13:39:20 (61908): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Jan  8 02:33 init_data.xml
2026-01-08 13:39:20 (61908): Guest Log: -rwxr-xr-x. 1 atlas atlas    592402 Jan  8 02:33 input.tar.gz
2026-01-08 13:39:20 (61908): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 02:33 start_atlas.sh
2026-01-08 13:39:20 (61908): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 02:33 EVNT.47898824._000691.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 13:39:20 (61908): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan  8 02:34 pandaJob.out
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas        50 Jan  8 02:34 setup.sh.local
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas    989843 Jan  8 02:34 agis_schedconf.cvmfs.json
2026-01-08 13:39:20 (61908): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 02:34 pilot3
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas 231368167 Jan  8 12:37 HITS.47898826._014799.pool.root.1
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas        97 Jan  8 12:38 pilot_heartbeat.json
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas      1023 Jan  8 12:38 memory_monitor_summary.json
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  8 12:38 agis_ddmendpoints.agis.ALL.json
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas    631561 Jan  8 12:38 log.47898826._014799.job.log.tgz.1
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas      7806 Jan  8 12:38 heartbeat.json
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas       744 Jan  8 12:38 pilotlog.txt
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas   4745384 Jan  8 12:38 log.47898826._014799.job.log.1
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas       357 Jan  8 12:38 output.list
2026-01-08 13:39:20 (61908): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  8 12:38 runtime_log
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas   5396480 Jan  8 12:38 result.tar.gz
2026-01-08 13:39:20 (61908): Guest Log: -rw-r--r--. 1 atlas atlas      9115 Jan  8 12:38 runtime_log.err
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas       658 Jan  8 12:38 BiOMDmJupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTrdKDmpmPJNn.diag
2026-01-08 13:39:20 (61908): Guest Log: Looking for outputfile HITS.47898826._014799.pool.root.1
2026-01-08 13:39:20 (61908): Guest Log: HITS file was successfully produced
2026-01-08 13:39:20 (61908): Guest Log: -rw-------. 1 atlas atlas 231368167 Jan  8 12:37 /home/atlas/RunAtlas/HITS.47898826._014799.pool.root.1
2026-01-08 13:39:21 (61908): Guest Log: Successfully finished the ATLAS job!
2026-01-08 13:39:21 (61908): Guest Log: Copying the results back to the shared directory!
2026-01-08 13:39:21 (61908): Guest Log:  *** Contents of shared directory: ***
2026-01-08 13:39:21 (61908): Guest Log: total 455000
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root 228525921 Jan  8 02:33 ATLAS.root_0
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root 231368167 Jan  8  2026 HITS.pool.root.1
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root      9354 Jan  8 02:33 init_data.xml
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root    592402 Jan  8 02:32 input.tar.gz
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root   5396480 Jan  8  2026 result.tar.gz
2026-01-08 13:39:21 (61908): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 02:32 start_atlas.sh
2026-01-08 13:39:21 (61908): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 13:39:21 (61908): VM Completion File Detected.
2026-01-08 13:39:21 (61908): Powering off VM.
2026-01-08 13:39:22 (61908): Successfully stopped VM.
2026-01-08 13:39:22 (61908): Deregistering VM. (boinc_b7264e987fb9ff9b, slot#25)
2026-01-08 13:39:22 (61908): Removing network bandwidth throttle group from VM.
2026-01-08 13:39:22 (61908): Removing VM from VirtualBox.
2026-01-08 13:39:27 (61908): called boinc_finish(0)

</stderr_txt>
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