Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:14 (13764): wrapper (7.7.26015): starting
11:37:14 (13764): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:37:14] Arguments: --nthreads 8
[2026-01-08 11:37:14] Threads: 8
[2026-01-08 11:37:14] Checking for CVMFS
[2026-01-08 11:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:37:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:37:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:37:18] 2.11.2.0 28971 33865 99928 154901 2 60 18430279 25165824 96 130560 0 17052948 99.836 9714806 4298 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 11:37:18] CVMFS is ok
[2026-01-08 11:37:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:37:18] Checking for apptainer binary...
[2026-01-08 11:37:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:37:18] Running /usr/bin/apptainer --version
[2026-01-08 11:37:18] apptainer version 1.3.2-1.el7
[2026-01-08 11:37:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:37:36] cg-vwn489.simple-grid.lan
[2026-01-08 11:37:36] apptainer works
[2026-01-08 11:37:36] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:37:36] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:37:36] Starting ATLAS job with PandaID=6962322870
[2026-01-08 11:37:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:20:54]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:20:54] 2026-01-08 16:19:48,945 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 17:20:54] 2026-01-08 16:19:48,947 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6962322870/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,947 | INFO     | extracted standard info from prmon json
[2026-01-08 17:20:54] 2026-01-08 16:19:48,947 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:20:54] 2026-01-08 16:19:48,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:20:54] 2026-01-08 16:19:48,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:20:54] 2026-01-08 16:19:48,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:20:54] 2026-01-08 16:19:48,954 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:20:54] 2026-01-08 16:19:48,955 | INFO     | sum of square deviations: 10352419220.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,958 | INFO     | sum of deviations: 190870244095.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,959 | INFO     | mean x: 1767879270.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,959 | INFO     | mean y: 2420439.9565217393
[2026-01-08 17:20:54] 2026-01-08 16:19:48,959 | INFO     | intersect: -32592429198.921234
[2026-01-08 17:20:54] 2026-01-08 16:19:48,959 | INFO     | chi2: 9.200876758804078
[2026-01-08 17:20:54] 2026-01-08 16:19:48,960 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,963 | INFO     | sum of deviations: 231669482997.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,963 | INFO     | mean x: 1767879118.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,964 | INFO     | mean y: 2433409.457413249
[2026-01-08 17:20:54] 2026-01-08 16:19:48,964 | INFO     | intersect: -41461405321.04031
[2026-01-08 17:20:54] 2026-01-08 16:19:48,964 | INFO     | chi2: 7.620092830048308
[2026-01-08 17:20:54] 2026-01-08 16:19:48,964 | INFO     | current chi2=7.620092830048308 (change=17.180796680524598 %)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,964 | INFO     | right removable region: 316
[2026-01-08 17:20:54] 2026-01-08 16:19:48,965 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,968 | INFO     | sum of deviations: 79170809137.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,968 | INFO     | mean x: 1767879423.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,969 | INFO     | mean y: 2456298.649842271
[2026-01-08 17:20:54] 2026-01-08 16:19:48,969 | INFO     | intersect: -14167412715.164667
[2026-01-08 17:20:54] 2026-01-08 16:19:48,969 | INFO     | chi2: 4.369260723569088
[2026-01-08 17:20:54] 2026-01-08 16:19:48,969 | INFO     | current chi2=4.369260723569088 (change=52.51256116012796 %)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,970 | INFO     | sum of square deviations: 9417545878.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,973 | INFO     | sum of deviations: -4795991623.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,973 | INFO     | mean x: 1767879575.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,973 | INFO     | mean y: 2484096.951923077
[2026-01-08 17:20:54] 2026-01-08 16:19:48,973 | INFO     | intersect: 902796741.5934124
[2026-01-08 17:20:54] 2026-01-08 16:19:48,974 | INFO     | chi2: 1.7950345826823488
[2026-01-08 17:20:54] 2026-01-08 16:19:48,974 | INFO     | current chi2=1.7950345826823488 (change=58.91674367246157 %)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,975 | INFO     | sum of square deviations: 8971993338.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,977 | INFO     | sum of deviations: -15451254128.000004
[2026-01-08 17:20:54] 2026-01-08 16:19:48,978 | INFO     | mean x: 1767879728.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,978 | INFO     | mean y: 2487720.7980456026
[2026-01-08 17:20:54] 2026-01-08 16:19:48,978 | INFO     | intersect: 3047068553.172659
[2026-01-08 17:20:54] 2026-01-08 16:19:48,978 | INFO     | chi2: 1.736232642228807
[2026-01-08 17:20:54] 2026-01-08 16:19:48,979 | INFO     | current chi2=1.736232642228807 (change=3.2758110078120684 %)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,979 | INFO     | left removable region: 30
[2026-01-08 17:20:54] 2026-01-08 16:19:48,979 | INFO     | sum of square deviations: 7253894147.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,982 | INFO     | sum of deviations: 17741880988.0
[2026-01-08 17:20:54] 2026-01-08 16:19:48,982 | INFO     | mean x: 1767880002.5
[2026-01-08 17:20:54] 2026-01-08 16:19:48,982 | INFO     | mean y: 2505636.839160839
[2026-01-08 17:20:54] 2026-01-08 16:19:48,982 | INFO     | intersect: -4321450016.171027
[2026-01-08 17:20:54] 2026-01-08 16:19:48,983 | INFO     | chi2: 0.0015404079355001623
[2026-01-08 17:20:54] 2026-01-08 16:19:48,983 | INFO     | current memory leak: 2.45 B/s (using 286 data points, chi2=0.00)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | ..............................
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . Timing measurements:
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . get job = 0 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . initial setup = 7 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . payload setup = 147 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . stage-in = 0 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,984 | INFO     | . payload execution = 19763 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,985 | INFO     | . stage-out = 3 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,985 | INFO     | . log creation = 1 s
[2026-01-08 17:20:54] 2026-01-08 16:19:48,985 | INFO     | ..............................
[2026-01-08 17:20:54] 2026-01-08 16:19:49,110 | INFO     | 
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | job summary report
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | --------------------------------------------------
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | PanDA job id: 6962322870
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | task id: 47898826
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | errors: (none)
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | pilot state: finished 
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | transexitcode: 0
[2026-01-08 17:20:54] 2026-01-08 16:19:49,111 | INFO     | exeerrorcode: 0
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | exeerrordiag: 
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | exitcode: 0
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | exitmsg: OK
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | cpuconsumptiontime: 73526 s
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | nevents: 400
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | neventsw: 0
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | pid: 23983
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | pgrp: 23983
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | corecount: 8
[2026-01-08 17:20:54] 2026-01-08 16:19:49,112 | INFO     | event service: False
[2026-01-08 17:20:54] 2026-01-08 16:19:49,113 | INFO     | sizes: {0: 2283743, 1: 2283998, 2: 2283998, 12: 2284026, 23: 2284054, 34: 2284082, 44: 2284238, 55: 2284266, 66: 2284294, 77: 2284322, 87: 2284378, 98: 2284686, 10
[2026-01-08 17:20:54] 2026-01-08 16:19:49,113 | INFO     | --------------------------------------------------
[2026-01-08 17:20:54] 2026-01-08 16:19:49,113 | INFO     | 
[2026-01-08 17:20:54] 2026-01-08 16:19:49,113 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-08 17:20:54] 2026-01-08 16:19:49,434 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | job 6962322870 has completed (purged errors)
[2026-01-08 17:20:54] 2026-01-08 16:19:49,436 | INFO     | overall cleanup function is called
[2026-01-08 17:20:54] 2026-01-08 16:19:50,445 | INFO     | --- collectZombieJob: --- 10, [23983]
[2026-01-08 17:20:54] 2026-01-08 16:19:50,445 | INFO     | zombie collector waiting for pid 23983
[2026-01-08 17:20:54] 2026-01-08 16:19:50,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:20:54] 2026-01-08 16:19:50,446 | INFO     | collected zombie processes
[2026-01-08 17:20:54] 2026-01-08 16:19:50,446 | INFO     | will attempt to kill all subprocesses of pid=23983
[2026-01-08 17:20:54] 2026-01-08 16:19:50,513 | INFO     | process IDs to be killed: [23983] (in reverse order)
[2026-01-08 17:20:54] 2026-01-08 16:19:51,321 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:20:54] 2026-01-08 16:19:51,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:20:54] 2026-01-08 16:19:51,329 | INFO     | did not find any defunct processes belonging to 23983
[2026-01-08 17:20:54] 2026-01-08 16:19:51,331 | INFO     | did not find any defunct processes belonging to 23983
[2026-01-08 17:20:54] 2026-01-08 16:19:51,332 | INFO     | ready for new job
[2026-01-08 17:20:54] 2026-01-08 16:19:51,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:20:54] 2026-01-08 16:19:51,334 | INFO     | ***************************************
[2026-01-08 17:20:54] 2026-01-08 16:19:51,334 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:20:54] 2026-01-08 16:19:51,334 | INFO     | ***************************************
[2026-01-08 17:20:54] 2026-01-08 16:19:51,334 | INFO     | 
[2026-01-08 17:20:54] 2026-01-08 16:19:51,335 | INFO     | pilot is running in a VM
[2026-01-08 17:20:54] 2026-01-08 16:19:51,335 | INFO     | architecture information:
[2026-01-08 17:20:54] 2026-01-08 16:19:51,352 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:20:54] 2026-01-08 16:19:51,748 | INFO     | cat /etc/os-release:
[2026-01-08 17:20:54] NAME="CentOS Linux"
[2026-01-08 17:20:54] VERSION="7 (Core)"
[2026-01-08 17:20:54] ID="centos"
[2026-01-08 17:20:54] ID_LIKE="rhel fedora"
[2026-01-08 17:20:54] VERSION_ID="7"
[2026-01-08 17:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:20:54] ANSI_COLOR="0;31"
[2026-01-08 17:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:20:54] HOME_URL="https://www.centos.org/"
[2026-01-08 17:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:20:54] 
[2026-01-08 17:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:20:54] 
[2026-01-08 17:20:54] 2026-01-08 16:19:51,748 | INFO     | ***************************************
[2026-01-08 17:20:54] 2026-01-08 16:19:52,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-08 17:20:54] 2026-01-08 16:19:52,581 | INFO     | sufficient remaining disk space (497073258496 B)
[2026-01-08 17:20:54] 2026-01-08 16:19:52,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:20:54] 2026-01-08 16:19:52,581 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:20:54] 2026-01-08 16:19:52,582 | INFO     | update_server=False
[2026-01-08 17:20:54] 2026-01-08 16:19:52,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:20:54] 2026-01-08 16:19:52,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:20:54] 2026-01-08 16:19:52,629 | INFO     | all data control threads have been joined
[2026-01-08 17:20:54] 2026-01-08 16:19:52,719 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:20:54] 2026-01-08 16:19:52,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:20:54] 2026-01-08 16:19:52,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:20:54] 2026-01-08 16:19:52,720 | INFO     | will abort loop
[2026-01-08 17:20:54] 2026-01-08 16:19:53,587 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:53,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:20:54] 2026-01-08 16:19:53,635 | INFO     | [data] control thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:53,641 | INFO     | all payload control threads have been joined
[2026-01-08 17:20:54] 2026-01-08 16:19:53,695 | INFO     | [job] validate thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:53,725 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:53,916 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:53,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,107 | INFO     | all job control threads have been joined
[2026-01-08 17:20:54] 2026-01-08 16:19:54,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:20:54] 2026-01-08 16:19:54,184 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,375 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,594 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,629 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,647 | INFO     | [payload] control thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,789 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:54,903 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:55,113 | INFO     | [job] control thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:55,124 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:19:57,609 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:20:54] 2026-01-08 16:20:22,069 | INFO     | PID=17510 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 17:20:54] 2026-01-08 16:20:22,069 | INFO     | .. there are 2 such processes running
[2026-01-08 17:20:54] 2026-01-08 16:20:22,069 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:20:54] 2026-01-08 16:20:22,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:20:54] 2026-01-08 16:20:22,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:20:54] 2026-01-08 16:20:42,541 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:20:54] 2026-01-08 16:20:43,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811003381568)>', '<ExcThread(monitor, started 139810438113024)>']
[2026-01-08 17:20:54] 2026-01-08 16:20:44,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:20:54] 2026-01-08 16:20:44,201 | INFO     | [monitor] control thread has ended
[2026-01-08 17:20:54] 2026-01-08 16:20:48,574 | INFO     | all workflow threads have been joined
[2026-01-08 17:20:54] 2026-01-08 16:20:48,574 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:20:54] 2026-01-08 16:20:48,575 | INFO     | traces error code: 0
[2026-01-08 17:20:54] 2026-01-08 16:20:48,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:20:54] 2026-01-08 16:20:48,976 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:20:54] 2026-01-08 16:20:49,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:20:54] 2026-01-08 16:20:49,081 [wrapper] pilotpid: 17510
[2026-01-08 17:20:54] 2026-01-08 16:20:49,135 [wrapper] Pilot exit status: 0
[2026-01-08 17:20:54] 2026-01-08 16:20:49,624 [wrapper] pandaids: 6962322870
[2026-01-08 17:20:54] 2026-01-08 16:20:50,819 [wrapper] cleanup supervisor_pilot 22001 17511
[2026-01-08 17:20:54] 2026-01-08 16:20:50,930 [wrapper] Test setup, not cleaning
[2026-01-08 17:20:54] 2026-01-08 16:20:51,052 [wrapper] apfmon messages muted
[2026-01-08 17:20:54] 2026-01-08 16:20:51,190 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:20:54] 2026-01-08 16:20:51,280 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:20:54]  *** Error codes and diagnostics ***
[2026-01-08 17:20:54]     "exeErrorCode": 0,
[2026-01-08 17:20:54]     "exeErrorDiag": "",
[2026-01-08 17:20:54]     "pilotErrorCode": 0,
[2026-01-08 17:20:54]     "pilotErrorDiag": "",
[2026-01-08 17:20:54]  *** Listing of results directory ***
[2026-01-08 17:20:54] total 443072
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 17:20:54] -rwx------. 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:12 queuedata.json
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc       100 Jan  8 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:20:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 11:37 run_atlas
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc       105 Jan  8 11:37 job.xml
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc      6390 Jan  8 11:37 init_data.xml
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc 225195231 Jan  8 11:37 EVNT.47898824._000732.pool.root.1
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:37 start_atlas.sh
[2026-01-08 17:20:54] drwxrwx--x. 2 boinc boinc        68 Jan  8 11:37 shared
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc    592397 Jan  8 11:37 input.tar.gz
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc         0 Jan  8 11:37 boinc_lockfile
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc      2519 Jan  8 11:37 pandaJob.out
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc    989835 Jan  8 11:42 agis_schedconf.cvmfs.json
[2026-01-08 17:20:54] drwx------. 5 boinc boinc      4096 Jan  8 11:42 pilot3
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc 218134998 Jan  8 17:16 HITS.47898826._015705.pool.root.1
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc       531 Jan  8 17:16 boinc_task_state.xml
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc      1041 Jan  8 17:17 memory_monitor_summary.json
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc   1516240 Jan  8 17:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc    535760 Jan  8 17:17 log.47898826._015705.job.log.tgz.1
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc        95 Jan  8 17:19 pilot_heartbeat.json
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc      7782 Jan  8 17:19 heartbeat.json
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc        28 Jan  8 17:20 wrapper_checkpoint.txt
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc      8192 Jan  8 17:20 boinc_mmap_file
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc      5071 Jan  8 17:20 pilotlog.txt
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc   2705559 Jan  8 17:20 log.47898826._015705.job.log.1
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc       357 Jan  8 17:20 output.list
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc       620 Jan  8 17:20 runtime_log
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc   3256320 Jan  8 17:20 result.tar.gz
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc       657 Jan  8 17:20 WG0KDmhupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhvdKDmBSB4Ko.diag
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc      8833 Jan  8 17:20 runtime_log.err
[2026-01-08 17:20:54] -rw-r--r--. 1 boinc boinc     20775 Jan  8 17:20 stderr.txt
[2026-01-08 17:20:54] HITS file was successfully produced:
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc 218134998 Jan  8 17:16 shared/HITS.pool.root.1
[2026-01-08 17:20:54]  *** Contents of shared directory: ***
[2026-01-08 17:20:54] total 436720
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc 225195231 Jan  8 11:37 ATLAS.root_0
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:37 start_atlas.sh
[2026-01-08 17:20:54] -rw-r--r--. 2 boinc boinc    592397 Jan  8 11:37 input.tar.gz
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc 218134998 Jan  8 17:16 HITS.pool.root.1
[2026-01-08 17:20:54] -rw-------. 1 boinc boinc   3256320 Jan  8 17:20 result.tar.gz
17:20:56 (13764): run_atlas exited; CPU time 73716.989180
17:20:56 (13764): called boinc_finish(0)

</stderr_txt>
]]>

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