Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:39:26 (2381086): wrapper (7.7.26015): starting
08:39:26 (2381086): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 08:39:26] Arguments: --nthreads 4
[2026-01-08 08:39:26] Threads: 4
[2026-01-08 08:39:26] Checking for CVMFS
[2026-01-08 08:39:26] No cvmfs_config command found, will try listing directly
[2026-01-08 08:39:26] CVMFS is ok
[2026-01-08 08:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:39:26] Further information can be found at the LHC@home message board.
[2026-01-08 08:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:39:26] Checking for apptainer binary...
[2026-01-08 08:39:26] which: no apptainer in ((null))
[2026-01-08 08:39:26] apptainer is not installed, using version from CVMFS
[2026-01-08 08:39:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:39:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-08 08:39:26] apptainer works
[2026-01-08 08:39:26] Set ATHENA_PROC_NUMBER=4
[2026-01-08 08:39:26] Set ATHENA_CORE_NUMBER=4
[2026-01-08 08:39:26] Starting ATLAS job with PandaID=6962321517
[2026-01-08 08:39:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 12:43:55]  *** The last 200 lines of the pilot log: ***
[2026-01-08 12:43:55] 2026-01-08 11:40:34,115 | INFO     | time since job start (14453s) is within the limit (174528.0s)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,601 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 12:43:55] 2026-01-08 11:40:35,620 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2687.5605546874995
[2026-01-08 12:43:55] 2026-01-08 11:40:35,644 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6962321517/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,646 | INFO     | extracted standard info from prmon json
[2026-01-08 12:43:55] 2026-01-08 11:40:35,646 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 12:43:55] 2026-01-08 11:40:35,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 12:43:55] 2026-01-08 11:40:35,646 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 12:43:55] 2026-01-08 11:40:35,646 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 12:43:55] 2026-01-08 11:40:35,651 | INFO     | fitting pss+swap vs Time
[2026-01-08 12:43:55] 2026-01-08 11:40:35,651 | INFO     | sum of square deviations: 4127772278.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,653 | INFO     | sum of deviations: -48185049606.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,653 | INFO     | mean x: 1767865214.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,653 | INFO     | mean y: 2355601.8734177216
[2026-01-08 12:43:55] 2026-01-08 11:40:35,653 | INFO     | intersect: 20639315999.937267
[2026-01-08 12:43:55] 2026-01-08 11:40:35,654 | INFO     | chi2: 2.2110604059332273
[2026-01-08 12:43:55] 2026-01-08 11:40:35,654 | INFO     | sum of square deviations: 3871990738.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,655 | INFO     | sum of deviations: -33623674000.500004
[2026-01-08 12:43:55] 2026-01-08 11:40:35,655 | INFO     | mean x: 1767865061.5
[2026-01-08 12:43:55] 2026-01-08 11:40:35,656 | INFO     | mean y: 2364145.6077586208
[2026-01-08 12:43:55] 2026-01-08 11:40:35,656 | INFO     | intersect: 15354187671.780123
[2026-01-08 12:43:55] 2026-01-08 11:40:35,656 | INFO     | chi2: 1.5560367478902548
[2026-01-08 12:43:55] 2026-01-08 11:40:35,656 | INFO     | current chi2=1.5560367478902548 (change=29.624864896737417 %)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,656 | INFO     | sum of square deviations: 3627000098.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,658 | INFO     | sum of deviations: -32833935457.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,658 | INFO     | mean x: 1767864909.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,658 | INFO     | mean y: 2364637.2731277533
[2026-01-08 12:43:55] 2026-01-08 11:40:35,658 | INFO     | intersect: 16006213755.11817
[2026-01-08 12:43:55] 2026-01-08 11:40:35,658 | INFO     | chi2: 1.552690080543222
[2026-01-08 12:43:55] 2026-01-08 11:40:35,659 | INFO     | current chi2=1.552690080543222 (change=0.21507636960183493 %)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,659 | INFO     | right removable region: 226
[2026-01-08 12:43:55] 2026-01-08 11:40:35,659 | INFO     | sum of square deviations: 3871990738.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,660 | INFO     | sum of deviations: -70296844934.00002
[2026-01-08 12:43:55] 2026-01-08 11:40:35,660 | INFO     | mean x: 1767865366.5
[2026-01-08 12:43:55] 2026-01-08 11:40:35,661 | INFO     | mean y: 2368568.525862069
[2026-01-08 12:43:55] 2026-01-08 11:40:35,661 | INFO     | intersect: 32098353797.36233
[2026-01-08 12:43:55] 2026-01-08 11:40:35,661 | INFO     | chi2: 1.033834767679095
[2026-01-08 12:43:55] 2026-01-08 11:40:35,661 | INFO     | current chi2=1.033834767679095 (change=53.242581482402244 %)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,661 | INFO     | sum of square deviations: 3627000098.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | sum of deviations: -61277771124.99999
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | mean x: 1767865519.0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | mean y: 2362941.665198238
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | intersect: 29870258096.34058
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | chi2: 1.0143311567562328
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | current chi2=1.0143311567562328 (change=1.886530762226824 %)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,663 | INFO     | left removable region: 20
[2026-01-08 12:43:55] 2026-01-08 11:40:35,664 | INFO     | sum of square deviations: 2710627567.5
[2026-01-08 12:43:55] 2026-01-08 11:40:35,665 | INFO     | sum of deviations: -25857104895.499996
[2026-01-08 12:43:55] 2026-01-08 11:40:35,665 | INFO     | mean x: 1767865488.5
[2026-01-08 12:43:55] 2026-01-08 11:40:35,665 | INFO     | mean y: 2358140.014563107
[2026-01-08 12:43:55] 2026-01-08 11:40:35,665 | INFO     | intersect: 16866306520.587816
[2026-01-08 12:43:55] 2026-01-08 11:40:35,665 | INFO     | chi2: 0.2546455091556769
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | current memory leak: -9.54 B/s (using 206 data points, chi2=0.25)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | could have reported an average CPU frequency of 2631 MHz (11 samples)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | ..............................
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | . Timing measurements:
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | . get job = 0 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | . initial setup = 1 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | . payload setup = 9 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,666 | INFO     | . stage-in = 0 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,667 | INFO     | . payload execution = 14408 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,667 | INFO     | . stage-out = 1 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,667 | INFO     | . log creation = 0 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,667 | INFO     | ..............................
[2026-01-08 12:43:55] 2026-01-08 11:40:35,812 | INFO     | 
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | job summary report
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | --------------------------------------------------
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | PanDA job id: 6962321517
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | task id: 47898826
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | errors: (none)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | pilot state: finished 
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | transexitcode: 0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,813 | INFO     | exeerrorcode: 0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | exeerrordiag: 
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | exitcode: 0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | exitmsg: OK
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | cpuconsumptiontime: 55335 s
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | nevents: 400
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | neventsw: 0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | pid: 2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | pgrp: 2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | corecount: 4
[2026-01-08 12:43:55] 2026-01-08 11:40:35,814 | INFO     | event service: False
[2026-01-08 12:43:55] 2026-01-08 11:40:35,815 | INFO     | sizes: {0: 2283979, 7: 2284241, 11: 2284269, 14421: 2315518, 14423: 2324540, 14426: 2324596, 14436: 2324918}
[2026-01-08 12:43:55] 2026-01-08 11:40:35,815 | INFO     | --------------------------------------------------
[2026-01-08 12:43:55] 2026-01-08 11:40:35,815 | INFO     | 
[2026-01-08 12:43:55] 2026-01-08 11:40:35,815 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2026-01-08 12:43:55] 2026-01-08 11:40:35,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,848 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 12:43:55] 2026-01-08 11:40:35,849 | INFO     | job 6962321517 has completed (purged errors)
[2026-01-08 12:43:55] 2026-01-08 11:40:35,849 | INFO     | overall cleanup function is called
[2026-01-08 12:43:55] 2026-01-08 11:40:36,857 | INFO     | --- collectZombieJob: --- 10, [2396174]
[2026-01-08 12:43:55] 2026-01-08 11:40:36,858 | INFO     | zombie collector waiting for pid 2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:36,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 12:43:55] 2026-01-08 11:40:36,858 | INFO     | collected zombie processes
[2026-01-08 12:43:55] 2026-01-08 11:40:36,858 | INFO     | will attempt to kill all subprocesses of pid=2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:37,718 | INFO     | process IDs to be killed: [2396174] (in reverse order)
[2026-01-08 12:43:55] 2026-01-08 11:40:37,977 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 12:43:55] 2026-01-08 11:40:37,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 12:43:55] 2026-01-08 11:40:38,011 | INFO     | did not find any defunct processes belonging to 2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:38,043 | INFO     | did not find any defunct processes belonging to 2396174
[2026-01-08 12:43:55] 2026-01-08 11:40:38,044 | INFO     | ready for new job
[2026-01-08 12:43:55] 2026-01-08 11:40:38,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 12:43:55] 2026-01-08 11:40:38,046 | INFO     | ***************************************
[2026-01-08 12:43:55] 2026-01-08 11:40:38,047 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 12:43:55] 2026-01-08 11:40:38,047 | INFO     | ***************************************
[2026-01-08 12:43:55] 2026-01-08 11:40:38,047 | INFO     | 
[2026-01-08 12:43:55] 2026-01-08 11:40:38,055 | INFO     | architecture information:
[2026-01-08 12:43:55] 2026-01-08 11:40:38,056 | INFO     | executing command: cat /etc/os-release
[2026-01-08 12:43:55] 2026-01-08 11:40:38,077 | INFO     | cat /etc/os-release:
[2026-01-08 12:43:55] NAME="CentOS Linux"
[2026-01-08 12:43:55] VERSION="7 (Core)"
[2026-01-08 12:43:55] ID="centos"
[2026-01-08 12:43:55] ID_LIKE="rhel fedora"
[2026-01-08 12:43:55] VERSION_ID="7"
[2026-01-08 12:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 12:43:55] ANSI_COLOR="0;31"
[2026-01-08 12:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 12:43:55] HOME_URL="https://www.centos.org/"
[2026-01-08 12:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 12:43:55] 
[2026-01-08 12:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 12:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 12:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 12:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 12:43:55] 
[2026-01-08 12:43:55] 2026-01-08 11:40:38,078 | INFO     | ***************************************
[2026-01-08 12:43:55] 2026-01-08 11:40:38,581 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2026-01-08 12:43:55] 2026-01-08 11:40:38,608 | INFO     | sufficient remaining disk space (3323783544832 B)
[2026-01-08 12:43:55] 2026-01-08 11:40:38,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 12:43:55] 2026-01-08 11:40:38,609 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 12:43:55] 2026-01-08 11:40:38,609 | INFO     | update_server=False
[2026-01-08 12:43:55] 2026-01-08 11:40:38,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 12:43:55] 2026-01-08 11:40:38,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 12:43:55] 2026-01-08 11:40:39,091 | INFO     | all payload control threads have been joined
[2026-01-08 12:43:55] 2026-01-08 11:40:39,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:43:55] 2026-01-08 11:40:39,285 | INFO     | aborting loop
[2026-01-08 12:43:55] 2026-01-08 11:40:39,392 | INFO     | all job control threads have been joined
[2026-01-08 12:43:55] 2026-01-08 11:40:39,614 | INFO     | [job] retrieve thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:39,677 | INFO     | all data control threads have been joined
[2026-01-08 12:43:55] 2026-01-08 11:40:39,805 | INFO     | [data] copytool_in thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:39,812 | INFO     | [job] validate thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:39,845 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,096 | INFO     | [payload] control thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,237 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,290 | INFO     | [job] job monitor thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,397 | INFO     | [job] control thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,614 | INFO     | [data] copytool_out thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,682 | INFO     | [data] control thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:43:55] 2026-01-08 11:40:40,785 | INFO     | [payload] validate_post thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:40,979 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:41,041 | INFO     | [payload] failed_post thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:41,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 12:43:55] 2026-01-08 11:40:41,786 | INFO     | [job] queue monitor thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:45,107 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:40:49,164 | INFO     | job.realtimelogging is not enabled
[2026-01-08 12:43:55] 2026-01-08 11:40:50,168 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 12:43:55] 2026-01-08 11:41:04,136 | INFO     | [monitor] cgroup control has ended
[2026-01-08 12:43:55] 2026-01-08 11:41:06,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22759870986048)>', '<ExcThread(monitor, started 22759428048640)>']
[2026-01-08 12:43:55] 2026-01-08 11:41:08,245 | INFO     | PID=2386424 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | INFO     | .. there are 7 such processes running
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 12:43:55] 2026-01-08 11:41:08,246 | INFO     | [monitor] control thread has ended
[2026-01-08 12:43:55] 2026-01-08 11:41:11,034 | INFO     | all workflow threads have been joined
[2026-01-08 12:43:55] 2026-01-08 11:41:11,035 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 12:43:55] 2026-01-08 11:41:11,035 | INFO     | traces error code: 0
[2026-01-08 12:43:55] 2026-01-08 11:41:11,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 12:43:55] 2026-01-08 11:41:11,216 [wrapper] ==== pilot stdout END ====
[2026-01-08 12:43:55] 2026-01-08 11:41:11,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 12:43:55] 2026-01-08 11:41:11,224 [wrapper] pilotpid: 2386424
[2026-01-08 12:43:55] 2026-01-08 11:41:11,228 [wrapper] Pilot exit status: 0
[2026-01-08 12:43:55] 2026-01-08 11:41:11,243 [wrapper] pandaids: 6962321517
[2026-01-08 12:43:55] 2026-01-08 11:41:11,411 [wrapper] cleanup supervisor_pilot 2789963 2386425
[2026-01-08 12:43:55] 2026-01-08 11:41:11,415 [wrapper] Test setup, not cleaning
[2026-01-08 12:43:55] 2026-01-08 11:41:11,419 [wrapper] apfmon messages muted
[2026-01-08 12:43:55] 2026-01-08 11:41:11,424 [wrapper] ==== wrapper stdout END ====
[2026-01-08 12:43:55] 2026-01-08 11:41:11,429 [wrapper] ==== wrapper stderr END ====
[2026-01-08 12:43:55]  *** Error codes and diagnostics ***
[2026-01-08 12:43:55]     "exeErrorCode": 0,
[2026-01-08 12:43:55]     "exeErrorDiag": "",
[2026-01-08 12:43:55]     "pilotErrorCode": 0,
[2026-01-08 12:43:55]     "pilotErrorDiag": "",
[2026-01-08 12:43:55]  *** Listing of results directory ***
[2026-01-08 12:43:55] total 446804
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 12:43:55] -rwx------ 1 boinc boinc     36322 Jan  7 22:05 runpilot2-wrapper.sh
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:11 queuedata.json
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc       100 Jan  8 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 12:43:55] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 08:39 run_atlas
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc       105 Jan  8 08:39 job.xml
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc      6690 Jan  8 08:39 init_data.xml
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc 225674921 Jan  8 08:39 EVNT.47898824._000688.pool.root.1
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  8 08:39 start_atlas.sh
[2026-01-08 12:43:55] drwxrwx--x 2 boinc boinc      4096 Jan  8 08:39 shared
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc    592402 Jan  8 08:39 input.tar.gz
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc         0 Jan  8 08:39 boinc_lockfile
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc      2518 Jan  8 08:39 pandaJob.out
[2026-01-08 12:43:55] -rw------- 1 boinc boinc    989819 Jan  8 08:39 agis_schedconf.cvmfs.json
[2026-01-08 12:43:55] drwx------ 5 boinc boinc      4096 Jan  8 08:39 pilot3
[2026-01-08 12:43:55] -rw------- 1 boinc boinc 223155560 Jan  8 12:39 HITS.47898826._014718.pool.root.1
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc       530 Jan  8 12:39 boinc_task_state.xml
[2026-01-08 12:43:55] -rw------- 1 boinc boinc      1034 Jan  8 12:40 memory_monitor_summary.json
[2026-01-08 12:43:55] -rw------- 1 boinc boinc   1516240 Jan  8 12:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 12:43:55] -rw------- 1 boinc boinc    393751 Jan  8 12:40 log.47898826._014718.job.log.tgz.1
[2026-01-08 12:43:55] -rw------- 1 boinc boinc        95 Jan  8 12:40 pilot_heartbeat.json
[2026-01-08 12:43:55] -rw------- 1 boinc boinc      7803 Jan  8 12:40 heartbeat.json
[2026-01-08 12:43:55] -rw------- 1 boinc boinc      4907 Jan  8 12:41 pilotlog.txt
[2026-01-08 12:43:55] -rw------- 1 boinc boinc   1996053 Jan  8 12:41 log.47898826._014718.job.log.1
[2026-01-08 12:43:55] -rw------- 1 boinc boinc       357 Jan  8 12:41 output.list
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc       620 Jan  8 12:41 runtime_log
[2026-01-08 12:43:55] -rw------- 1 boinc boinc   2406400 Jan  8 12:41 result.tar.gz
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc      9223 Jan  8 12:41 runtime_log.err
[2026-01-08 12:43:55] -rw------- 1 boinc boinc       667 Jan  8 12:41 CLHLDmAupx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDziKDmPACuLo.diag
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc        27 Jan  8 12:43 wrapper_checkpoint.txt
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc      8192 Jan  8 12:43 boinc_mmap_file
[2026-01-08 12:43:55] -rw-r--r-- 1 boinc boinc     20859 Jan  8 12:43 stderr.txt
[2026-01-08 12:43:55] HITS file was successfully produced:
[2026-01-08 12:43:55] -rw------- 1 boinc boinc 223155560 Jan  8 12:39 shared/HITS.pool.root.1
[2026-01-08 12:43:55]  *** Contents of shared directory: ***
[2026-01-08 12:43:55] total 441272
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc 225674921 Jan  8 08:39 ATLAS.root_0
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  8 08:39 start_atlas.sh
[2026-01-08 12:43:55] -rw-r--r-- 2 boinc boinc    592402 Jan  8 08:39 input.tar.gz
[2026-01-08 12:43:55] -rw------- 1 boinc boinc 223155560 Jan  8 12:39 HITS.pool.root.1
[2026-01-08 12:43:55] -rw------- 1 boinc boinc   2406400 Jan  8 12:41 result.tar.gz
12:43:56 (2381086): run_atlas exited; CPU time 56372.290123
12:43:56 (2381086): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN