Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:28 (11438): wrapper (7.7.26015): starting
13:01:28 (11438): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 13:01:28] Arguments: --nthreads 8
[2026-01-08 13:01:28] Threads: 8
[2026-01-08 13:01:28] Checking for CVMFS
[2026-01-08 13:01:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:01:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:01:32] 2.11.2.0 29086 33947 99900 154906 0 60 16569303 25165824 96 130560 0 13965126 99.792 10213968 2921 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 13:01:32] CVMFS is ok
[2026-01-08 13:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:01:32] Checking for apptainer binary...
[2026-01-08 13:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:01:32] Running /usr/bin/apptainer --version
[2026-01-08 13:01:32] apptainer version 1.3.2-1.el7
[2026-01-08 13:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:01:51] cg-vwn413.simple-grid.lan
[2026-01-08 13:01:51] apptainer works
[2026-01-08 13:01:51] Set ATHENA_PROC_NUMBER=8
[2026-01-08 13:01:51] Set ATHENA_CORE_NUMBER=8
[2026-01-08 13:01:51] Starting ATLAS job with PandaID=6962320576
[2026-01-08 13:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:20:31]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:20:31] 2026-01-08 18:19:35,601 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 19:20:31] 2026-01-08 18:19:35,603 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6962320576/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,603 | INFO     | extracted standard info from prmon json
[2026-01-08 19:20:31] 2026-01-08 18:19:35,604 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:20:31] 2026-01-08 18:19:35,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:20:31] 2026-01-08 18:19:35,604 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:20:31] 2026-01-08 18:19:35,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:20:31] 2026-01-08 18:19:35,612 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:20:31] 2026-01-08 18:19:35,613 | INFO     | sum of square deviations: 13990234405.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,617 | INFO     | sum of deviations: 218856950795.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,618 | INFO     | mean x: 1767885394.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,618 | INFO     | mean y: 2438502.491573034
[2026-01-08 19:20:31] 2026-01-08 18:19:35,618 | INFO     | intersect: -27653567508.236137
[2026-01-08 19:20:31] 2026-01-08 18:19:35,619 | INFO     | chi2: 8.648167303774748
[2026-01-08 19:20:31] 2026-01-08 18:19:35,625 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,629 | INFO     | sum of deviations: 238849981975.00006
[2026-01-08 19:20:31] 2026-01-08 18:19:35,629 | INFO     | mean x: 1767885242.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,629 | INFO     | mean y: 2443677.1794871795
[2026-01-08 19:20:31] 2026-01-08 18:19:35,629 | INFO     | intersect: -31488308559.74187
[2026-01-08 19:20:31] 2026-01-08 18:19:35,630 | INFO     | chi2: 7.930634064287103
[2026-01-08 19:20:31] 2026-01-08 18:19:35,630 | INFO     | current chi2=7.930634064287103 (change=8.296939851920495 %)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,630 | INFO     | right removable region: 350
[2026-01-08 19:20:31] 2026-01-08 18:19:35,631 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,635 | INFO     | sum of deviations: 93751141926.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,635 | INFO     | mean x: 1767885547.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,635 | INFO     | mean y: 2471313.037037037
[2026-01-08 19:20:31] 2026-01-08 18:19:35,636 | INFO     | intersect: -12357983844.821404
[2026-01-08 19:20:31] 2026-01-08 18:19:35,636 | INFO     | chi2: 3.717217061526629
[2026-01-08 19:20:31] 2026-01-08 18:19:35,636 | INFO     | current chi2=3.717217061526629 (change=57.01728550158668 %)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,637 | INFO     | sum of square deviations: 12844082682.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,641 | INFO     | sum of deviations: -1880406953.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,641 | INFO     | mean x: 1767885699.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,641 | INFO     | mean y: 2497105.210982659
[2026-01-08 19:20:31] 2026-01-08 18:19:35,641 | INFO     | intersect: 261320148.0478537
[2026-01-08 19:20:31] 2026-01-08 18:19:35,642 | INFO     | chi2: 0.9941626616076312
[2026-01-08 19:20:31] 2026-01-08 18:19:35,656 | INFO     | current chi2=0.9941626616076312 (change=73.25518942928404 %)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,657 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,661 | INFO     | sum of deviations: -18798108615.000004
[2026-01-08 19:20:31] 2026-01-08 18:19:35,661 | INFO     | mean x: 1767885852.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,661 | INFO     | mean y: 2501778.4369501467
[2026-01-08 19:20:31] 2026-01-08 18:19:35,662 | INFO     | intersect: 2705405329.304996
[2026-01-08 19:20:31] 2026-01-08 18:19:35,662 | INFO     | chi2: 0.8638344497000404
[2026-01-08 19:20:31] 2026-01-08 18:19:35,662 | INFO     | current chi2=0.8638344497000404 (change=13.109344872884371 %)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,662 | INFO     | left removable region: 30
[2026-01-08 19:20:31] 2026-01-08 18:19:35,663 | INFO     | sum of square deviations: 10160711440.0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,667 | INFO     | sum of deviations: 19724014560.999996
[2026-01-08 19:20:31] 2026-01-08 18:19:35,667 | INFO     | mean x: 1767886126.5
[2026-01-08 19:20:31] 2026-01-08 18:19:35,667 | INFO     | mean y: 2503164.39375
[2026-01-08 19:20:31] 2026-01-08 18:19:35,667 | INFO     | intersect: -3429324607.4296646
[2026-01-08 19:20:31] 2026-01-08 18:19:35,668 | INFO     | chi2: 0.0017148539410849943
[2026-01-08 19:20:31] 2026-01-08 18:19:35,668 | INFO     | current memory leak: 1.94 B/s (using 320 data points, chi2=0.00)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | ..............................
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | . Timing measurements:
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | . get job = 0 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | . initial setup = 18 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | . payload setup = 154 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,669 | INFO     | . stage-in = 0 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,670 | INFO     | . payload execution = 21875 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,670 | INFO     | . stage-out = 4 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,670 | INFO     | . log creation = 1 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,670 | INFO     | ..............................
[2026-01-08 19:20:31] 2026-01-08 18:19:35,866 | INFO     | 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | job summary report
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | --------------------------------------------------
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | PanDA job id: 6962320576
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | task id: 47898826
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | errors: (none)
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | pilot state: finished 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | transexitcode: 0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,867 | INFO     | exeerrorcode: 0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | exeerrordiag: 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | exitcode: 0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | exitmsg: OK
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | cpuconsumptiontime: 81910 s
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | nevents: 400
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | neventsw: 0
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | pid: 21658
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | pgrp: 21658
[2026-01-08 19:20:31] 2026-01-08 18:19:35,868 | INFO     | corecount: 8
[2026-01-08 19:20:31] 2026-01-08 18:19:35,869 | INFO     | event service: False
[2026-01-08 19:20:31] 2026-01-08 18:19:35,869 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 34: 2284054, 44: 2284082, 55: 2284238, 66: 2284266, 76: 2284294, 87: 2284350, 98: 2284378, 109: 2284686, 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,869 | INFO     | --------------------------------------------------
[2026-01-08 19:20:31] 2026-01-08 18:19:35,869 | INFO     | 
[2026-01-08 19:20:31] 2026-01-08 18:19:35,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-08 19:20:31] 2026-01-08 18:19:36,473 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:20:31] 2026-01-08 18:19:36,476 | INFO     | job 6962320576 has completed (purged errors)
[2026-01-08 19:20:31] 2026-01-08 18:19:36,476 | INFO     | overall cleanup function is called
[2026-01-08 19:20:31] 2026-01-08 18:19:37,484 | INFO     | --- collectZombieJob: --- 10, [21658]
[2026-01-08 19:20:31] 2026-01-08 18:19:37,485 | INFO     | zombie collector waiting for pid 21658
[2026-01-08 19:20:31] 2026-01-08 18:19:37,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:20:31] 2026-01-08 18:19:37,485 | INFO     | collected zombie processes
[2026-01-08 19:20:31] 2026-01-08 18:19:37,485 | INFO     | will attempt to kill all subprocesses of pid=21658
[2026-01-08 19:20:31] 2026-01-08 18:19:37,573 | INFO     | process IDs to be killed: [21658] (in reverse order)
[2026-01-08 19:20:31] 2026-01-08 18:19:38,519 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:20:31] 2026-01-08 18:19:38,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:20:31] 2026-01-08 18:19:38,522 | INFO     | did not find any defunct processes belonging to 21658
[2026-01-08 19:20:31] 2026-01-08 18:19:38,524 | INFO     | did not find any defunct processes belonging to 21658
[2026-01-08 19:20:31] 2026-01-08 18:19:38,524 | INFO     | ready for new job
[2026-01-08 19:20:31] 2026-01-08 18:19:38,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:20:31] 2026-01-08 18:19:38,526 | INFO     | ***************************************
[2026-01-08 19:20:31] 2026-01-08 18:19:38,527 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:20:31] 2026-01-08 18:19:38,527 | INFO     | ***************************************
[2026-01-08 19:20:31] 2026-01-08 18:19:38,527 | INFO     | 
[2026-01-08 19:20:31] 2026-01-08 18:19:38,527 | INFO     | pilot is running in a VM
[2026-01-08 19:20:31] 2026-01-08 18:19:38,528 | INFO     | architecture information:
[2026-01-08 19:20:31] 2026-01-08 18:19:38,539 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:20:31] 2026-01-08 18:19:38,831 | INFO     | cat /etc/os-release:
[2026-01-08 19:20:31] NAME="CentOS Linux"
[2026-01-08 19:20:31] VERSION="7 (Core)"
[2026-01-08 19:20:31] ID="centos"
[2026-01-08 19:20:31] ID_LIKE="rhel fedora"
[2026-01-08 19:20:31] VERSION_ID="7"
[2026-01-08 19:20:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:20:31] ANSI_COLOR="0;31"
[2026-01-08 19:20:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:20:31] HOME_URL="https://www.centos.org/"
[2026-01-08 19:20:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:20:31] 
[2026-01-08 19:20:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:20:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:20:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:20:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:20:31] 
[2026-01-08 19:20:31] 2026-01-08 18:19:38,831 | INFO     | ***************************************
[2026-01-08 19:20:31] 2026-01-08 18:19:39,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-08 19:20:31] 2026-01-08 18:19:39,581 | INFO     | sufficient remaining disk space (497031315456 B)
[2026-01-08 19:20:31] 2026-01-08 18:19:39,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:20:31] 2026-01-08 18:19:39,582 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:20:31] 2026-01-08 18:19:39,582 | INFO     | update_server=False
[2026-01-08 19:20:31] 2026-01-08 18:19:39,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:20:31] 2026-01-08 18:19:39,741 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 19:20:31] 2026-01-08 18:19:39,742 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 19:20:31] 2026-01-08 18:19:39,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:20:31] 2026-01-08 18:19:39,742 | INFO     | will abort loop
[2026-01-08 19:20:31] 2026-01-08 18:19:40,033 | INFO     | all job control threads have been joined
[2026-01-08 19:20:31] 2026-01-08 18:19:40,064 | INFO     | all data control threads have been joined
[2026-01-08 19:20:31] 2026-01-08 18:19:40,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:20:31] 2026-01-08 18:19:40,245 | INFO     | all payload control threads have been joined
[2026-01-08 19:20:31] 2026-01-08 18:19:40,589 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:40,646 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:40,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:20:31] 2026-01-08 18:19:40,747 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:40,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:20:31] 2026-01-08 18:19:41,039 | INFO     | [job] control thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,070 | INFO     | [data] control thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,251 | INFO     | [payload] control thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,553 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,642 | INFO     | [job] validate thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,707 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,884 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,960 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:41,982 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:42,053 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:42,103 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:19:44,672 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:20:31] 2026-01-08 18:20:08,382 | INFO     | PID=15195 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 19:20:31] 2026-01-08 18:20:08,382 | INFO     | .. there are 2 such processes running
[2026-01-08 19:20:31] 2026-01-08 18:20:08,382 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:20:31] 2026-01-08 18:20:08,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:20:31] 2026-01-08 18:20:08,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:20:31] 2026-01-08 18:20:19,286 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:20:31] 2026-01-08 18:20:20,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034095675200)>', '<ExcThread(monitor, started 140033432475392)>']
[2026-01-08 19:20:31] 2026-01-08 18:20:21,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:20:31] 2026-01-08 18:20:21,461 | INFO     | [monitor] control thread has ended
[2026-01-08 19:20:31] 2026-01-08 18:20:25,791 | INFO     | all workflow threads have been joined
[2026-01-08 19:20:31] 2026-01-08 18:20:25,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:20:31] 2026-01-08 18:20:25,792 | INFO     | traces error code: 0
[2026-01-08 19:20:31] 2026-01-08 18:20:25,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:20:31] 2026-01-08 18:20:26,222 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:20:31] 2026-01-08 18:20:26,317 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:20:31] 2026-01-08 18:20:26,415 [wrapper] pilotpid: 15195
[2026-01-08 19:20:31] 2026-01-08 18:20:26,515 [wrapper] Pilot exit status: 0
[2026-01-08 19:20:31] 2026-01-08 18:20:27,071 [wrapper] pandaids: 6962320576
[2026-01-08 19:20:31] 2026-01-08 18:20:28,106 [wrapper] cleanup supervisor_pilot 21023 15196
[2026-01-08 19:20:31] 2026-01-08 18:20:28,242 [wrapper] Test setup, not cleaning
[2026-01-08 19:20:31] 2026-01-08 18:20:28,367 [wrapper] apfmon messages muted
[2026-01-08 19:20:31] 2026-01-08 18:20:28,492 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:20:31] 2026-01-08 18:20:28,606 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:20:31]  *** Error codes and diagnostics ***
[2026-01-08 19:20:31]     "exeErrorCode": 0,
[2026-01-08 19:20:31]     "exeErrorDiag": "",
[2026-01-08 19:20:31]     "pilotErrorCode": 0,
[2026-01-08 19:20:31]     "pilotErrorDiag": "",
[2026-01-08 19:20:31]  *** Listing of results directory ***
[2026-01-08 19:20:31] total 443124
[2026-01-08 19:20:31] -rwx------. 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc       100 Jan  8 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:20:31] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 13:01 run_atlas
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc       105 Jan  8 13:01 job.xml
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc      6391 Jan  8 13:01 init_data.xml
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc 226607106 Jan  8 13:01 EVNT.47898824._000674.pool.root.1
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:01 start_atlas.sh
[2026-01-08 19:20:31] drwxrwx--x. 2 boinc boinc        68 Jan  8 13:01 shared
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc    592399 Jan  8 13:01 input.tar.gz
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc         0 Jan  8 13:01 boinc_lockfile
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc      2519 Jan  8 13:01 pandaJob.out
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc    989835 Jan  8 13:06 agis_schedconf.cvmfs.json
[2026-01-08 19:20:31] drwx------. 5 boinc boinc      4096 Jan  8 13:06 pilot3
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc 216138190 Jan  8 19:16 HITS.47898826._014389.pool.root.1
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc       531 Jan  8 19:16 boinc_task_state.xml
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc      1015 Jan  8 19:17 memory_monitor_summary.json
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc   1516240 Jan  8 19:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc    575320 Jan  8 19:17 log.47898826._014389.job.log.tgz.1
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc        95 Jan  8 19:19 pilot_heartbeat.json
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc      7778 Jan  8 19:19 heartbeat.json
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc      8192 Jan  8 19:20 boinc_mmap_file
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc        28 Jan  8 19:20 wrapper_checkpoint.txt
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc      5071 Jan  8 19:20 pilotlog.txt
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc   2979027 Jan  8 19:20 log.47898826._014389.job.log.1
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc       357 Jan  8 19:20 output.list
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc       620 Jan  8 19:20 runtime_log
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc   3573760 Jan  8 19:20 result.tar.gz
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc      8833 Jan  8 19:20 runtime_log.err
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc       657 Jan  8 19:20 HQzNDmhopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKqdKDmRHBEgm.diag
[2026-01-08 19:20:31] -rw-r--r--. 1 boinc boinc     20729 Jan  8 19:20 stderr.txt
[2026-01-08 19:20:31] HITS file was successfully produced:
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc 216138190 Jan  8 19:16 shared/HITS.pool.root.1
[2026-01-08 19:20:31]  *** Contents of shared directory: ***
[2026-01-08 19:20:31] total 436464
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc 226607106 Jan  8 13:01 ATLAS.root_0
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:01 start_atlas.sh
[2026-01-08 19:20:31] -rw-r--r--. 2 boinc boinc    592399 Jan  8 13:01 input.tar.gz
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc 216138190 Jan  8 19:16 HITS.pool.root.1
[2026-01-08 19:20:31] -rw-------. 1 boinc boinc   3573760 Jan  8 19:20 result.tar.gz
19:20:32 (11438): run_atlas exited; CPU time 82141.428593
19:20:32 (11438): called boinc_finish(0)

</stderr_txt>
]]>

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