Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:13 (3775418): wrapper (7.7.26015): starting
13:48:13 (3775418): wrapper: running run_atlas (--nthreads 2)
[2026-01-08 13:48:13] Arguments: --nthreads 2
[2026-01-08 13:48:13] Threads: 2
[2026-01-08 13:48:13] Checking for CVMFS
[2026-01-08 13:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:48:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:48:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:48:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:48:13] 2.9.2.0 3553530 1212 55524 154908 2 56 18775307 36864000 0 130560 0 580511 99.984 50576 15614 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 13:48:13] CVMFS is ok
[2026-01-08 13:48:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:48:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:48:13] Further information can be found at the LHC@home message board.
[2026-01-08 13:48:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:48:13] Checking for apptainer binary...
[2026-01-08 13:48:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:48:13] Running /usr/bin/apptainer --version
[2026-01-08 13:48:13] apptainer version 1.4.1-1.1
[2026-01-08 13:48:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:48:13] madmaxA277a
[2026-01-08 13:48:13] apptainer works
[2026-01-08 13:48:13] Set ATHENA_PROC_NUMBER=2
[2026-01-08 13:48:13] Set ATHENA_CORE_NUMBER=2
[2026-01-08 13:48:13] Starting ATLAS job with PandaID=6962319730
[2026-01-08 13:48:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:43:55]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:43:55] NAME="CentOS Linux"
[2026-01-08 16:43:55] VERSION="7 (Core)"
[2026-01-08 16:43:55] ID="centos"
[2026-01-08 16:43:55] ID_LIKE="rhel fedora"
[2026-01-08 16:43:55] VERSION_ID="7"
[2026-01-08 16:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:43:55] ANSI_COLOR="0;31"
[2026-01-08 16:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:43:55] HOME_URL="https://www.centos.org/"
[2026-01-08 16:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:43:55] 
[2026-01-08 16:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:43:55] 
[2026-01-08 16:43:55] 2026-01-08 15:43:24,823 | INFO     | ***************************************
[2026-01-08 16:43:55] 2026-01-08 15:43:25,326 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | INFO     | sufficient remaining disk space (500121468928 B)
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | INFO     | update_server=False
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:43:55] 2026-01-08 15:43:25,339 | INFO     | aborting loop
[2026-01-08 16:43:55] 2026-01-08 15:43:25,839 | INFO     | all data control threads have been joined
[2026-01-08 16:43:55] 2026-01-08 15:43:26,345 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,345 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,346 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,348 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,390 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,779 | INFO     | [job] validate thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,802 | INFO     | all payload control threads have been joined
[2026-01-08 16:43:55] 2026-01-08 15:43:26,845 | INFO     | [data] control thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:26,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:27,027 | INFO     | all job control threads have been joined
[2026-01-08 16:43:55] 2026-01-08 15:43:27,045 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:27,222 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:27,345 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:27,706 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:27,808 | INFO     | [payload] control thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:28,033 | INFO     | [job] control thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:29,346 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:35,864 | INFO     | job.realtimelogging is not enabled
[2026-01-08 16:43:55] 2026-01-08 15:43:36,870 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:43:55] 2026-01-08 15:43:38,799 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:43:55] 2026-01-08 15:43:39,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447837247296)>', '<ExcThread(monitor, started 140447343163136)>']
[2026-01-08 16:43:55] 2026-01-08 15:43:44,568 | INFO     | all workflow threads have been joined
[2026-01-08 16:43:55] 2026-01-08 15:43:44,568 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:43:55] 2026-01-08 15:43:44,569 | INFO     | traces error code: 0
[2026-01-08 16:43:55] 2026-01-08 15:43:44,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:43:55] 2026-01-08 15:43:55,270 | INFO     | PID=3779126 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:43:55] 2026-01-08 15:43:55,270 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:43:55] 2026-01-08 15:43:55,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:43:55] 2026-01-08 15:43:55,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:43:55] 2026-01-08 15:43:55,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:43:55] 2026-01-08 15:43:55,271 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 16:43:55] 2026-01-08 15:43:55,271 | INFO     | [monitor] control thread has ended
[2026-01-08 16:43:55] 2026-01-08 15:43:55,309 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:43:55] 2026-01-08 15:43:55,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:43:55] 2026-01-08 15:43:55,314 [wrapper] pilotpid: 3779126
[2026-01-08 16:43:55] 2026-01-08 15:43:55,316 [wrapper] Pilot exit status: 0
[2026-01-08 16:43:55] 2026-01-08 15:43:55,321 [wrapper] pandaids: 6962319730
[2026-01-08 16:43:55] 2026-01-08 15:43:55,333 [wrapper] cleanup supervisor_pilot 3804712 3779127
[2026-01-08 16:43:55] 2026-01-08 15:43:55,335 [wrapper] Test setup, not cleaning
[2026-01-08 16:43:55] 2026-01-08 15:43:55,337 [wrapper] apfmon messages muted
[2026-01-08 16:43:55] 2026-01-08 15:43:55,339 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:43:55] 2026-01-08 15:43:55,341 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:43:55]  *** Error codes and diagnostics ***
[2026-01-08 16:43:55]     "exeErrorCode": 0,
[2026-01-08 16:43:55]     "exeErrorDiag": "",
[2026-01-08 16:43:55]     "pilotErrorCode": 0,
[2026-01-08 16:43:55]     "pilotErrorDiag": "",
[2026-01-08 16:43:55]  *** Listing of results directory ***
[2026-01-08 16:43:55] total 442092
[2026-01-08 16:43:55] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc       100 Jan  8 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:43:55] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 13:48 run_atlas
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc       105 Jan  8 13:48 job.xml
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc 226336834 Jan  8 13:48 EVNT.47898824._000590.pool.root.1
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc    592395 Jan  8 13:48 input.tar.gz
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:48 start_atlas.sh
[2026-01-08 16:43:55] drwxrwx--x 2 boinc boinc      4096 Jan  8 13:48 shared
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc         0 Jan  8 13:48 boinc_setup_complete
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      6209 Jan  8 13:48 init_data.xml
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc         0 Jan  8 13:48 boinc_lockfile
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      2519 Jan  8 13:48 pandaJob.out
[2026-01-08 16:43:55] -rw------- 1 boinc boinc    989843 Jan  8 13:48 agis_schedconf.cvmfs.json
[2026-01-08 16:43:55] -rw------- 1 boinc boinc   1516240 Jan  8 13:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:43:55] drwx------ 5 boinc boinc      4096 Jan  8 13:48 pilot3
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc       530 Jan  8 16:42 boinc_task_state.xml
[2026-01-08 16:43:55] -rw------- 1 boinc boinc 218837191 Jan  8 16:42 HITS.47898826._013607.pool.root.1
[2026-01-08 16:43:55] -rw------- 1 boinc boinc      1019 Jan  8 16:43 memory_monitor_summary.json
[2026-01-08 16:43:55] -rw------- 1 boinc boinc        95 Jan  8 16:43 pilot_heartbeat.json
[2026-01-08 16:43:55] -rw------- 1 boinc boinc    322888 Jan  8 16:43 log.47898826._013607.job.log.tgz.1
[2026-01-08 16:43:55] -rw------- 1 boinc boinc      7767 Jan  8 16:43 heartbeat.json
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      8192 Jan  8 16:43 boinc_mmap_file
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc        28 Jan  8 16:43 wrapper_checkpoint.txt
[2026-01-08 16:43:55] -rw------- 1 boinc boinc       817 Jan  8 16:43 pilotlog.txt
[2026-01-08 16:43:55] -rw------- 1 boinc boinc   1492161 Jan  8 16:43 log.47898826._013607.job.log.1
[2026-01-08 16:43:55] -rw------- 1 boinc boinc       357 Jan  8 16:43 output.list
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc       620 Jan  8 16:43 runtime_log
[2026-01-08 16:43:55] -rw------- 1 boinc boinc   1832960 Jan  8 16:43 result.tar.gz
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      8923 Jan  8 16:43 runtime_log.err
[2026-01-08 16:43:55] -rw------- 1 boinc boinc       666 Jan  8 16:43 EmOODm5npx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnldKDms2zwmm.diag
[2026-01-08 16:43:55] -rw-r--r-- 1 boinc boinc      8897 Jan  8 16:43 stderr.txt
[2026-01-08 16:43:55] HITS file was successfully produced:
[2026-01-08 16:43:55] -rw------- 1 boinc boinc 218837191 Jan  8 16:42 shared/HITS.pool.root.1
[2026-01-08 16:43:55]  *** Contents of shared directory: ***
[2026-01-08 16:43:55] total 437140
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc 226336834 Jan  8 13:48 ATLAS.root_0
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc    592395 Jan  8 13:48 input.tar.gz
[2026-01-08 16:43:55] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:48 start_atlas.sh
[2026-01-08 16:43:55] -rw------- 1 boinc boinc 218837191 Jan  8 16:42 HITS.pool.root.1
[2026-01-08 16:43:55] -rw------- 1 boinc boinc   1832960 Jan  8 16:43 result.tar.gz
16:43:56 (3775418): run_atlas exited; CPU time 20571.019095
16:43:56 (3775418): called boinc_finish(0)

</stderr_txt>
]]>

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