Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:48:58 (6951): wrapper (7.7.26015): starting
02:48:58 (6951): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 02:48:59] Arguments: --nthreads 8
[2026-01-08 02:48:59] Threads: 8
[2026-01-08 02:48:59] Checking for CVMFS
[2026-01-08 02:48:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 02:49:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 02:49:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 02:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 02:49:05] 2.11.2.0 20999 33334 94832 154886 2 11 13141340 25165825 96 130560 0 14518884 99.808 9195065 3259 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 02:49:05] CVMFS is ok
[2026-01-08 02:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 02:49:05] Checking for apptainer binary...
[2026-01-08 02:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 02:49:05] Running /usr/bin/apptainer --version
[2026-01-08 02:49:05] apptainer version 1.3.2-1.el7
[2026-01-08 02:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 02:50:26] cg-vwn368.simple-grid.lan
[2026-01-08 02:50:26] apptainer works
[2026-01-08 02:50:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 02:50:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 02:50:26] Starting ATLAS job with PandaID=6962318585
[2026-01-08 02:50:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:28:45]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:28:46] 2026-01-08 08:27:50,836 | INFO     | sum of square deviations: 16091695202.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,840 | INFO     | sum of deviations: 244619139142.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,840 | INFO     | mean x: 1767849351.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,841 | INFO     | mean y: 2442312.348525469
[2026-01-08 09:28:46] 2026-01-08 08:27:50,841 | INFO     | intersect: -26871655223.417324
[2026-01-08 09:28:46] 2026-01-08 08:27:50,841 | INFO     | chi2: 10.285894995150912
[2026-01-08 09:28:46] 2026-01-08 08:27:50,842 | INFO     | sum of square deviations: 15453208812.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,847 | INFO     | sum of deviations: 265844164995.5001
[2026-01-08 09:28:46] 2026-01-08 08:27:50,847 | INFO     | mean x: 1767849198.5
[2026-01-08 09:28:46] 2026-01-08 08:27:50,847 | INFO     | mean y: 2447317.4320652173
[2026-01-08 09:28:46] 2026-01-08 08:27:50,847 | INFO     | intersect: -30410161463.745167
[2026-01-08 09:28:46] 2026-01-08 08:27:50,848 | INFO     | chi2: 9.575896766090167
[2026-01-08 09:28:46] 2026-01-08 08:27:50,848 | INFO     | current chi2=9.575896766090167 (change=6.902639288029475 %)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,848 | INFO     | right removable region: 367
[2026-01-08 09:28:46] 2026-01-08 08:27:50,849 | INFO     | sum of square deviations: 15453208812.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,854 | INFO     | sum of deviations: 110868671016.99997
[2026-01-08 09:28:46] 2026-01-08 08:27:50,854 | INFO     | mean x: 1767849503.5
[2026-01-08 09:28:46] 2026-01-08 08:27:50,854 | INFO     | mean y: 2474249.277173913
[2026-01-08 09:28:46] 2026-01-08 08:27:50,854 | INFO     | intersect: -12680919044.34787
[2026-01-08 09:28:46] 2026-01-08 08:27:50,855 | INFO     | chi2: 5.059598520858051
[2026-01-08 09:28:46] 2026-01-08 08:27:50,855 | INFO     | current chi2=5.059598520858051 (change=50.810323037097874 %)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,856 | INFO     | sum of square deviations: 14831839022.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,860 | INFO     | sum of deviations: 2761222523.0000114
[2026-01-08 09:28:46] 2026-01-08 08:27:50,860 | INFO     | mean x: 1767849656.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,860 | INFO     | mean y: 2500769.4077134985
[2026-01-08 09:28:46] 2026-01-08 08:27:50,860 | INFO     | intersect: -326617304.2299807
[2026-01-08 09:28:46] 2026-01-08 08:27:50,861 | INFO     | chi2: 1.855886611449416
[2026-01-08 09:28:46] 2026-01-08 08:27:50,861 | INFO     | current chi2=1.855886611449416 (change=63.31948861557738 %)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,862 | INFO     | sum of square deviations: 14227353269.5
[2026-01-08 09:28:46] 2026-01-08 08:27:50,866 | INFO     | sum of deviations: -48875091640.5
[2026-01-08 09:28:46] 2026-01-08 08:27:50,866 | INFO     | mean x: 1767849808.5
[2026-01-08 09:28:46] 2026-01-08 08:27:50,867 | INFO     | mean y: 2513738.913407821
[2026-01-08 09:28:46] 2026-01-08 08:27:50,867 | INFO     | intersect: 6075591405.601192
[2026-01-08 09:28:46] 2026-01-08 08:27:50,867 | INFO     | chi2: 0.893039113844455
[2026-01-08 09:28:46] 2026-01-08 08:27:50,867 | INFO     | current chi2=0.893039113844455 (change=51.88072868595099 %)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,868 | INFO     | sum of square deviations: 13639518992.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,872 | INFO     | sum of deviations: -52549118316.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,872 | INFO     | mean x: 1767849961.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,873 | INFO     | mean y: 2514678.835694051
[2026-01-08 09:28:46] 2026-01-08 08:27:50,873 | INFO     | intersect: 6813528822.370602
[2026-01-08 09:28:46] 2026-01-08 08:27:50,873 | INFO     | chi2: 0.872164974575176
[2026-01-08 09:28:46] 2026-01-08 08:27:50,873 | INFO     | current chi2=0.872164974575176 (change=2.3374272129490063 %)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,874 | INFO     | left removable region: 40
[2026-01-08 09:28:46] 2026-01-08 08:27:50,874 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,878 | INFO     | sum of deviations: -8975173878.000006
[2026-01-08 09:28:46] 2026-01-08 08:27:50,878 | INFO     | mean x: 1767850388.0
[2026-01-08 09:28:46] 2026-01-08 08:27:50,878 | INFO     | mean y: 2515335.880733945
[2026-01-08 09:28:46] 2026-01-08 08:27:50,878 | INFO     | intersect: 1465941309.2876866
[2026-01-08 09:28:46] 2026-01-08 08:27:50,879 | INFO     | chi2: 0.06548904395840703
[2026-01-08 09:28:46] 2026-01-08 08:27:50,879 | INFO     | current memory leak: -0.83 B/s (using 327 data points, chi2=0.07)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,880 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 09:28:46] 2026-01-08 08:27:50,880 | INFO     | ..............................
[2026-01-08 09:28:46] 2026-01-08 08:27:50,880 | INFO     | . Timing measurements:
[2026-01-08 09:28:46] 2026-01-08 08:27:50,880 | INFO     | . get job = 0 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . initial setup = 18 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . payload setup = 175 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . stage-in = 0 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . payload execution = 22915 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . stage-out = 7 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | . log creation = 1 s
[2026-01-08 09:28:46] 2026-01-08 08:27:50,881 | INFO     | ..............................
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | 
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | job summary report
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | --------------------------------------------------
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | PanDA job id: 6962318585
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | task id: 47898826
[2026-01-08 09:28:46] 2026-01-08 08:27:51,503 | INFO     | errors: (none)
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | pilot state: finished 
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | transexitcode: 0
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | exeerrorcode: 0
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | exeerrordiag: 
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | exitcode: 0
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | exitmsg: OK
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | cpuconsumptiontime: 85531 s
[2026-01-08 09:28:46] 2026-01-08 08:27:51,504 | INFO     | nevents: 400
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | neventsw: 0
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | pid: 17468
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | pgrp: 17468
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | corecount: 8
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | event service: False
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 55: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 98: 2284713, 10
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | --------------------------------------------------
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | 
[2026-01-08 09:28:46] 2026-01-08 08:27:51,505 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-08 09:28:46] 2026-01-08 08:27:51,751 | INFO     | time since job start (23457s) is within the limit (174528.0s)
[2026-01-08 09:28:46] 2026-01-08 08:27:52,098 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,098 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:28:46] 2026-01-08 08:27:52,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,101 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:28:46] 2026-01-08 08:27:52,101 | INFO     | job 6962318585 has completed (purged errors)
[2026-01-08 09:28:46] 2026-01-08 08:27:52,101 | INFO     | overall cleanup function is called
[2026-01-08 09:28:46] 2026-01-08 08:27:53,110 | INFO     | --- collectZombieJob: --- 10, [17468]
[2026-01-08 09:28:46] 2026-01-08 08:27:53,110 | INFO     | zombie collector waiting for pid 17468
[2026-01-08 09:28:46] 2026-01-08 08:27:53,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:28:46] 2026-01-08 08:27:53,110 | INFO     | collected zombie processes
[2026-01-08 09:28:46] 2026-01-08 08:27:53,110 | INFO     | will attempt to kill all subprocesses of pid=17468
[2026-01-08 09:28:46] 2026-01-08 08:27:53,187 | INFO     | process IDs to be killed: [17468] (in reverse order)
[2026-01-08 09:28:46] 2026-01-08 08:27:53,991 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:28:46] 2026-01-08 08:27:53,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:28:46] 2026-01-08 08:27:53,994 | INFO     | did not find any defunct processes belonging to 17468
[2026-01-08 09:28:46] 2026-01-08 08:27:53,996 | INFO     | did not find any defunct processes belonging to 17468
[2026-01-08 09:28:46] 2026-01-08 08:27:53,996 | INFO     | ready for new job
[2026-01-08 09:28:46] 2026-01-08 08:27:53,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:28:46] 2026-01-08 08:27:53,999 | INFO     | ***************************************
[2026-01-08 09:28:46] 2026-01-08 08:27:53,999 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:28:46] 2026-01-08 08:27:53,999 | INFO     | ***************************************
[2026-01-08 09:28:46] 2026-01-08 08:27:53,999 | INFO     | 
[2026-01-08 09:28:46] 2026-01-08 08:27:54,000 | INFO     | pilot is running in a VM
[2026-01-08 09:28:46] 2026-01-08 08:27:54,000 | INFO     | architecture information:
[2026-01-08 09:28:46] 2026-01-08 08:27:54,005 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:28:46] 2026-01-08 08:27:54,326 | INFO     | cat /etc/os-release:
[2026-01-08 09:28:46] NAME="CentOS Linux"
[2026-01-08 09:28:46] VERSION="7 (Core)"
[2026-01-08 09:28:46] ID="centos"
[2026-01-08 09:28:46] ID_LIKE="rhel fedora"
[2026-01-08 09:28:46] VERSION_ID="7"
[2026-01-08 09:28:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:28:46] ANSI_COLOR="0;31"
[2026-01-08 09:28:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:28:46] HOME_URL="https://www.centos.org/"
[2026-01-08 09:28:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:28:46] 
[2026-01-08 09:28:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:28:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:28:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:28:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:28:46] 
[2026-01-08 09:28:46] 2026-01-08 08:27:54,327 | INFO     | ***************************************
[2026-01-08 09:28:46] 2026-01-08 08:27:54,830 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-08 09:28:46] 2026-01-08 08:27:55,082 | INFO     | sufficient remaining disk space (496552116224 B)
[2026-01-08 09:28:46] 2026-01-08 08:27:55,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:28:46] 2026-01-08 08:27:55,083 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:28:46] 2026-01-08 08:27:55,083 | INFO     | update_server=False
[2026-01-08 09:28:46] 2026-01-08 08:27:55,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:28:46] 2026-01-08 08:27:55,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 09:28:46] 2026-01-08 08:27:55,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 09:28:46] 2026-01-08 08:27:55,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:28:46] 2026-01-08 08:27:55,104 | INFO     | will abort loop
[2026-01-08 09:28:46] 2026-01-08 08:27:55,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:28:46] 2026-01-08 08:27:55,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:28:46] 2026-01-08 08:27:55,269 | INFO     | all payload control threads have been joined
[2026-01-08 09:28:46] 2026-01-08 08:27:55,844 | INFO     | all data control threads have been joined
[2026-01-08 09:28:46] 2026-01-08 08:27:56,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:28:46] 2026-01-08 08:27:56,089 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,110 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,275 | INFO     | [payload] control thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,294 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,331 | INFO     | all job control threads have been joined
[2026-01-08 09:28:46] 2026-01-08 08:27:56,439 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,536 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,585 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,634 | INFO     | [job] validate thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,850 | INFO     | [data] control thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:56,908 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:57,027 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:57,073 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:57,122 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:57,337 | INFO     | [job] control thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:57,498 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:27:59,172 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:28:46] 2026-01-08 08:28:24,866 | INFO     | PID=11000 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 09:28:46] 2026-01-08 08:28:24,866 | INFO     | .. there are 2 such processes running
[2026-01-08 09:28:46] 2026-01-08 08:28:24,866 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:28:46] 2026-01-08 08:28:24,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:28:46] 2026-01-08 08:28:24,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:28:46] 2026-01-08 08:28:34,278 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:28:46] 2026-01-08 08:28:35,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020869011264)>', '<ExcThread(monitor, started 140020295923456)>']
[2026-01-08 09:28:46] 2026-01-08 08:28:35,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:28:46] 2026-01-08 08:28:35,932 | INFO     | [monitor] control thread has ended
[2026-01-08 09:28:46] 2026-01-08 08:28:40,872 | INFO     | all workflow threads have been joined
[2026-01-08 09:28:46] 2026-01-08 08:28:40,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:28:46] 2026-01-08 08:28:40,872 | INFO     | traces error code: 0
[2026-01-08 09:28:46] 2026-01-08 08:28:40,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:28:46] 2026-01-08 08:28:41,265 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:28:46] 2026-01-08 08:28:41,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:28:46] 2026-01-08 08:28:41,477 [wrapper] pilotpid: 11000
[2026-01-08 09:28:46] 2026-01-08 08:28:41,600 [wrapper] Pilot exit status: 0
[2026-01-08 09:28:46] 2026-01-08 08:28:42,160 [wrapper] pandaids: 6962318585
[2026-01-08 09:28:46] 2026-01-08 08:28:43,120 [wrapper] cleanup supervisor_pilot 20332 11001
[2026-01-08 09:28:46] 2026-01-08 08:28:43,209 [wrapper] Test setup, not cleaning
[2026-01-08 09:28:46] 2026-01-08 08:28:43,342 [wrapper] apfmon messages muted
[2026-01-08 09:28:46] 2026-01-08 08:28:43,497 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:28:46] 2026-01-08 08:28:43,552 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:28:46]  *** Error codes and diagnostics ***
[2026-01-08 09:28:46]     "exeErrorCode": 0,
[2026-01-08 09:28:46]     "exeErrorDiag": "",
[2026-01-08 09:28:46]     "pilotErrorCode": 0,
[2026-01-08 09:28:46]     "pilotErrorDiag": "",
[2026-01-08 09:28:46]  *** Listing of results directory ***
[2026-01-08 09:28:46] total 443908
[2026-01-08 09:28:46] -rwx------. 1 boinc boinc     36322 Jan  7 21:58 runpilot2-wrapper.sh
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc       100 Jan  8 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:28:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 02:48 run_atlas
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc       105 Jan  8 02:48 job.xml
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc      6389 Jan  8 02:48 init_data.xml
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc 224424061 Jan  8 02:48 EVNT.47898824._000551.pool.root.1
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 02:48 start_atlas.sh
[2026-01-08 09:28:46] drwxrwx--x. 2 boinc boinc        68 Jan  8 02:48 shared
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc    592401 Jan  8 02:48 input.tar.gz
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc         0 Jan  8 02:48 boinc_lockfile
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc      2519 Jan  8 02:50 pandaJob.out
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc    989843 Jan  8 02:56 agis_schedconf.cvmfs.json
[2026-01-08 09:28:46] drwx------. 5 boinc boinc      4096 Jan  8 02:56 pilot3
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc 218843676 Jan  8 09:24 HITS.47898826._012914.pool.root.1
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc       531 Jan  8 09:24 boinc_task_state.xml
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc      1017 Jan  8 09:25 memory_monitor_summary.json
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc   1516240 Jan  8 09:25 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc    589557 Jan  8 09:25 log.47898826._012914.job.log.tgz.1
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc        95 Jan  8 09:27 pilot_heartbeat.json
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc      7782 Jan  8 09:27 heartbeat.json
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc      8192 Jan  8 09:28 boinc_mmap_file
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc        28 Jan  8 09:28 wrapper_checkpoint.txt
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc      5070 Jan  8 09:28 pilotlog.txt
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc   3108215 Jan  8 09:28 log.47898826._012914.job.log.1
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc       357 Jan  8 09:28 output.list
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc       620 Jan  8 09:28 runtime_log
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc   3717120 Jan  8 09:28 result.tar.gz
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc      8817 Jan  8 09:28 runtime_log.err
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc       657 Jan  8 09:28 cDzNDmTnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuniKDmeWPiym.diag
[2026-01-08 09:28:46] -rw-r--r--. 1 boinc boinc     20677 Jan  8 09:28 stderr.txt
[2026-01-08 09:28:46] HITS file was successfully produced:
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc 218843676 Jan  8 09:24 shared/HITS.pool.root.1
[2026-01-08 09:28:46]  *** Contents of shared directory: ***
[2026-01-08 09:28:46] total 437112
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc 224424061 Jan  8 02:48 ATLAS.root_0
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 02:48 start_atlas.sh
[2026-01-08 09:28:46] -rw-r--r--. 2 boinc boinc    592401 Jan  8 02:48 input.tar.gz
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc 218843676 Jan  8 09:24 HITS.pool.root.1
[2026-01-08 09:28:46] -rw-------. 1 boinc boinc   3717120 Jan  8 09:28 result.tar.gz
09:28:47 (6951): run_atlas exited; CPU time 85762.541022
09:28:47 (6951): called boinc_finish(0)

</stderr_txt>
]]>

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