Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:16:20 (3875889): wrapper (7.7.26015): starting
06:16:20 (3875889): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 06:16:20] Arguments: --nthreads 4
[2026-01-08 06:16:20] Threads: 4
[2026-01-08 06:16:20] Checking for CVMFS
[2026-01-08 06:16:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 06:16:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 06:16:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 06:16:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 06:16:21] 2.9.2.0 3794984 206 55124 154893 2 56 28475494 36864001 0 130560 0 142800 99.977 12447 33103 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 06:16:21] CVMFS is ok
[2026-01-08 06:16:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 06:16:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 06:16:21] Further information can be found at the LHC@home message board.
[2026-01-08 06:16:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:16:21] Checking for apptainer binary...
[2026-01-08 06:16:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 06:16:21] Running /usr/bin/apptainer --version
[2026-01-08 06:16:21] apptainer version 1.4.1-1.1
[2026-01-08 06:16:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:16:21] thA365
[2026-01-08 06:16:21] apptainer works
[2026-01-08 06:16:21] Set ATHENA_PROC_NUMBER=4
[2026-01-08 06:16:21] Set ATHENA_CORE_NUMBER=4
[2026-01-08 06:16:21] Starting ATLAS job with PandaID=6962319429
[2026-01-08 06:16:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:57:41]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:57:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-08 07:57:41]  replicas=None
[2026-01-08 07:57:41]  scope=mc23_13p6TeV
[2026-01-08 07:57:41]  status=None
[2026-01-08 07:57:41]  status_code=0
[2026-01-08 07:57:41]  storage_token=
[2026-01-08 07:57:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6962319429/log.47898826._013337.job.log.tgz.1
[2026-01-08 07:57:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/43/log.47898826._013337.job.log.tgz.1
[2026-01-08 07:57:41]  workdir=None
[2026-01-08 07:57:41] ]
[2026-01-08 07:57:41] 2026-01-08 06:56:54,522 | INFO     | transferring file log.47898826._013337.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6962319429/log.47898826._013337.job.log.tgz.1 to /local/data/boinc/
[2026-01-08 07:57:41] 2026-01-08 06:56:54,522 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6962319429/log.47898826._013337.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0133
[2026-01-08 07:57:41] 2026-01-08 06:56:54,540 | INFO     | adding to output.list: log.47898826._013337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/43/log.47898826._013337.job.log.tg
[2026-01-08 07:57:41] 2026-01-08 06:56:54,540 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 07:57:41] 2026-01-08 06:56:54,541 | INFO     | summary of transferred files:
[2026-01-08 07:57:41] 2026-01-08 06:56:54,541 | INFO     |  -- lfn=log.47898826._013337.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 07:57:41] 2026-01-08 06:56:54,541 | INFO     | stage-out finished correctly
[2026-01-08 07:57:41] 2026-01-08 06:56:55,647 | INFO     | time since job start (6026s) is within the limit (174528.0s)
[2026-01-08 07:57:41] 2026-01-08 06:56:55,876 | WARNING  | process 3886319 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 07:57:41] 2026-01-08 06:56:55,876 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6962319429/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:57:41] 2026-01-08 06:56:55,928 | INFO     | number of running child processes to parent process 3886319: 1
[2026-01-08 07:57:41] 2026-01-08 06:56:55,928 | INFO     | maximum number of monitored processes: 6
[2026-01-08 07:57:41] 2026-01-08 06:56:56,123 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 07:57:41] 2026-01-08 06:56:57,653 | INFO     | time since job start (6028s) is within the limit (174528.0s)
[2026-01-08 07:57:41] 2026-01-08 06:56:58,431 | INFO     | monitor loop #461: job 0:6962319429 is in state 'finished'
[2026-01-08 07:57:41] 2026-01-08 06:56:58,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | job 6962319429 has state=finished
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | preparing for final server update for job 6962319429 in state='finished'
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | this job has now completed (state=finished)
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | log transfer has been attempted: DONE
[2026-01-08 07:57:41] 2026-01-08 06:56:59,155 | INFO     | job 6962319429 has finished - writing final server update
[2026-01-08 07:57:41] 2026-01-08 06:56:59,156 | INFO     | total number of processed events: 400 (read)
[2026-01-08 07:57:41] 2026-01-08 06:56:59,156 | INFO     | executing command: lscpu
[2026-01-08 07:57:41] 2026-01-08 06:56:59,175 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 07:57:41] 2026-01-08 06:56:59,660 | INFO     | time since job start (6030s) is within the limit (174528.0s)
[2026-01-08 07:57:41] 2026-01-08 06:57:00,934 | INFO     | monitor loop #462: job 0:6962319429 is in state 'finished'
[2026-01-08 07:57:41] 2026-01-08 06:57:00,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:57:41] 2026-01-08 06:57:01,665 | INFO     | time since job start (6032s) is within the limit (174528.0s)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,460 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:57:41] 2026-01-08 06:57:02,462 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3164.6383124999993
[2026-01-08 07:57:41] 2026-01-08 06:57:02,463 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6962319429/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,464 | INFO     | extracted standard info from prmon json
[2026-01-08 07:57:41] 2026-01-08 06:57:02,464 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:57:41] 2026-01-08 06:57:02,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:57:41] 2026-01-08 06:57:02,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:57:41] 2026-01-08 06:57:02,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | sum of square deviations: 241429643.0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | sum of deviations: -25404145552.5
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | mean x: 1767852491.5
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | mean y: 2616878.054347826
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | intersect: 186022781806.25153
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | chi2: 0.1694002474499592
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | current memory leak: -105.22 B/s (using 92 data points, chi2=0.17)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | could have reported an average CPU frequency of 3638 MHz (7 samples)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | ..............................
[2026-01-08 07:57:41] 2026-01-08 06:57:02,465 | INFO     | . Timing measurements:
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . get job = 0 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . initial setup = 1 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . payload setup = 4 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . stage-in = 0 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . payload execution = 6002 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . stage-out = 0 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | . log creation = 0 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,466 | INFO     | ..............................
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | 
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | job summary report
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | --------------------------------------------------
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | PanDA job id: 6962319429
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | task id: 47898826
[2026-01-08 07:57:41] 2026-01-08 06:57:02,505 | INFO     | errors: (none)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | pilot state: finished 
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | transexitcode: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | exeerrorcode: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | exeerrordiag: 
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | exitcode: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | exitmsg: OK
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | cpuconsumptiontime: 23151 s
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | nevents: 400
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | neventsw: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | pid: 3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | pgrp: 3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | corecount: 4
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | event service: False
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | sizes: {0: 2283972, 3: 2284234, 11: 2284262, 6010: 2311176, 6011: 2320180, 6013: 2320236, 6019: 2320558}
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | --------------------------------------------------
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | 
[2026-01-08 07:57:41] 2026-01-08 06:57:02,506 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-08 07:57:41] 2026-01-08 06:57:02,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | job 6962319429 has completed (purged errors)
[2026-01-08 07:57:41] 2026-01-08 06:57:02,524 | INFO     | overall cleanup function is called
[2026-01-08 07:57:41] 2026-01-08 06:57:03,526 | INFO     | --- collectZombieJob: --- 10, [3886319]
[2026-01-08 07:57:41] 2026-01-08 06:57:03,526 | INFO     | zombie collector waiting for pid 3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:03,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:57:41] 2026-01-08 06:57:03,527 | INFO     | collected zombie processes
[2026-01-08 07:57:41] 2026-01-08 06:57:03,527 | INFO     | will attempt to kill all subprocesses of pid=3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:03,581 | INFO     | process IDs to be killed: [3886319] (in reverse order)
[2026-01-08 07:57:41] 2026-01-08 06:57:03,617 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:57:41] 2026-01-08 06:57:03,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:57:41] 2026-01-08 06:57:03,619 | INFO     | did not find any defunct processes belonging to 3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:03,621 | INFO     | did not find any defunct processes belonging to 3886319
[2026-01-08 07:57:41] 2026-01-08 06:57:03,621 | INFO     | ready for new job
[2026-01-08 07:57:41] 2026-01-08 06:57:03,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | ***************************************
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | ***************************************
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | 
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | architecture information:
[2026-01-08 07:57:41] 2026-01-08 06:57:03,622 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:57:41] 2026-01-08 06:57:03,636 | INFO     | cat /etc/os-release:
[2026-01-08 07:57:41] NAME="CentOS Linux"
[2026-01-08 07:57:41] VERSION="7 (Core)"
[2026-01-08 07:57:41] ID="centos"
[2026-01-08 07:57:41] ID_LIKE="rhel fedora"
[2026-01-08 07:57:41] VERSION_ID="7"
[2026-01-08 07:57:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:57:41] ANSI_COLOR="0;31"
[2026-01-08 07:57:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:57:41] HOME_URL="https://www.centos.org/"
[2026-01-08 07:57:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:57:41] 
[2026-01-08 07:57:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:57:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:57:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:57:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:57:41] 
[2026-01-08 07:57:41] 2026-01-08 06:57:03,636 | INFO     | ***************************************
[2026-01-08 07:57:41] 2026-01-08 06:57:04,139 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-08 07:57:41] 2026-01-08 06:57:04,157 | INFO     | sufficient remaining disk space (20371734528 B)
[2026-01-08 07:57:41] 2026-01-08 06:57:04,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:57:41] 2026-01-08 06:57:04,158 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:57:41] 2026-01-08 06:57:04,158 | INFO     | update_server=False
[2026-01-08 07:57:41] 2026-01-08 06:57:04,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:57:41] 2026-01-08 06:57:04,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:57:41] 2026-01-08 06:57:04,341 | INFO     | all payload control threads have been joined
[2026-01-08 07:57:41] 2026-01-08 06:57:04,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:57:41] 2026-01-08 06:57:04,444 | INFO     | aborting loop
[2026-01-08 07:57:41] 2026-01-08 06:57:04,902 | INFO     | all data control threads have been joined
[2026-01-08 07:57:41] 2026-01-08 06:57:04,945 | INFO     | all job control threads have been joined
[2026-01-08 07:57:41] 2026-01-08 06:57:05,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:57:41] 2026-01-08 06:57:05,163 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,164 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,347 | INFO     | [payload] control thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,398 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,401 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,449 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,487 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,907 | INFO     | [data] control thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:05,951 | INFO     | [job] control thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,166 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,177 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,275 | INFO     | [job] validate thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,347 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,466 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:06,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:57:41] 2026-01-08 06:57:07,099 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:10,678 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:57:41] 2026-01-08 06:57:34,782 | INFO     | PID=3879681 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:57:41] 2026-01-08 06:57:34,782 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:57:41] 2026-01-08 06:57:34,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:57:41] 2026-01-08 06:57:34,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:57:41] 2026-01-08 06:57:34,878 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:57:41] 2026-01-08 06:57:36,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785511724864)>', '<ExcThread(monitor, started 139785230321408)>']
[2026-01-08 07:57:41] 2026-01-08 06:57:36,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:57:41] 2026-01-08 06:57:36,793 | INFO     | [monitor] control thread has ended
[2026-01-08 07:57:41] 2026-01-08 06:57:41,330 | INFO     | all workflow threads have been joined
[2026-01-08 07:57:41] 2026-01-08 06:57:41,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:57:41] 2026-01-08 06:57:41,330 | INFO     | traces error code: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:41,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:57:41] 2026-01-08 06:57:41,404 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:57:41] 2026-01-08 06:57:41,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:57:41] 2026-01-08 06:57:41,412 [wrapper] pilotpid: 3879681
[2026-01-08 07:57:41] 2026-01-08 06:57:41,416 [wrapper] Pilot exit status: 0
[2026-01-08 07:57:41] 2026-01-08 06:57:41,427 [wrapper] pandaids: 6962319429
[2026-01-08 07:57:41] 2026-01-08 06:57:41,451 [wrapper] cleanup supervisor_pilot 3910313 3879682
[2026-01-08 07:57:41] 2026-01-08 06:57:41,455 [wrapper] Test setup, not cleaning
[2026-01-08 07:57:41] 2026-01-08 06:57:41,459 [wrapper] apfmon messages muted
[2026-01-08 07:57:41] 2026-01-08 06:57:41,462 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:57:41] 2026-01-08 06:57:41,466 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:57:41]  *** Error codes and diagnostics ***
[2026-01-08 07:57:41]     "exeErrorCode": 0,
[2026-01-08 07:57:41]     "exeErrorDiag": "",
[2026-01-08 07:57:41]     "pilotErrorCode": 0,
[2026-01-08 07:57:41]     "pilotErrorDiag": "",
[2026-01-08 07:57:41]  *** Listing of results directory ***
[2026-01-08 07:57:41] total 437128
[2026-01-08 07:57:41] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc       100 Jan  8 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:57:41] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 06:16 run_atlas
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc       105 Jan  8 06:16 job.xml
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc 224148119 Jan  8 06:16 EVNT.47898824._000579.pool.root.1
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc    592397 Jan  8 06:16 input.tar.gz
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:16 start_atlas.sh
[2026-01-08 07:57:41] drwxrwx--x 2 boinc boinc      4096 Jan  8 06:16 shared
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 06:16 boinc_setup_complete
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc      6367 Jan  8 06:16 init_data.xml
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 06:16 boinc_lockfile
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc      2519 Jan  8 06:16 pandaJob.out
[2026-01-08 07:57:41] -rw------- 1 boinc boinc    989827 Jan  8 06:16 agis_schedconf.cvmfs.json
[2026-01-08 07:57:41] -rw------- 1 boinc boinc   1516240 Jan  8 06:16 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:57:41] drwx------ 5 boinc boinc      4096 Jan  8 06:16 pilot3
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc       529 Jan  8 07:56 boinc_task_state.xml
[2026-01-08 07:57:41] -rw------- 1 boinc boinc 217216785 Jan  8 07:56 HITS.47898826._013337.pool.root.1
[2026-01-08 07:57:41] -rw------- 1 boinc boinc      1022 Jan  8 07:56 memory_monitor_summary.json
[2026-01-08 07:57:41] -rw------- 1 boinc boinc    298067 Jan  8 07:56 log.47898826._013337.job.log.tgz.1
[2026-01-08 07:57:41] -rw------- 1 boinc boinc      7767 Jan  8 07:57 heartbeat.json
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc        27 Jan  8 07:57 wrapper_checkpoint.txt
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc      8192 Jan  8 07:57 boinc_mmap_file
[2026-01-08 07:57:41] -rw------- 1 boinc boinc        95 Jan  8 07:57 pilot_heartbeat.json
[2026-01-08 07:57:41] -rw------- 1 boinc boinc      4751 Jan  8 07:57 pilotlog.txt
[2026-01-08 07:57:41] -rw------- 1 boinc boinc    874274 Jan  8 07:57 log.47898826._013337.job.log.1
[2026-01-08 07:57:41] -rw------- 1 boinc boinc       357 Jan  8 07:57 output.list
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc       620 Jan  8 07:57 runtime_log
[2026-01-08 07:57:41] -rw------- 1 boinc boinc   1187840 Jan  8 07:57 result.tar.gz
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc      8897 Jan  8 07:57 runtime_log.err
[2026-01-08 07:57:41] -rw------- 1 boinc boinc       659 Jan  8 07:57 kBRLDmunpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSqiKDm71ZLAn.diag
[2026-01-08 07:57:41] -rw-r--r-- 1 boinc boinc     21963 Jan  8 07:57 stderr.txt
[2026-01-08 07:57:41] HITS file was successfully produced:
[2026-01-08 07:57:41] -rw------- 1 boinc boinc 217216785 Jan  8 07:56 shared/HITS.pool.root.1
[2026-01-08 07:57:41]  *** Contents of shared directory: ***
[2026-01-08 07:57:41] total 432788
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc 224148119 Jan  8 06:16 ATLAS.root_0
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc    592397 Jan  8 06:16 input.tar.gz
[2026-01-08 07:57:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:16 start_atlas.sh
[2026-01-08 07:57:41] -rw------- 1 boinc boinc 217216785 Jan  8 07:56 HITS.pool.root.1
[2026-01-08 07:57:41] -rw------- 1 boinc boinc   1187840 Jan  8 07:57 result.tar.gz
07:57:43 (3875889): run_atlas exited; CPU time 23177.269515
07:57:43 (3875889): called boinc_finish(0)

</stderr_txt>
]]>

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