Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:57:46 (3916440): wrapper (7.7.26015): starting
07:57:46 (3916440): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 07:57:46] Arguments: --nthreads 4
[2026-01-08 07:57:46] Threads: 4
[2026-01-08 07:57:46] Checking for CVMFS
[2026-01-08 07:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 07:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 07:57:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 07:57:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 07:57:46] 2.9.2.0 3794984 307 59656 154894 1 56 28487636 36864001 0 130560 0 214178 99.981 13878 27535 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 07:57:46] CVMFS is ok
[2026-01-08 07:57:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 07:57:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 07:57:46] Further information can be found at the LHC@home message board.
[2026-01-08 07:57:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 07:57:46] Checking for apptainer binary...
[2026-01-08 07:57:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 07:57:46] Running /usr/bin/apptainer --version
[2026-01-08 07:57:46] apptainer version 1.4.1-1.1
[2026-01-08 07:57:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 07:57:46] thA365
[2026-01-08 07:57:46] apptainer works
[2026-01-08 07:57:46] Set ATHENA_PROC_NUMBER=4
[2026-01-08 07:57:46] Set ATHENA_CORE_NUMBER=4
[2026-01-08 07:57:46] Starting ATLAS job with PandaID=6962317361
[2026-01-08 07:57:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:39:05]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:39:06]  protocol_id=None
[2026-01-08 09:39:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-08 09:39:06]  replicas=None
[2026-01-08 09:39:06]  scope=mc23_13p6TeV
[2026-01-08 09:39:06]  status=None
[2026-01-08 09:39:06]  status_code=0
[2026-01-08 09:39:06]  storage_token=
[2026-01-08 09:39:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6962317361/log.47898826._012600.job.log.tgz.1
[2026-01-08 09:39:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/85/log.47898826._012600.job.log.tgz.1
[2026-01-08 09:39:06]  workdir=None
[2026-01-08 09:39:06] ]
[2026-01-08 09:39:06] 2026-01-08 08:37:57,309 | INFO     | transferring file log.47898826._012600.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6962317361/log.47898826._012600.job.log.tgz.1 to /local/data/boinc/
[2026-01-08 09:39:06] 2026-01-08 08:37:57,309 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6962317361/log.47898826._012600.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0126
[2026-01-08 09:39:06] 2026-01-08 08:37:57,328 | INFO     | adding to output.list: log.47898826._012600.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/85/log.47898826._012600.job.log.tg
[2026-01-08 09:39:06] 2026-01-08 08:37:57,328 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 09:39:06] 2026-01-08 08:37:57,328 | INFO     | summary of transferred files:
[2026-01-08 09:39:06] 2026-01-08 08:37:57,329 | INFO     |  -- lfn=log.47898826._012600.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 09:39:06] 2026-01-08 08:37:57,329 | INFO     | stage-out finished correctly
[2026-01-08 09:39:06] 2026-01-08 08:37:58,209 | INFO     | monitor loop #459: job 0:6962317361 is in state 'finished'
[2026-01-08 09:39:06] 2026-01-08 08:37:58,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:39:06] 2026-01-08 08:37:58,568 | INFO     | time since job start (6004s) is within the limit (174528.0s)
[2026-01-08 09:39:06] 2026-01-08 08:37:58,884 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 09:39:06] 2026-01-08 08:38:00,468 | INFO     | job 6962317361 has state=finished
[2026-01-08 09:39:06] 2026-01-08 08:38:00,468 | INFO     | preparing for final server update for job 6962317361 in state='finished'
[2026-01-08 09:39:06] 2026-01-08 08:38:00,469 | INFO     | this job has now completed (state=finished)
[2026-01-08 09:39:06] 2026-01-08 08:38:00,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 09:39:06] 2026-01-08 08:38:00,469 | INFO     | log transfer has been attempted: DONE
[2026-01-08 09:39:06] 2026-01-08 08:38:00,469 | INFO     | job 6962317361 has finished - writing final server update
[2026-01-08 09:39:06] 2026-01-08 08:38:00,469 | INFO     | total number of processed events: 400 (read)
[2026-01-08 09:39:06] 2026-01-08 08:38:00,470 | INFO     | executing command: lscpu
[2026-01-08 09:39:06] 2026-01-08 08:38:00,490 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 09:39:06] 2026-01-08 08:38:00,574 | INFO     | time since job start (6006s) is within the limit (174528.0s)
[2026-01-08 09:39:06] 2026-01-08 08:38:00,712 | INFO     | monitor loop #460: job 0:6962317361 is in state 'finished'
[2026-01-08 09:39:06] 2026-01-08 08:38:00,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:39:06] 2026-01-08 08:38:02,579 | INFO     | time since job start (6008s) is within the limit (174528.0s)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,215 | INFO     | monitor loop #461: job 0:6962317361 is in state 'finished'
[2026-01-08 09:39:06] 2026-01-08 08:38:03,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,760 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 09:39:06] 2026-01-08 08:38:03,762 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3402.2812499999995
[2026-01-08 09:39:06] 2026-01-08 08:38:03,763 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6962317361/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,764 | INFO     | extracted standard info from prmon json
[2026-01-08 09:39:06] 2026-01-08 08:38:03,764 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:39:06] 2026-01-08 08:38:03,764 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:39:06] 2026-01-08 08:38:03,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:39:06] 2026-01-08 08:38:03,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | sum of square deviations: 233641590.0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | sum of deviations: -3239386761.0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | mean x: 1767858547.0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | mean y: 2405852.0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | intersect: 24513356888.039845
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | chi2: 0.08025162986859108
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | current memory leak: -13.86 B/s (using 91 data points, chi2=0.08)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | could have reported an average CPU frequency of 3729 MHz (7 samples)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | ..............................
[2026-01-08 09:39:06] 2026-01-08 08:38:03,765 | INFO     | . Timing measurements:
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . get job = 0 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . initial setup = 1 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . payload setup = 4 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . stage-in = 0 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . payload execution = 5980 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . stage-out = 0 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | . log creation = 0 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,766 | INFO     | ..............................
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | 
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | job summary report
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | --------------------------------------------------
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | PanDA job id: 6962317361
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | task id: 47898826
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | errors: (none)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,805 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | pilot state: finished 
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | transexitcode: 0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | exeerrorcode: 0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | exeerrordiag: 
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | exitcode: 0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | exitmsg: OK
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | cpuconsumptiontime: 22881 s
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | nevents: 400
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | neventsw: 0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | pid: 3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | pgrp: 3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | corecount: 4
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | event service: False
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | sizes: {0: 2283971, 4: 2284233, 11: 2284261, 5988: 2311147, 5989: 2320151, 5990: 2320207, 5995: 2320529}
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | --------------------------------------------------
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | 
[2026-01-08 09:39:06] 2026-01-08 08:38:03,806 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | job 6962317361 has completed (purged errors)
[2026-01-08 09:39:06] 2026-01-08 08:38:03,826 | INFO     | overall cleanup function is called
[2026-01-08 09:39:06] 2026-01-08 08:38:04,833 | INFO     | --- collectZombieJob: --- 10, [3926915]
[2026-01-08 09:39:06] 2026-01-08 08:38:04,833 | INFO     | zombie collector waiting for pid 3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:04,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:39:06] 2026-01-08 08:38:04,833 | INFO     | collected zombie processes
[2026-01-08 09:39:06] 2026-01-08 08:38:04,833 | INFO     | will attempt to kill all subprocesses of pid=3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:04,889 | INFO     | process IDs to be killed: [3926915] (in reverse order)
[2026-01-08 09:39:06] 2026-01-08 08:38:04,925 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:39:06] 2026-01-08 08:38:04,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:39:06] 2026-01-08 08:38:04,928 | INFO     | did not find any defunct processes belonging to 3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:04,929 | INFO     | did not find any defunct processes belonging to 3926915
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | ready for new job
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | ***************************************
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | ***************************************
[2026-01-08 09:39:06] 2026-01-08 08:38:04,930 | INFO     | 
[2026-01-08 09:39:06] 2026-01-08 08:38:04,931 | INFO     | architecture information:
[2026-01-08 09:39:06] 2026-01-08 08:38:04,931 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:39:06] 2026-01-08 08:38:04,945 | INFO     | cat /etc/os-release:
[2026-01-08 09:39:06] NAME="CentOS Linux"
[2026-01-08 09:39:06] VERSION="7 (Core)"
[2026-01-08 09:39:06] ID="centos"
[2026-01-08 09:39:06] ID_LIKE="rhel fedora"
[2026-01-08 09:39:06] VERSION_ID="7"
[2026-01-08 09:39:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:39:06] ANSI_COLOR="0;31"
[2026-01-08 09:39:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:39:06] HOME_URL="https://www.centos.org/"
[2026-01-08 09:39:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:39:06] 
[2026-01-08 09:39:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:39:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:39:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:39:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:39:06] 
[2026-01-08 09:39:06] 2026-01-08 08:38:04,945 | INFO     | ***************************************
[2026-01-08 09:39:06] 2026-01-08 08:38:05,448 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | INFO     | sufficient remaining disk space (20137902080 B)
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | INFO     | update_server=False
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:39:06] 2026-01-08 08:38:05,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:39:06] 2026-01-08 08:38:05,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:39:06] 2026-01-08 08:38:05,719 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 09:39:06] 2026-01-08 08:38:05,719 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 09:39:06] 2026-01-08 08:38:05,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:39:06] 2026-01-08 08:38:05,719 | INFO     | will abort loop
[2026-01-08 09:39:06] 2026-01-08 08:38:06,060 | INFO     | all data control threads have been joined
[2026-01-08 09:39:06] 2026-01-08 08:38:06,124 | INFO     | all job control threads have been joined
[2026-01-08 09:39:06] 2026-01-08 08:38:06,471 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:06,471 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:06,608 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:06,723 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:06,724 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:06,936 | INFO     | all payload control threads have been joined
[2026-01-08 09:39:06] 2026-01-08 08:38:06,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,065 | INFO     | [data] control thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,130 | INFO     | [job] control thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,313 | INFO     | [job] validate thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,365 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,453 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,471 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,759 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,942 | INFO     | [payload] control thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:07,948 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:09,472 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:39:06] 2026-01-08 08:38:35,691 | INFO     | PID=3920296 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 09:39:06] 2026-01-08 08:38:35,691 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:39:06] 2026-01-08 08:38:35,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:39:06] 2026-01-08 08:38:35,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:39:06] 2026-01-08 08:39:00,062 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:39:06] 2026-01-08 08:39:00,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997197522752)>', '<ExcThread(monitor, started 139996287702784)>']
[2026-01-08 09:39:06] 2026-01-08 08:39:00,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:39:06] 2026-01-08 08:39:00,822 | INFO     | [monitor] control thread has ended
[2026-01-08 09:39:06] 2026-01-08 08:39:05,814 | INFO     | all workflow threads have been joined
[2026-01-08 09:39:06] 2026-01-08 08:39:05,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:39:06] 2026-01-08 08:39:05,814 | INFO     | traces error code: 0
[2026-01-08 09:39:06] 2026-01-08 08:39:05,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:39:06] 2026-01-08 08:39:05,887 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:39:06] 2026-01-08 08:39:05,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:39:06] 2026-01-08 08:39:05,894 [wrapper] pilotpid: 3920296
[2026-01-08 09:39:06] 2026-01-08 08:39:05,898 [wrapper] Pilot exit status: 0
[2026-01-08 09:39:06] 2026-01-08 08:39:05,910 [wrapper] pandaids: 6962317361
[2026-01-08 09:39:06] 2026-01-08 08:39:05,934 [wrapper] cleanup supervisor_pilot 3953787 3920297
[2026-01-08 09:39:06] 2026-01-08 08:39:05,938 [wrapper] Test setup, not cleaning
[2026-01-08 09:39:06] 2026-01-08 08:39:05,942 [wrapper] apfmon messages muted
[2026-01-08 09:39:06] 2026-01-08 08:39:05,945 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:39:06] 2026-01-08 08:39:05,949 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:39:06]  *** Error codes and diagnostics ***
[2026-01-08 09:39:06]     "exeErrorCode": 0,
[2026-01-08 09:39:06]     "exeErrorDiag": "",
[2026-01-08 09:39:06]     "pilotErrorCode": 0,
[2026-01-08 09:39:06]     "pilotErrorDiag": "",
[2026-01-08 09:39:06]  *** Listing of results directory ***
[2026-01-08 09:39:06] total 433200
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 09:39:06] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc       100 Jan  8 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:39:06] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 07:57 run_atlas
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc       105 Jan  8 07:57 job.xml
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc 223564477 Jan  8 07:57 EVNT.47898824._000535.pool.root.1
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc    592399 Jan  8 07:57 input.tar.gz
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc     15847 Jan  8 07:57 start_atlas.sh
[2026-01-08 09:39:06] drwxrwx--x 2 boinc boinc      4096 Jan  8 07:57 shared
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc         0 Jan  8 07:57 boinc_setup_complete
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc      6367 Jan  8 07:57 init_data.xml
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc         0 Jan  8 07:57 boinc_lockfile
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc      2518 Jan  8 07:57 pandaJob.out
[2026-01-08 09:39:06] -rw------- 1 boinc boinc    989827 Jan  8 07:57 agis_schedconf.cvmfs.json
[2026-01-08 09:39:06] -rw------- 1 boinc boinc   1516240 Jan  8 07:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:39:06] drwx------ 5 boinc boinc      4096 Jan  8 07:57 pilot3
[2026-01-08 09:39:06] -rw------- 1 boinc boinc 213800583 Jan  8 09:37 HITS.47898826._012600.pool.root.1
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc       529 Jan  8 09:37 boinc_task_state.xml
[2026-01-08 09:39:06] -rw------- 1 boinc boinc      1023 Jan  8 09:37 memory_monitor_summary.json
[2026-01-08 09:39:06] -rw------- 1 boinc boinc    284004 Jan  8 09:37 log.47898826._012600.job.log.tgz.1
[2026-01-08 09:39:06] -rw------- 1 boinc boinc      7760 Jan  8 09:38 heartbeat.json
[2026-01-08 09:39:06] -rw------- 1 boinc boinc        95 Jan  8 09:38 pilot_heartbeat.json
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc      8192 Jan  8 09:38 boinc_mmap_file
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc        27 Jan  8 09:38 wrapper_checkpoint.txt
[2026-01-08 09:39:06] -rw------- 1 boinc boinc      4937 Jan  8 09:39 pilotlog.txt
[2026-01-08 09:39:06] -rw------- 1 boinc boinc    870358 Jan  8 09:39 log.47898826._012600.job.log.1
[2026-01-08 09:39:06] -rw------- 1 boinc boinc       357 Jan  8 09:39 output.list
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc       620 Jan  8 09:39 runtime_log
[2026-01-08 09:39:06] -rw------- 1 boinc boinc   1177600 Jan  8 09:39 result.tar.gz
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc      8897 Jan  8 09:39 runtime_log.err
[2026-01-08 09:39:06] -rw------- 1 boinc boinc       659 Jan  8 09:39 URnLDmClpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrkiKDmjsA85m.diag
[2026-01-08 09:39:06] -rw-r--r-- 1 boinc boinc     21838 Jan  8 09:39 stderr.txt
[2026-01-08 09:39:06] HITS file was successfully produced:
[2026-01-08 09:39:06] -rw------- 1 boinc boinc 213800583 Jan  8 09:37 shared/HITS.pool.root.1
[2026-01-08 09:39:06]  *** Contents of shared directory: ***
[2026-01-08 09:39:06] total 428876
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc 223564477 Jan  8 07:57 ATLAS.root_0
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc    592399 Jan  8 07:57 input.tar.gz
[2026-01-08 09:39:06] -rw-r--r-- 2 boinc boinc     15847 Jan  8 07:57 start_atlas.sh
[2026-01-08 09:39:06] -rw------- 1 boinc boinc 213800583 Jan  8 09:37 HITS.pool.root.1
[2026-01-08 09:39:06] -rw------- 1 boinc boinc   1177600 Jan  8 09:39 result.tar.gz
09:39:07 (3916440): run_atlas exited; CPU time 22908.803528
09:39:07 (3916440): called boinc_finish(0)

</stderr_txt>
]]>

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