Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:36:16 (916874): wrapper (7.7.26015): starting
01:36:16 (916874): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 01:36:16] Arguments: --nthreads 4
[2026-01-11 01:36:16] Threads: 4
[2026-01-11 01:36:16] Checking for CVMFS
[2026-01-11 01:36:16] No cvmfs_config command found, will try listing directly
[2026-01-11 01:36:16] CVMFS is ok
[2026-01-11 01:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 01:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 01:36:16] Further information can be found at the LHC@home message board.
[2026-01-11 01:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:36:16] Checking for apptainer binary...
[2026-01-11 01:36:16] which: no apptainer in ((null))
[2026-01-11 01:36:16] apptainer is not installed, using version from CVMFS
[2026-01-11 01:36:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:36:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-11 01:36:16] apptainer works
[2026-01-11 01:36:16] Set ATHENA_PROC_NUMBER=4
[2026-01-11 01:36:16] Set ATHENA_CORE_NUMBER=4
[2026-01-11 01:36:16] Starting ATLAS job with PandaID=6962318747
[2026-01-11 01:36:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:07:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:07:52] 2026-01-11 04:02:18,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 05:07:52] 2026-01-11 04:02:19,177 | INFO     | time since job start (12349s) is within the limit (174528.0s)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,354 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 05:07:52] 2026-01-11 04:02:20,375 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2773.7362187500003
[2026-01-11 05:07:52] 2026-01-11 04:02:20,398 | INFO     | using path: /scratch/boinc/var/slot100/slots/1/PanDA_Pilot-6962318747/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,399 | INFO     | extracted standard info from prmon json
[2026-01-11 05:07:52] 2026-01-11 04:02:20,399 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:07:52] 2026-01-11 04:02:20,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:07:52] 2026-01-11 04:02:20,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:07:52] 2026-01-11 04:02:20,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:07:52] 2026-01-11 04:02:20,403 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:07:52] 2026-01-11 04:02:20,404 | INFO     | sum of square deviations: 2555770710.5
[2026-01-11 05:07:52] 2026-01-11 04:02:20,405 | INFO     | sum of deviations: -5002066184.999999
[2026-01-11 05:07:52] 2026-01-11 04:02:20,405 | INFO     | mean x: 1768097954.5
[2026-01-11 05:07:52] 2026-01-11 04:02:20,405 | INFO     | mean y: 2347164.9603960398
[2026-01-11 05:07:52] 2026-01-11 04:02:20,405 | INFO     | intersect: 3462807429.8962464
[2026-01-11 05:07:52] 2026-01-11 04:02:20,406 | INFO     | chi2: 1.2413188754491362
[2026-01-11 05:07:52] 2026-01-11 04:02:20,406 | INFO     | sum of square deviations: 2370641658.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,407 | INFO     | sum of deviations: -4846810204.999996
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | mean x: 1768097802.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | mean y: 2347292.878172589
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | intersect: 3617248111.5035667
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | chi2: 1.240912396534132
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | current chi2=1.240912396534132 (change=0.032745729001917745 %)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | right removable region: 196
[2026-01-11 05:07:52] 2026-01-11 04:02:20,408 | INFO     | sum of square deviations: 2370641658.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | sum of deviations: -22319947824.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | mean x: 1768098107.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | mean y: 2361127.30964467
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | intersect: 16649270778.448984
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | chi2: 0.08330539739370715
[2026-01-11 05:07:52] 2026-01-11 04:02:20,410 | INFO     | current chi2=0.08330539739370715 (change=93.28896071417866 %)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,411 | INFO     | sum of square deviations: 2194675568.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | sum of deviations: -15504119595.000002
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | mean x: 1768098259.5
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | mean y: 2355260.6979166665
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | intersect: 12492951716.364729
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | chi2: 0.04148133638251599
[2026-01-11 05:07:52] 2026-01-11 04:02:20,412 | INFO     | current chi2=0.04148133638251599 (change=50.20570373553074 %)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,413 | INFO     | sum of square deviations: 2027639878.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,414 | INFO     | sum of deviations: -13201928416.000002
[2026-01-11 05:07:52] 2026-01-11 04:02:20,414 | INFO     | mean x: 1768098412.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,414 | INFO     | mean y: 2353155.604278075
[2026-01-11 05:07:52] 2026-01-11 04:02:20,414 | INFO     | intersect: 11514411544.735683
[2026-01-11 05:07:52] 2026-01-11 04:02:20,414 | INFO     | chi2: 0.040015621036784146
[2026-01-11 05:07:52] 2026-01-11 04:02:20,415 | INFO     | current chi2=0.040015621036784146 (change=3.5334332824186228 %)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,415 | INFO     | left removable region: 30
[2026-01-11 05:07:52] 2026-01-11 04:02:20,415 | INFO     | sum of square deviations: 1418361477.5
[2026-01-11 05:07:52] 2026-01-11 04:02:20,416 | INFO     | sum of deviations: -4396917576.0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,416 | INFO     | mean x: 1768098686.5
[2026-01-11 05:07:52] 2026-01-11 04:02:20,416 | INFO     | mean y: 2344318.3855421687
[2026-01-11 05:07:52] 2026-01-11 04:02:20,416 | INFO     | intersect: 5483446501.502584
[2026-01-11 05:07:52] 2026-01-11 04:02:20,416 | INFO     | chi2: 0.022976081253735514
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | current memory leak: -3.10 B/s (using 166 data points, chi2=0.02)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | could have reported an average CPU frequency of 2734 MHz (10 samples)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | ..............................
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | . Timing measurements:
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | . get job = 0 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,417 | INFO     | . initial setup = 1 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | . payload setup = 8 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | . stage-in = 0 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | . payload execution = 12304 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | . stage-out = 0 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | . log creation = 0 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,418 | INFO     | ..............................
[2026-01-11 05:07:52] 2026-01-11 04:02:20,513 | INFO     | 
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | job summary report
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | --------------------------------------------------
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | PanDA job id: 6962318747
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | task id: 47898826
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | errors: (none)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | pilot state: finished 
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | transexitcode: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,514 | INFO     | exeerrorcode: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | exeerrordiag: 
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | exitcode: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | exitmsg: OK
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | cpuconsumptiontime: 48256 s
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | nevents: 400
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | neventsw: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | pid: 930485
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | pgrp: 930485
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | corecount: 4
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | event service: False
[2026-01-11 05:07:52] 2026-01-11 04:02:20,515 | INFO     | sizes: {0: 2283810, 1: 2284009, 7: 2284271, 11: 2284299, 12316: 2314544, 12318: 2323566, 12321: 2323750, 12332: 2323944}
[2026-01-11 05:07:52] 2026-01-11 04:02:20,516 | INFO     | --------------------------------------------------
[2026-01-11 05:07:52] 2026-01-11 04:02:20,516 | INFO     | 
[2026-01-11 05:07:52] 2026-01-11 04:02:20,516 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/1
[2026-01-11 05:07:52] 2026-01-11 04:02:20,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | job 6962318747 has completed (purged errors)
[2026-01-11 05:07:52] 2026-01-11 04:02:20,548 | INFO     | overall cleanup function is called
[2026-01-11 05:07:52] 2026-01-11 04:02:21,557 | INFO     | --- collectZombieJob: --- 10, [930485]
[2026-01-11 05:07:52] 2026-01-11 04:02:21,558 | INFO     | zombie collector waiting for pid 930485
[2026-01-11 05:07:52] 2026-01-11 04:02:21,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:07:52] 2026-01-11 04:02:21,558 | INFO     | collected zombie processes
[2026-01-11 05:07:52] 2026-01-11 04:02:21,558 | INFO     | will attempt to kill all subprocesses of pid=930485
[2026-01-11 05:07:52] 2026-01-11 04:02:22,245 | INFO     | process IDs to be killed: [930485] (in reverse order)
[2026-01-11 05:07:52] 2026-01-11 04:02:22,495 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:07:52] 2026-01-11 04:02:22,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:07:52] 2026-01-11 04:02:22,525 | INFO     | did not find any defunct processes belonging to 930485
[2026-01-11 05:07:52] 2026-01-11 04:02:22,552 | INFO     | did not find any defunct processes belonging to 930485
[2026-01-11 05:07:52] 2026-01-11 04:02:22,552 | INFO     | ready for new job
[2026-01-11 05:07:52] 2026-01-11 04:02:22,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:07:52] 2026-01-11 04:02:22,555 | INFO     | ***************************************
[2026-01-11 05:07:52] 2026-01-11 04:02:22,555 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:07:52] 2026-01-11 04:02:22,555 | INFO     | ***************************************
[2026-01-11 05:07:52] 2026-01-11 04:02:22,555 | INFO     | 
[2026-01-11 05:07:52] 2026-01-11 04:02:22,563 | INFO     | architecture information:
[2026-01-11 05:07:52] 2026-01-11 04:02:22,563 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:07:52] 2026-01-11 04:02:22,587 | INFO     | cat /etc/os-release:
[2026-01-11 05:07:52] NAME="CentOS Linux"
[2026-01-11 05:07:52] VERSION="7 (Core)"
[2026-01-11 05:07:52] ID="centos"
[2026-01-11 05:07:52] ID_LIKE="rhel fedora"
[2026-01-11 05:07:52] VERSION_ID="7"
[2026-01-11 05:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:07:52] ANSI_COLOR="0;31"
[2026-01-11 05:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:07:52] HOME_URL="https://www.centos.org/"
[2026-01-11 05:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:07:52] 
[2026-01-11 05:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:07:52] 
[2026-01-11 05:07:52] 2026-01-11 04:02:22,587 | INFO     | ***************************************
[2026-01-11 05:07:52] 2026-01-11 04:02:23,090 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/1
[2026-01-11 05:07:52] 2026-01-11 04:02:23,117 | INFO     | sufficient remaining disk space (3346970705920 B)
[2026-01-11 05:07:52] 2026-01-11 04:02:23,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:07:52] 2026-01-11 04:02:23,117 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:07:52] 2026-01-11 04:02:23,117 | INFO     | update_server=False
[2026-01-11 05:07:52] 2026-01-11 04:02:23,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:07:52] 2026-01-11 04:02:23,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:07:52] 2026-01-11 04:02:23,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:07:52] 2026-01-11 04:02:23,118 | INFO     | aborting loop
[2026-01-11 05:07:52] 2026-01-11 04:02:23,558 | INFO     | all data control threads have been joined
[2026-01-11 05:07:52] 2026-01-11 04:02:23,970 | INFO     | all payload control threads have been joined
[2026-01-11 05:07:52] 2026-01-11 04:02:24,103 | INFO     | all job control threads have been joined
[2026-01-11 05:07:52] 2026-01-11 04:02:24,123 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,124 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,290 | INFO     | [job] validate thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,564 | INFO     | [data] control thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,603 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,736 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,975 | INFO     | [payload] control thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:24,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:07:52] 2026-01-11 04:02:25,109 | INFO     | [job] control thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,117 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,124 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,355 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,488 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,518 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:25,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:07:52] 2026-01-11 04:02:26,528 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:28,991 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:07:52] 2026-01-11 04:02:49,849 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:07:52] 2026-01-11 04:02:50,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22711874467648)>', '<ExcThread(monitor, started 22711629727488)>']
[2026-01-11 05:07:52] 2026-01-11 04:02:53,076 | INFO     | PID=922923 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 05:07:52] 2026-01-11 04:02:53,077 | INFO     | .. there are 7 such processes running
[2026-01-11 05:07:52] 2026-01-11 04:02:53,078 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:07:52] 2026-01-11 04:02:53,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:07:52] 2026-01-11 04:02:53,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:07:52] 2026-01-11 04:02:53,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:07:52] 2026-01-11 04:02:53,078 | INFO     | [monitor] control thread has ended
[2026-01-11 05:07:52] 2026-01-11 04:02:55,436 | INFO     | all workflow threads have been joined
[2026-01-11 05:07:52] 2026-01-11 04:02:55,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:07:52] 2026-01-11 04:02:55,436 | INFO     | traces error code: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:55,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:07:52] 2026-01-11 04:02:55,594 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:07:52] 2026-01-11 04:02:55,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:07:52] 2026-01-11 04:02:55,601 [wrapper] pilotpid: 922923
[2026-01-11 05:07:52] 2026-01-11 04:02:55,604 [wrapper] Pilot exit status: 0
[2026-01-11 05:07:52] 2026-01-11 04:02:55,618 [wrapper] pandaids: 6962318747
[2026-01-11 05:07:52] 2026-01-11 04:02:55,788 [wrapper] cleanup supervisor_pilot 1274989 922924
[2026-01-11 05:07:52] 2026-01-11 04:02:55,793 [wrapper] Test setup, not cleaning
[2026-01-11 05:07:52] 2026-01-11 04:02:55,796 [wrapper] apfmon messages muted
[2026-01-11 05:07:52] 2026-01-11 04:02:55,799 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:07:52] 2026-01-11 04:02:55,803 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:07:52]  *** Error codes and diagnostics ***
[2026-01-11 05:07:52]     "exeErrorCode": 0,
[2026-01-11 05:07:52]     "exeErrorDiag": "",
[2026-01-11 05:07:52]     "pilotErrorCode": 0,
[2026-01-11 05:07:52]     "pilotErrorDiag": "",
[2026-01-11 05:07:52]  *** Listing of results directory ***
[2026-01-11 05:07:52] total 440292
[2026-01-11 05:07:52] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc       100 Jan 11 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:07:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 00:38 run_atlas
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc       105 Jan 11 00:38 job.xml
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc 225719178 Jan 11 01:36 EVNT.47898824._000561.pool.root.1
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc      6691 Jan 11 01:36 init_data.xml
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:36 start_atlas.sh
[2026-01-11 05:07:52] drwxrwx--x 2 boinc boinc      4096 Jan 11 01:36 shared
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc    592396 Jan 11 01:36 input.tar.gz
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc         0 Jan 11 01:36 boinc_lockfile
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc      2519 Jan 11 01:36 pandaJob.out
[2026-01-11 05:07:52] -rw------- 1 boinc boinc    989540 Jan 11 01:36 agis_schedconf.cvmfs.json
[2026-01-11 05:07:52] drwx------ 5 boinc boinc      4096 Jan 11 01:36 pilot3
[2026-01-11 05:07:52] -rw------- 1 boinc boinc 217039474 Jan 11 05:01 HITS.47898826._013076.pool.root.1
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc       528 Jan 11 05:01 boinc_task_state.xml
[2026-01-11 05:07:52] -rw------- 1 boinc boinc      1029 Jan 11 05:02 memory_monitor_summary.json
[2026-01-11 05:07:52] -rw------- 1 boinc boinc   1516240 Jan 11 05:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:07:52] -rw------- 1 boinc boinc    374813 Jan 11 05:02 log.47898826._013076.job.log.tgz.1
[2026-01-11 05:07:52] -rw------- 1 boinc boinc      7785 Jan 11 05:02 heartbeat.json
[2026-01-11 05:07:52] -rw------- 1 boinc boinc        95 Jan 11 05:02 pilot_heartbeat.json
[2026-01-11 05:07:52] -rw------- 1 boinc boinc      4834 Jan 11 05:02 pilotlog.txt
[2026-01-11 05:07:52] -rw------- 1 boinc boinc   1716970 Jan 11 05:02 log.47898826._013076.job.log.1
[2026-01-11 05:07:52] -rw------- 1 boinc boinc       357 Jan 11 05:02 output.list
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc       620 Jan 11 05:02 runtime_log
[2026-01-11 05:07:52] -rw------- 1 boinc boinc   2109440 Jan 11 05:02 result.tar.gz
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc      9223 Jan 11 05:02 runtime_log.err
[2026-01-11 05:07:52] -rw------- 1 boinc boinc       667 Jan 11 05:02 Vv6NDmfnpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXidKDmw1wtSm.diag
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc        27 Jan 11 05:07 wrapper_checkpoint.txt
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc      8192 Jan 11 05:07 boinc_mmap_file
[2026-01-11 05:07:52] -rw-r--r-- 1 boinc boinc     20916 Jan 11 05:07 stderr.txt
[2026-01-11 05:07:52] HITS file was successfully produced:
[2026-01-11 05:07:52] -rw------- 1 boinc boinc 217039474 Jan 11 05:01 shared/HITS.pool.root.1
[2026-01-11 05:07:52]  *** Contents of shared directory: ***
[2026-01-11 05:07:52] total 435052
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc 225719178 Jan 11 01:36 ATLAS.root_0
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:36 start_atlas.sh
[2026-01-11 05:07:52] -rw-r--r-- 2 boinc boinc    592396 Jan 11 01:36 input.tar.gz
[2026-01-11 05:07:52] -rw------- 1 boinc boinc 217039474 Jan 11 05:01 HITS.pool.root.1
[2026-01-11 05:07:52] -rw------- 1 boinc boinc   2109440 Jan 11 05:02 result.tar.gz
05:07:53 (916874): run_atlas exited; CPU time 49082.122052
05:07:53 (916874): called boinc_finish(0)

</stderr_txt>
]]>

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