Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:28:45 (5115): wrapper (7.7.26015): starting
09:28:45 (5115): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 09:28:45] Arguments: --nthreads 8
[2026-01-08 09:28:45] Threads: 8
[2026-01-08 09:28:45] Checking for CVMFS
[2026-01-08 09:28:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 09:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 09:28:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 09:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 09:28:48] 2.11.2.0 32209 33718 124732 154897 2 60 19957450 25165825 96 130560 0 16473085 99.819 9792224 4189 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 09:28:48] CVMFS is ok
[2026-01-08 09:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 09:28:48] Checking for apptainer binary...
[2026-01-08 09:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 09:28:48] Running /usr/bin/apptainer --version
[2026-01-08 09:28:48] apptainer version 1.3.2-1.el7
[2026-01-08 09:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 09:28:58] cg-vwn500.simple-grid.lan
[2026-01-08 09:28:58] apptainer works
[2026-01-08 09:28:58] Set ATHENA_PROC_NUMBER=8
[2026-01-08 09:28:58] Set ATHENA_CORE_NUMBER=8
[2026-01-08 09:28:58] Starting ATLAS job with PandaID=6962317303
[2026-01-08 09:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 15:22:45]  *** The last 200 lines of the pilot log: ***
[2026-01-08 15:22:45] 2026-01-08 14:22:07,538 | INFO     | sum of deviations: 187903227153.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,538 | INFO     | mean x: 1767871876.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,538 | INFO     | mean y: 2437476.1626506024
[2026-01-08 15:22:45] 2026-01-08 14:22:07,538 | INFO     | intersect: -29272521225.37449
[2026-01-08 15:22:45] 2026-01-08 14:22:07,539 | INFO     | chi2: 8.972181493140294
[2026-01-08 15:22:45] 2026-01-08 14:22:07,539 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,543 | INFO     | sum of deviations: 206866482043.99997
[2026-01-08 15:22:45] 2026-01-08 14:22:07,543 | INFO     | mean x: 1767871724.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,543 | INFO     | mean y: 2443121.7033639145
[2026-01-08 15:22:45] 2026-01-08 14:22:07,543 | INFO     | intersect: -33728094094.37231
[2026-01-08 15:22:45] 2026-01-08 14:22:07,544 | INFO     | chi2: 8.26400647662961
[2026-01-08 15:22:45] 2026-01-08 14:22:07,544 | INFO     | current chi2=8.26400647662961 (change=7.893008150271151 %)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,544 | INFO     | right removable region: 326
[2026-01-08 15:22:45] 2026-01-08 14:22:07,544 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,548 | INFO     | sum of deviations: 73245440974.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,548 | INFO     | mean x: 1767872029.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,548 | INFO     | mean y: 2472084.1345565747
[2026-01-08 15:22:45] 2026-01-08 14:22:07,548 | INFO     | intersect: -11940538086.042048
[2026-01-08 15:22:45] 2026-01-08 14:22:07,549 | INFO     | chi2: 4.129272264990487
[2026-01-08 15:22:45] 2026-01-08 14:22:07,549 | INFO     | current chi2=4.129272264990487 (change=53.976942306087615 %)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,550 | INFO     | sum of square deviations: 10352419220.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,553 | INFO     | sum of deviations: -18258120145.000008
[2026-01-08 15:22:45] 2026-01-08 14:22:07,553 | INFO     | mean x: 1767872181.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,553 | INFO     | mean y: 2500552.285714286
[2026-01-08 15:22:45] 2026-01-08 14:22:07,553 | INFO     | intersect: 3120421301.3713856
[2026-01-08 15:22:45] 2026-01-08 14:22:07,554 | INFO     | chi2: 1.228540392096722
[2026-01-08 15:22:45] 2026-01-08 14:22:07,554 | INFO     | current chi2=1.228540392096722 (change=70.24801676283866 %)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,555 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,558 | INFO     | sum of deviations: -40448417837.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,558 | INFO     | mean x: 1767872334.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,558 | INFO     | mean y: 2507625.974763407
[2026-01-08 15:22:45] 2026-01-08 14:22:07,558 | INFO     | intersect: 7241873884.207874
[2026-01-08 15:22:45] 2026-01-08 14:22:07,559 | INFO     | chi2: 0.9086890696183151
[2026-01-08 15:22:45] 2026-01-08 14:22:07,559 | INFO     | current chi2=0.9086890696183151 (change=26.035067673479084 %)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,559 | INFO     | sum of square deviations: 9417545878.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,563 | INFO     | sum of deviations: -36600230702.0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,563 | INFO     | mean x: 1767872486.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,563 | INFO     | mean y: 2506333.108974359
[2026-01-08 15:22:45] 2026-01-08 14:22:07,563 | INFO     | intersect: 6873143513.520529
[2026-01-08 15:22:45] 2026-01-08 14:22:07,564 | INFO     | chi2: 0.8923370560310016
[2026-01-08 15:22:45] 2026-01-08 14:22:07,564 | INFO     | current chi2=0.8923370560310016 (change=1.799516923228978 %)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,564 | INFO     | left removable region: 40
[2026-01-08 15:22:45] 2026-01-08 14:22:07,564 | INFO     | sum of square deviations: 7253894147.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,567 | INFO     | sum of deviations: 10116646778.499996
[2026-01-08 15:22:45] 2026-01-08 14:22:07,567 | INFO     | mean x: 1767872913.5
[2026-01-08 15:22:45] 2026-01-08 14:22:07,567 | INFO     | mean y: 2504160.856643357
[2026-01-08 15:22:45] 2026-01-08 14:22:07,567 | INFO     | intersect: -2463060603.5976453
[2026-01-08 15:22:45] 2026-01-08 14:22:07,568 | INFO     | chi2: 0.0008159112040666433
[2026-01-08 15:22:45] 2026-01-08 14:22:07,568 | INFO     | current memory leak: 1.39 B/s (using 286 data points, chi2=0.00)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,569 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,569 | INFO     | ..............................
[2026-01-08 15:22:45] 2026-01-08 14:22:07,569 | INFO     | . Timing measurements:
[2026-01-08 15:22:45] 2026-01-08 14:22:07,569 | INFO     | . get job = 0 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,569 | INFO     | . initial setup = 11 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | . payload setup = 158 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | . stage-in = 0 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | . payload execution = 20402 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | . stage-out = 4 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | . log creation = 1 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,570 | INFO     | ..............................
[2026-01-08 15:22:45] 2026-01-08 14:22:07,899 | INFO     | 
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | job summary report
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | --------------------------------------------------
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | PanDA job id: 6962317303
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | task id: 47898826
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | errors: (none)
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | pilot state: finished 
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | transexitcode: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,900 | INFO     | exeerrorcode: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | exeerrordiag: 
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | exitcode: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | exitmsg: OK
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | cpuconsumptiontime: 76139 s
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | nevents: 400
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | neventsw: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | pid: 15360
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | pgrp: 15360
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | corecount: 8
[2026-01-08 15:22:45] 2026-01-08 14:22:07,901 | INFO     | event service: False
[2026-01-08 15:22:45] 2026-01-08 14:22:07,902 | INFO     | sizes: {0: 2283138, 1: 2283994, 2: 2283994, 12: 2284022, 23: 2284050, 34: 2284078, 44: 2284234, 55: 2284262, 66: 2284290, 77: 2284318, 87: 2284374, 98: 2284682, 10
[2026-01-08 15:22:45] 2026-01-08 14:22:07,902 | INFO     | --------------------------------------------------
[2026-01-08 15:22:45] 2026-01-08 14:22:07,902 | INFO     | 
[2026-01-08 15:22:45] 2026-01-08 14:22:07,902 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 15:22:45] 2026-01-08 14:22:08,115 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,115 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,115 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,117 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 15:22:45] 2026-01-08 14:22:08,118 | INFO     | job 6962317303 has completed (purged errors)
[2026-01-08 15:22:45] 2026-01-08 14:22:08,118 | INFO     | overall cleanup function is called
[2026-01-08 15:22:45] 2026-01-08 14:22:08,597 | INFO     | PID=8864 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 15:22:45] 2026-01-08 14:22:08,597 | INFO     | .. there are 2 such processes running
[2026-01-08 15:22:45] 2026-01-08 14:22:09,126 | INFO     | --- collectZombieJob: --- 10, [15360]
[2026-01-08 15:22:45] 2026-01-08 14:22:09,127 | INFO     | zombie collector waiting for pid 15360
[2026-01-08 15:22:45] 2026-01-08 14:22:09,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 15:22:45] 2026-01-08 14:22:09,127 | INFO     | collected zombie processes
[2026-01-08 15:22:45] 2026-01-08 14:22:09,127 | INFO     | will attempt to kill all subprocesses of pid=15360
[2026-01-08 15:22:45] 2026-01-08 14:22:09,219 | INFO     | process IDs to be killed: [15360] (in reverse order)
[2026-01-08 15:22:45] 2026-01-08 14:22:10,215 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 15:22:45] 2026-01-08 14:22:10,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 15:22:45] 2026-01-08 14:22:10,217 | INFO     | did not find any defunct processes belonging to 15360
[2026-01-08 15:22:45] 2026-01-08 14:22:10,219 | INFO     | did not find any defunct processes belonging to 15360
[2026-01-08 15:22:45] 2026-01-08 14:22:10,219 | INFO     | ready for new job
[2026-01-08 15:22:45] 2026-01-08 14:22:10,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 15:22:45] 2026-01-08 14:22:10,221 | INFO     | ***************************************
[2026-01-08 15:22:45] 2026-01-08 14:22:10,222 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 15:22:45] 2026-01-08 14:22:10,222 | INFO     | ***************************************
[2026-01-08 15:22:45] 2026-01-08 14:22:10,222 | INFO     | 
[2026-01-08 15:22:45] 2026-01-08 14:22:10,222 | INFO     | pilot is running in a VM
[2026-01-08 15:22:45] 2026-01-08 14:22:10,222 | INFO     | architecture information:
[2026-01-08 15:22:45] 2026-01-08 14:22:10,236 | INFO     | executing command: cat /etc/os-release
[2026-01-08 15:22:45] 2026-01-08 14:22:10,572 | INFO     | cat /etc/os-release:
[2026-01-08 15:22:45] NAME="CentOS Linux"
[2026-01-08 15:22:45] VERSION="7 (Core)"
[2026-01-08 15:22:45] ID="centos"
[2026-01-08 15:22:45] ID_LIKE="rhel fedora"
[2026-01-08 15:22:45] VERSION_ID="7"
[2026-01-08 15:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 15:22:45] ANSI_COLOR="0;31"
[2026-01-08 15:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 15:22:45] HOME_URL="https://www.centos.org/"
[2026-01-08 15:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 15:22:45] 
[2026-01-08 15:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 15:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 15:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 15:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 15:22:45] 
[2026-01-08 15:22:45] 2026-01-08 14:22:10,572 | INFO     | ***************************************
[2026-01-08 15:22:45] 2026-01-08 14:22:11,077 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 15:22:45] 2026-01-08 14:22:11,376 | INFO     | sufficient remaining disk space (497084792832 B)
[2026-01-08 15:22:45] 2026-01-08 14:22:11,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 15:22:45] 2026-01-08 14:22:11,376 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 15:22:45] 2026-01-08 14:22:11,377 | INFO     | update_server=False
[2026-01-08 15:22:45] 2026-01-08 14:22:11,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 15:22:45] 2026-01-08 14:22:11,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 15:22:45] 2026-01-08 14:22:11,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 15:22:45] 2026-01-08 14:22:11,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:22:45] 2026-01-08 14:22:11,379 | INFO     | aborting loop
[2026-01-08 15:22:45] 2026-01-08 14:22:11,763 | INFO     | all data control threads have been joined
[2026-01-08 15:22:45] 2026-01-08 14:22:12,062 | INFO     | all payload control threads have been joined
[2026-01-08 15:22:45] 2026-01-08 14:22:12,382 | INFO     | [job] retrieve thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:12,384 | INFO     | [job] job monitor thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:12,496 | INFO     | all job control threads have been joined
[2026-01-08 15:22:45] 2026-01-08 14:22:12,648 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:12,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:22:45] 2026-01-08 14:22:12,769 | INFO     | [data] control thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:12,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,067 | INFO     | [payload] control thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,176 | INFO     | [job] validate thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,383 | INFO     | [data] copytool_out thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,502 | INFO     | [job] control thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,581 | INFO     | [payload] validate_post thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,592 | INFO     | [data] copytool_in thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,610 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,710 | INFO     | [job] queue monitor thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:13,843 | INFO     | [payload] failed_post thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:15,386 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:17,297 | INFO     | [monitor] cgroup control has ended
[2026-01-08 15:22:45] 2026-01-08 14:22:21,817 | INFO     | job.realtimelogging is not enabled
[2026-01-08 15:22:45] 2026-01-08 14:22:22,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 15:22:45] 2026-01-08 14:22:22,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067581441856)>', '<ExcThread(monitor, started 140066978514688)>']
[2026-01-08 15:22:45] 2026-01-08 14:22:27,863 | INFO     | all workflow threads have been joined
[2026-01-08 15:22:45] 2026-01-08 14:22:27,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 15:22:45] 2026-01-08 14:22:27,864 | INFO     | traces error code: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:27,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 15:22:45] 2026-01-08 14:22:40,719 | INFO     | PID=8864 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 15:22:45] 2026-01-08 14:22:40,720 | INFO     | .. there are 2 such processes running
[2026-01-08 15:22:45] 2026-01-08 14:22:40,725 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 15:22:45] 2026-01-08 14:22:40,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 15:22:45] 2026-01-08 14:22:40,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 15:22:45] 2026-01-08 14:22:40,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 15:22:45] 2026-01-08 14:22:40,726 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 15:22:45] 2026-01-08 14:22:40,726 | INFO     | [monitor] control thread has ended
[2026-01-08 15:22:45] 2026-01-08 14:22:41,159 [wrapper] ==== pilot stdout END ====
[2026-01-08 15:22:45] 2026-01-08 14:22:41,248 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 15:22:45] 2026-01-08 14:22:41,367 [wrapper] pilotpid: 8864
[2026-01-08 15:22:45] 2026-01-08 14:22:41,497 [wrapper] Pilot exit status: 0
[2026-01-08 15:22:45] 2026-01-08 14:22:42,020 [wrapper] pandaids: 6962317303
[2026-01-08 15:22:45] 2026-01-08 14:22:42,805 [wrapper] cleanup supervisor_pilot 14644 8865
[2026-01-08 15:22:45] 2026-01-08 14:22:42,860 [wrapper] Test setup, not cleaning
[2026-01-08 15:22:45] 2026-01-08 14:22:42,958 [wrapper] apfmon messages muted
[2026-01-08 15:22:45] 2026-01-08 14:22:43,058 [wrapper] ==== wrapper stdout END ====
[2026-01-08 15:22:45] 2026-01-08 14:22:43,142 [wrapper] ==== wrapper stderr END ====
[2026-01-08 15:22:45]  *** Error codes and diagnostics ***
[2026-01-08 15:22:45]     "exeErrorCode": 0,
[2026-01-08 15:22:45]     "exeErrorDiag": "",
[2026-01-08 15:22:45]     "pilotErrorCode": 0,
[2026-01-08 15:22:45]     "pilotErrorDiag": "",
[2026-01-08 15:22:45]  *** Listing of results directory ***
[2026-01-08 15:22:45] total 451600
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 15:22:45] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc       100 Jan  8 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 15:22:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 09:28 run_atlas
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc       105 Jan  8 09:28 job.xml
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc 226124073 Jan  8 09:28 EVNT.47898824._000532.pool.root.1
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc      6390 Jan  8 09:28 init_data.xml
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 09:28 start_atlas.sh
[2026-01-08 15:22:45] drwxrwx--x. 2 boinc boinc        68 Jan  8 09:28 shared
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc    592393 Jan  8 09:28 input.tar.gz
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc         0 Jan  8 09:28 boinc_lockfile
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc      2517 Jan  8 09:28 pandaJob.out
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc    989819 Jan  8 09:33 agis_schedconf.cvmfs.json
[2026-01-08 15:22:45] drwx------. 5 boinc boinc      4096 Jan  8 09:33 pilot3
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc 225800184 Jan  8 15:18 HITS.47898826._012542.pool.root.1
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc       531 Jan  8 15:19 boinc_task_state.xml
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc      1017 Jan  8 15:20 memory_monitor_summary.json
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc   1516240 Jan  8 15:20 agis_ddmendpoints.agis.ALL.json
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc    528989 Jan  8 15:20 log.47898826._012542.job.log.tgz.1
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc      7778 Jan  8 15:22 heartbeat.json
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc      8192 Jan  8 15:22 boinc_mmap_file
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc        28 Jan  8 15:22 wrapper_checkpoint.txt
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc        95 Jan  8 15:22 pilot_heartbeat.json
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc       889 Jan  8 15:22 pilotlog.txt
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc   2778457 Jan  8 15:22 log.47898826._012542.job.log.1
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc       357 Jan  8 15:22 output.list
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc       620 Jan  8 15:22 runtime_log
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc   3328000 Jan  8 15:22 result.tar.gz
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc      8817 Jan  8 15:22 runtime_log.err
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc       657 Jan  8 15:22 D1qKDmBlpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfedKDmOKKZnm.diag
[2026-01-08 15:22:45] -rw-r--r--. 1 boinc boinc     20669 Jan  8 15:22 stderr.txt
[2026-01-08 15:22:45] HITS file was successfully produced:
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc 225800184 Jan  8 15:18 shared/HITS.pool.root.1
[2026-01-08 15:22:45]  *** Contents of shared directory: ***
[2026-01-08 15:22:45] total 445184
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc 226124073 Jan  8 09:28 ATLAS.root_0
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 09:28 start_atlas.sh
[2026-01-08 15:22:45] -rw-r--r--. 2 boinc boinc    592393 Jan  8 09:28 input.tar.gz
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc 225800184 Jan  8 15:18 HITS.pool.root.1
[2026-01-08 15:22:45] -rw-------. 1 boinc boinc   3328000 Jan  8 15:22 result.tar.gz
15:22:47 (5115): run_atlas exited; CPU time 76338.301515
15:22:47 (5115): called boinc_finish(0)

</stderr_txt>
]]>

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