Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:50:36 (734005): wrapper (7.7.26015): starting
03:50:36 (734005): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 03:50:36] Arguments: --nthreads 4
[2026-01-08 03:50:36] Threads: 4
[2026-01-08 03:50:36] Checking for CVMFS
[2026-01-08 03:50:36] No cvmfs_config command found, will try listing directly
[2026-01-08 03:50:36] CVMFS is ok
[2026-01-08 03:50:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:50:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:50:36] Further information can be found at the LHC@home message board.
[2026-01-08 03:50:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:50:36] Checking for apptainer binary...
[2026-01-08 03:50:36] which: no apptainer in ((null))
[2026-01-08 03:50:36] apptainer is not installed, using version from CVMFS
[2026-01-08 03:50:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:50:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-08 03:50:36] apptainer works
[2026-01-08 03:50:36] Set ATHENA_PROC_NUMBER=4
[2026-01-08 03:50:36] Set ATHENA_CORE_NUMBER=4
[2026-01-08 03:50:36] Starting ATLAS job with PandaID=6962320297
[2026-01-08 03:50:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:29:31]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:29:31] 2026-01-08 06:28:07,863 | INFO     | monitor loop #888: job 0:6962320297 is in state 'finished'
[2026-01-08 07:29:31] 2026-01-08 06:28:07,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:29:31] 2026-01-08 06:28:08,396 | INFO     | time since job start (13036s) is within the limit (174528.0s)
[2026-01-08 07:29:31] 2026-01-08 06:28:10,367 | INFO     | monitor loop #889: job 0:6962320297 is in state 'finished'
[2026-01-08 07:29:31] 2026-01-08 06:28:10,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:29:31] 2026-01-08 06:28:10,402 | INFO     | time since job start (13038s) is within the limit (174528.0s)
[2026-01-08 07:29:31] 2026-01-08 06:28:12,407 | INFO     | time since job start (13040s) is within the limit (174528.0s)
[2026-01-08 07:29:31] 2026-01-08 06:28:12,870 | INFO     | monitor loop #890: job 0:6962320297 is in state 'finished'
[2026-01-08 07:29:31] 2026-01-08 06:28:12,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,419 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:29:31] 2026-01-08 06:28:13,443 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2643.2841953125
[2026-01-08 07:29:31] 2026-01-08 06:28:13,467 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6962320297/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,468 | INFO     | extracted standard info from prmon json
[2026-01-08 07:29:31] 2026-01-08 06:28:13,468 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:29:31] 2026-01-08 06:28:13,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:29:31] 2026-01-08 06:28:13,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:29:31] 2026-01-08 06:28:13,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:29:31] 2026-01-08 06:28:13,473 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:29:31] 2026-01-08 06:28:13,474 | INFO     | sum of square deviations: 2996454322.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,475 | INFO     | sum of deviations: -9386597894.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,475 | INFO     | mean x: 1767847153.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,475 | INFO     | mean y: 2341911.0704225353
[2026-01-08 07:29:31] 2026-01-08 06:28:13,475 | INFO     | intersect: 5540243904.579835
[2026-01-08 07:29:31] 2026-01-08 06:28:13,476 | INFO     | chi2: 1.47109182287217
[2026-01-08 07:29:31] 2026-01-08 06:28:13,476 | INFO     | sum of square deviations: 2790348132.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | sum of deviations: -9308259345.500002
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | mean x: 1767847000.5
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | mean y: 2341969.043269231
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | intersect: 5899662871.443942
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | chi2: 1.4697578521522077
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | current chi2=1.4697578521522077 (change=0.09067895689597313 %)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,478 | INFO     | right removable region: 207
[2026-01-08 07:29:31] 2026-01-08 06:28:13,479 | INFO     | sum of square deviations: 2790348132.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,480 | INFO     | sum of deviations: -29022667626.499996
[2026-01-08 07:29:31] 2026-01-08 06:28:13,480 | INFO     | mean x: 1767847305.5
[2026-01-08 07:29:31] 2026-01-08 06:28:13,480 | INFO     | mean y: 2356166.3990384615
[2026-01-08 07:29:31] 2026-01-08 06:28:13,481 | INFO     | intersect: 18389898628.763767
[2026-01-08 07:29:31] 2026-01-08 06:28:13,481 | INFO     | chi2: 0.2718213089068089
[2026-01-08 07:29:31] 2026-01-08 06:28:13,481 | INFO     | current chi2=0.2718213089068089 (change=81.52247842856586 %)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,481 | INFO     | sum of square deviations: 2593916542.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,483 | INFO     | sum of deviations: -19040973466.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,483 | INFO     | mean x: 1767847458.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,483 | INFO     | mean y: 2348400.1133004925
[2026-01-08 07:29:31] 2026-01-08 06:28:13,483 | INFO     | intersect: 12979456951.86313
[2026-01-08 07:29:31] 2026-01-08 06:28:13,484 | INFO     | chi2: 0.21272096968031803
[2026-01-08 07:29:31] 2026-01-08 06:28:13,484 | INFO     | current chi2=0.21272096968031803 (change=21.74234958406178 %)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,484 | INFO     | left removable region: 20
[2026-01-08 07:29:31] 2026-01-08 06:28:13,484 | INFO     | sum of square deviations: 2027639878.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,485 | INFO     | sum of deviations: 1568301521.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,485 | INFO     | mean x: 1767847580.0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,486 | INFO     | mean y: 2330716.117647059
[2026-01-08 07:29:31] 2026-01-08 06:28:13,486 | INFO     | intersect: -1365031446.5090287
[2026-01-08 07:29:31] 2026-01-08 06:28:13,486 | INFO     | chi2: 0.0004403011916747083
[2026-01-08 07:29:31] 2026-01-08 06:28:13,486 | INFO     | current memory leak: 0.77 B/s (using 187 data points, chi2=0.00)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | could have reported an average CPU frequency of 2650 MHz (11 samples)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | ..............................
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . Timing measurements:
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . get job = 0 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . initial setup = 1 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . payload setup = 9 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . stage-in = 0 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,487 | INFO     | . payload execution = 12996 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,488 | INFO     | . stage-out = 1 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,488 | INFO     | . log creation = 0 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,488 | INFO     | ..............................
[2026-01-08 07:29:31] 2026-01-08 06:28:13,588 | INFO     | 
[2026-01-08 07:29:31] 2026-01-08 06:28:13,588 | INFO     | job summary report
[2026-01-08 07:29:31] 2026-01-08 06:28:13,588 | INFO     | --------------------------------------------------
[2026-01-08 07:29:31] 2026-01-08 06:28:13,588 | INFO     | PanDA job id: 6962320297
[2026-01-08 07:29:31] 2026-01-08 06:28:13,588 | INFO     | task id: 47898826
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | errors: (none)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | pilot state: finished 
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | transexitcode: 0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | exeerrorcode: 0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | exeerrordiag: 
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | exitcode: 0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | exitmsg: OK
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | cpuconsumptiontime: 50105 s
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | nevents: 400
[2026-01-08 07:29:31] 2026-01-08 06:28:13,589 | INFO     | neventsw: 0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | pid: 745696
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | pgrp: 745696
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | corecount: 4
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | event service: False
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | sizes: {0: 2283808, 1: 2284007, 7: 2284269, 12: 2284297, 13010: 2315041, 13012: 2324063, 13014: 2324247, 13023: 2324441}
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | --------------------------------------------------
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | 
[2026-01-08 07:29:31] 2026-01-08 06:28:13,590 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2026-01-08 07:29:31] 2026-01-08 06:28:13,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,622 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:29:31] 2026-01-08 06:28:13,622 | INFO     | job 6962320297 has completed (purged errors)
[2026-01-08 07:29:31] 2026-01-08 06:28:13,622 | INFO     | overall cleanup function is called
[2026-01-08 07:29:31] 2026-01-08 06:28:14,631 | INFO     | --- collectZombieJob: --- 10, [745696]
[2026-01-08 07:29:31] 2026-01-08 06:28:14,631 | INFO     | zombie collector waiting for pid 745696
[2026-01-08 07:29:31] 2026-01-08 06:28:14,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:29:31] 2026-01-08 06:28:14,631 | INFO     | collected zombie processes
[2026-01-08 07:29:31] 2026-01-08 06:28:14,631 | INFO     | will attempt to kill all subprocesses of pid=745696
[2026-01-08 07:29:31] 2026-01-08 06:28:15,349 | INFO     | process IDs to be killed: [745696] (in reverse order)
[2026-01-08 07:29:31] 2026-01-08 06:28:15,592 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:29:31] 2026-01-08 06:28:15,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:29:31] 2026-01-08 06:28:15,625 | INFO     | did not find any defunct processes belonging to 745696
[2026-01-08 07:29:31] 2026-01-08 06:28:15,655 | INFO     | did not find any defunct processes belonging to 745696
[2026-01-08 07:29:31] 2026-01-08 06:28:15,656 | INFO     | ready for new job
[2026-01-08 07:29:31] 2026-01-08 06:28:15,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:29:31] 2026-01-08 06:28:15,658 | INFO     | ***************************************
[2026-01-08 07:29:31] 2026-01-08 06:28:15,658 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:29:31] 2026-01-08 06:28:15,658 | INFO     | ***************************************
[2026-01-08 07:29:31] 2026-01-08 06:28:15,658 | INFO     | 
[2026-01-08 07:29:31] 2026-01-08 06:28:15,667 | INFO     | architecture information:
[2026-01-08 07:29:31] 2026-01-08 06:28:15,667 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:29:31] 2026-01-08 06:28:15,690 | INFO     | cat /etc/os-release:
[2026-01-08 07:29:31] NAME="CentOS Linux"
[2026-01-08 07:29:31] VERSION="7 (Core)"
[2026-01-08 07:29:31] ID="centos"
[2026-01-08 07:29:31] ID_LIKE="rhel fedora"
[2026-01-08 07:29:31] VERSION_ID="7"
[2026-01-08 07:29:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:29:31] ANSI_COLOR="0;31"
[2026-01-08 07:29:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:29:31] HOME_URL="https://www.centos.org/"
[2026-01-08 07:29:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:29:31] 
[2026-01-08 07:29:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:29:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:29:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:29:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:29:31] 
[2026-01-08 07:29:31] 2026-01-08 06:28:15,690 | INFO     | ***************************************
[2026-01-08 07:29:31] 2026-01-08 06:28:16,193 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2026-01-08 07:29:31] 2026-01-08 06:28:16,219 | INFO     | sufficient remaining disk space (3343025963008 B)
[2026-01-08 07:29:31] 2026-01-08 06:28:16,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:29:31] 2026-01-08 06:28:16,222 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:29:31] 2026-01-08 06:28:16,222 | INFO     | update_server=False
[2026-01-08 07:29:31] 2026-01-08 06:28:16,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:29:31] 2026-01-08 06:28:16,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:29:31] 2026-01-08 06:28:16,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:29:31] 2026-01-08 06:28:16,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:29:31] 2026-01-08 06:28:16,378 | INFO     | aborting loop
[2026-01-08 07:29:31] 2026-01-08 06:28:16,887 | INFO     | all data control threads have been joined
[2026-01-08 07:29:31] 2026-01-08 06:28:17,204 | INFO     | all payload control threads have been joined
[2026-01-08 07:29:31] 2026-01-08 06:28:17,223 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,242 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,273 | INFO     | [job] validate thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,383 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,445 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,514 | INFO     | all job control threads have been joined
[2026-01-08 07:29:31] 2026-01-08 06:28:17,555 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,657 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:17,889 | INFO     | [data] control thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,064 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,153 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,209 | INFO     | [payload] control thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,228 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,517 | INFO     | [job] control thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:18,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:29:31] 2026-01-08 06:28:18,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:19,596 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:20,229 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:29:31] 2026-01-08 06:28:46,470 | INFO     | PID=738333 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:29:31] 2026-01-08 06:28:46,470 | INFO     | .. there are 5 such processes running
[2026-01-08 07:29:31] 2026-01-08 06:28:46,471 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:29:31] 2026-01-08 06:28:46,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:29:31] 2026-01-08 06:28:46,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:29:31] 2026-01-08 06:29:12,452 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:29:31] 2026-01-08 06:29:12,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22565580416832)>', '<ExcThread(monitor, started 22565345007360)>']
[2026-01-08 07:29:31] 2026-01-08 06:29:13,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:29:31] 2026-01-08 06:29:13,601 | INFO     | [monitor] control thread has ended
[2026-01-08 07:29:31] 2026-01-08 06:29:18,023 | INFO     | all workflow threads have been joined
[2026-01-08 07:29:31] 2026-01-08 06:29:18,024 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:29:31] 2026-01-08 06:29:18,024 | INFO     | traces error code: 0
[2026-01-08 07:29:31] 2026-01-08 06:29:18,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:29:31] 2026-01-08 06:29:18,164 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:29:31] 2026-01-08 06:29:18,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:29:31] 2026-01-08 06:29:18,172 [wrapper] pilotpid: 738333
[2026-01-08 07:29:31] 2026-01-08 06:29:18,176 [wrapper] Pilot exit status: 0
[2026-01-08 07:29:31] 2026-01-08 06:29:18,192 [wrapper] pandaids: 6962320297
[2026-01-08 07:29:31] 2026-01-08 06:29:18,378 [wrapper] cleanup supervisor_pilot 1016663 738334
[2026-01-08 07:29:31] 2026-01-08 06:29:18,381 [wrapper] Test setup, not cleaning
[2026-01-08 07:29:31] 2026-01-08 06:29:18,384 [wrapper] apfmon messages muted
[2026-01-08 07:29:31] 2026-01-08 06:29:18,387 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:29:31] 2026-01-08 06:29:18,390 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:29:31]  *** Error codes and diagnostics ***
[2026-01-08 07:29:31]     "exeErrorCode": 0,
[2026-01-08 07:29:31]     "exeErrorDiag": "",
[2026-01-08 07:29:31]     "pilotErrorCode": 0,
[2026-01-08 07:29:31]     "pilotErrorDiag": "",
[2026-01-08 07:29:31]  *** Listing of results directory ***
[2026-01-08 07:29:31] total 438680
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 07:29:31] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc       100 Jan  8 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:29:31] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 02:53 run_atlas
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc       105 Jan  8 02:53 job.xml
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc 224048982 Jan  8 03:50 EVNT.47898824._000613.pool.root.1
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc      6689 Jan  8 03:50 init_data.xml
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc     15847 Jan  8 03:50 start_atlas.sh
[2026-01-08 07:29:31] drwxrwx--x 2 boinc boinc      4096 Jan  8 03:50 shared
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc    592393 Jan  8 03:50 input.tar.gz
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc         0 Jan  8 03:50 boinc_lockfile
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc      2518 Jan  8 03:50 pandaJob.out
[2026-01-08 07:29:31] -rw------- 1 boinc boinc    989843 Jan  8 03:50 agis_schedconf.cvmfs.json
[2026-01-08 07:29:31] drwx------ 5 boinc boinc      4096 Jan  8 03:50 pilot3
[2026-01-08 07:29:31] -rw------- 1 boinc boinc 216875997 Jan  8 07:27 HITS.47898826._014143.pool.root.1
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc       529 Jan  8 07:27 boinc_task_state.xml
[2026-01-08 07:29:31] -rw------- 1 boinc boinc      1028 Jan  8 07:27 memory_monitor_summary.json
[2026-01-08 07:29:31] -rw------- 1 boinc boinc        95 Jan  8 07:28 pilot_heartbeat.json
[2026-01-08 07:29:31] -rw------- 1 boinc boinc   1516240 Jan  8 07:28 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:29:31] -rw------- 1 boinc boinc    374964 Jan  8 07:28 log.47898826._014143.job.log.tgz.1
[2026-01-08 07:29:31] -rw------- 1 boinc boinc      7784 Jan  8 07:28 heartbeat.json
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc        27 Jan  8 07:29 wrapper_checkpoint.txt
[2026-01-08 07:29:31] -rw------- 1 boinc boinc      4835 Jan  8 07:29 pilotlog.txt
[2026-01-08 07:29:31] -rw------- 1 boinc boinc   1808095 Jan  8 07:29 log.47898826._014143.job.log.1
[2026-01-08 07:29:31] -rw------- 1 boinc boinc       357 Jan  8 07:29 output.list
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc       620 Jan  8 07:29 runtime_log
[2026-01-08 07:29:31] -rw------- 1 boinc boinc   2201600 Jan  8 07:29 result.tar.gz
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc      9223 Jan  8 07:29 runtime_log.err
[2026-01-08 07:29:31] -rw------- 1 boinc boinc       666 Jan  8 07:29 InhKDm9kpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkcdKDmf6kMmm.diag
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc      8192 Jan  8 07:29 boinc_mmap_file
[2026-01-08 07:29:31] -rw-r--r-- 1 boinc boinc     21119 Jan  8 07:29 stderr.txt
[2026-01-08 07:29:31] HITS file was successfully produced:
[2026-01-08 07:29:31] -rw------- 1 boinc boinc 216875997 Jan  8 07:27 shared/HITS.pool.root.1
[2026-01-08 07:29:31]  *** Contents of shared directory: ***
[2026-01-08 07:29:31] total 433352
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc 224048982 Jan  8 03:50 ATLAS.root_0
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc     15847 Jan  8 03:50 start_atlas.sh
[2026-01-08 07:29:31] -rw-r--r-- 2 boinc boinc    592393 Jan  8 03:50 input.tar.gz
[2026-01-08 07:29:31] -rw------- 1 boinc boinc 216875997 Jan  8 07:27 HITS.pool.root.1
[2026-01-08 07:29:31] -rw------- 1 boinc boinc   2201600 Jan  8 07:29 result.tar.gz
07:29:32 (734005): run_atlas exited; CPU time 51068.442719
07:29:32 (734005): called boinc_finish(0)

</stderr_txt>
]]>

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