Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:38 (3332597): wrapper (7.7.26015): starting
17:31:38 (3332597): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 17:31:38] Arguments: --nthreads 12
[2026-01-07 17:31:38] Threads: 12
[2026-01-07 17:31:38] Checking for CVMFS
[2026-01-07 17:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 17:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 17:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 17:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 17:31:40] 2.11.5.0 1774115 54480 219608 154886 0 421 44461747 45568000 19004 130560 0 333296893 99.771 224257568 18061 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-07 17:31:40] CVMFS is ok
[2026-01-07 17:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 17:31:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 17:31:40] Further information can be found at the LHC@home message board.
[2026-01-07 17:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 17:31:40] Checking for apptainer binary...
[2026-01-07 17:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 17:31:40] Running /usr/bin/apptainer --version
[2026-01-07 17:31:40] apptainer version 1.4.1-1.el9
[2026-01-07 17:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 17:31:41] wns0089.triumf.lcg
[2026-01-07 17:31:41] apptainer works
[2026-01-07 17:31:41] Set ATHENA_PROC_NUMBER=12
[2026-01-07 17:31:41] Set ATHENA_CORE_NUMBER=12
[2026-01-07 17:31:41] Starting ATLAS job with PandaID=6962323775
[2026-01-07 17:31:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 17:36:40]  *** The last 200 lines of the pilot log: ***
[2026-01-07 17:36:40] 2026-01-08 01:36:06,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | wrong length of table data, x=[1767836006.0], y=[1094.0] (must be same and length>=4)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . Timing measurements:
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . get job = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . initial setup = 3 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload setup = 19 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-in = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload execution = 34 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-out = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . log creation = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962323775/pilotlog.txt
[2026-01-07 17:36:40] 2026-01-08 01:36:06,235 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-07 17:36:40] - Log from pilotlog.txt -
[2026-01-07 17:36:40] 2026-01-08 01:36:06,085 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962323775/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,086 | INFO     | extracted standard info from prmon json
[2026-01-07 17:36:40] 2026-01-08 01:36:06,104 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 17:36:40] 2026-01-08 01:36:06,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | wrong length of table data, x=[1767836006.0], y=[1094.0] (must be same and length>=4)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . Timing measurements:
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . get job = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . initial setup = 3 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload setup = 19 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-in = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload execution = 34 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-out = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . log creation = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962323775/pilotlog.txt
[2026-01-07 17:36:40] 2026-01-08 01:36:06,236 | WARNING  | 
[2026-01-07 17:36:40] [begin log extracts]
[2026-01-07 17:36:40] - Log from pilotlog.txt -
[2026-01-07 17:36:40] 2026-01-08 01:36:06,085 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962323775/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,086 | INFO     | extracted standard info from prmon json
[2026-01-07 17:36:40] 2026-01-08 01:36:06,104 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 17:36:40] 2026-01-08 01:36:06,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | WARNING  | wrong length of table data, x=[1767836006.0], y=[1094.0] (must be same and length>=4)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | could have reported an average CPU frequency of 2785 MHz (4 samples)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . Timing measurements:
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . get job = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,105 | INFO     | . initial setup = 3 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload setup = 19 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-in = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . payload execution = 34 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . stage-out = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | . log creation = 0 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | ..............................
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 17:36:40] 2026-01-08 01:36:06,106 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962323775/pilotlog.txt
[2026-01-07 17:36:40] [end log extracts]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,236 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,237 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | 
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | job summary report
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | --------------------------------------------------
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | PanDA job id: 6962323775
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | task id: 47898826
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-07 17:33:39,672 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 17:36:40] 2026-01-08 01:36:06,436 | INFO     | pilot state: failed 
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | transexitcode: 65
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | exeerrorcode: 65
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | exitcode: 65
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | cpuconsumptiontime: 16 s
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | nevents: 0
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | neventsw: 0
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | pid: 3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | pgrp: 3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | corecount: 12
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | event service: False
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | sizes: {0: 2283966, 11: 2283966, 19: 2284256, 22: 2284284, 58: 2307536, 60: 2311984, 196: 2312122}
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | --------------------------------------------------
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | 
[2026-01-07 17:36:40] 2026-01-08 01:36:06,437 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-07 17:36:40] 2026-01-08 01:36:06,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,610 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 17:36:40] 2026-01-08 01:36:06,611 | INFO     | job 6962323775 has completed (purged errors)
[2026-01-07 17:36:40] 2026-01-08 01:36:06,611 | INFO     | overall cleanup function is called
[2026-01-07 17:36:40] 2026-01-08 01:36:07,617 | INFO     | --- collectZombieJob: --- 10, [3352419]
[2026-01-07 17:36:40] 2026-01-08 01:36:07,617 | INFO     | zombie collector waiting for pid 3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:07,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 17:36:40] 2026-01-08 01:36:07,617 | INFO     | collected zombie processes
[2026-01-07 17:36:40] 2026-01-08 01:36:07,617 | INFO     | will attempt to kill all subprocesses of pid=3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:08,566 | INFO     | process IDs to be killed: [3352419] (in reverse order)
[2026-01-07 17:36:40] 2026-01-08 01:36:08,899 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 17:36:40] 2026-01-08 01:36:08,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 17:36:40] 2026-01-08 01:36:08,916 | INFO     | did not find any defunct processes belonging to 3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:08,925 | INFO     | did not find any defunct processes belonging to 3352419
[2026-01-07 17:36:40] 2026-01-08 01:36:08,926 | INFO     | ready for new job
[2026-01-07 17:36:40] 2026-01-08 01:36:08,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 17:36:40] 2026-01-08 01:36:08,927 | INFO     | ***************************************
[2026-01-07 17:36:40] 2026-01-08 01:36:08,927 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 17:36:40] 2026-01-08 01:36:08,927 | INFO     | ***************************************
[2026-01-07 17:36:40] 2026-01-08 01:36:08,927 | INFO     | 
[2026-01-07 17:36:40] 2026-01-08 01:36:08,929 | INFO     | architecture information:
[2026-01-07 17:36:40] 2026-01-08 01:36:08,929 | INFO     | executing command: cat /etc/os-release
[2026-01-07 17:36:40] 2026-01-08 01:36:08,940 | INFO     | cat /etc/os-release:
[2026-01-07 17:36:40] NAME="CentOS Linux"
[2026-01-07 17:36:40] VERSION="7 (Core)"
[2026-01-07 17:36:40] ID="centos"
[2026-01-07 17:36:40] ID_LIKE="rhel fedora"
[2026-01-07 17:36:40] VERSION_ID="7"
[2026-01-07 17:36:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 17:36:40] ANSI_COLOR="0;31"
[2026-01-07 17:36:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 17:36:40] HOME_URL="https://www.centos.org/"
[2026-01-07 17:36:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 17:36:40] 
[2026-01-07 17:36:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 17:36:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 17:36:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 17:36:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 17:36:40] 
[2026-01-07 17:36:40] 2026-01-08 01:36:08,940 | INFO     | ***************************************
[2026-01-07 17:36:40] 2026-01-08 01:36:09,444 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-07 17:36:40] 2026-01-08 01:36:09,458 | INFO     | sufficient remaining disk space (2097853497344 B)
[2026-01-07 17:36:40] 2026-01-08 01:36:09,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 17:36:40] 2026-01-08 01:36:09,459 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 17:36:40] 2026-01-08 01:36:09,459 | INFO     | update_server=False
[2026-01-07 17:36:40] 2026-01-08 01:36:09,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 17:36:40] 2026-01-08 01:36:09,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 17:36:40] 2026-01-08 01:36:09,460 | INFO     | aborting loop
[2026-01-07 17:36:40] 2026-01-08 01:36:09,577 | INFO     | all data control threads have been joined
[2026-01-07 17:36:40] 2026-01-08 01:36:09,804 | INFO     | all job control threads have been joined
[2026-01-07 17:36:40] 2026-01-08 01:36:10,466 | INFO     | [job] job monitor thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,467 | INFO     | [job] retrieve thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,583 | INFO     | [data] control thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,668 | INFO     | [job] validate thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,672 | INFO     | all payload control threads have been joined
[2026-01-07 17:36:40] 2026-01-08 01:36:10,810 | INFO     | [job] control thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,837 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:10,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 17:36:40] 2026-01-08 01:36:11,004 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:11,215 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:11,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 17:36:40] 2026-01-08 01:36:11,238 | INFO     | [payload] validate_post thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:11,367 | INFO     | [data] copytool_in thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:11,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 17:36:40] 2026-01-08 01:36:11,620 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:11,681 | INFO     | [payload] control thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:12,050 | INFO     | [payload] failed_post thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:12,482 | INFO     | [job] queue monitor thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:12,617 | INFO     | [monitor] cgroup control has ended
[2026-01-07 17:36:40] 2026-01-08 01:36:12,858 | INFO     | [data] copytool_out thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:15,240 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 17:36:40] 2026-01-08 01:36:15,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879461840704)>', '<ExcThread(monitor, started 139879048517376)>']
[2026-01-07 17:36:40] 2026-01-08 01:36:20,962 | INFO     | all workflow threads have been joined
[2026-01-07 17:36:40] 2026-01-08 01:36:20,963 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 17:36:40] 2026-01-08 01:36:20,963 | INFO     | traces error code: 0
[2026-01-07 17:36:40] 2026-01-08 01:36:20,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 17:36:40] 2026-01-08 01:36:39,437 | INFO     | PID=3340721 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-07 17:36:40] 2026-01-08 01:36:39,437 | INFO     | .. there are 49 such processes running
[2026-01-07 17:36:40] 2026-01-08 01:36:39,438 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 17:36:40] 2026-01-08 01:36:39,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 17:36:40] 2026-01-08 01:36:39,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 17:36:40] 2026-01-08 01:36:39,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 17:36:40] 2026-01-08 01:36:39,438 | INFO     | [monitor] control thread has ended
[2026-01-07 17:36:40] 2026-01-08 01:36:39,559 [wrapper] ==== pilot stdout END ====
[2026-01-07 17:36:40] 2026-01-08 01:36:39,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 17:36:40] 2026-01-08 01:36:39,576 [wrapper] pilotpid: 3340721
[2026-01-07 17:36:40] 2026-01-08 01:36:39,584 [wrapper] Pilot exit status: 0
[2026-01-07 17:36:40] 2026-01-08 01:36:39,649 [wrapper] pandaids: 6962323775
[2026-01-07 17:36:40] 2026-01-08 01:36:39,987 [wrapper] cleanup supervisor_pilot 3340730 3340722
[2026-01-07 17:36:40] 2026-01-08 01:36:39,990 [wrapper] Test setup, not cleaning
[2026-01-07 17:36:40] 2026-01-08 01:36:39,998 [wrapper] apfmon messages muted
[2026-01-07 17:36:40] 2026-01-08 01:36:40,005 [wrapper] ==== wrapper stdout END ====
[2026-01-07 17:36:40] 2026-01-08 01:36:40,007 [wrapper] ==== wrapper stderr END ====
[2026-01-07 17:36:40]  *** Error codes and diagnostics ***
[2026-01-07 17:36:40]     "exeErrorCode": 65,
[2026-01-07 17:36:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 17:36:40]     "pilotErrorCode": 1305,
[2026-01-07 17:36:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 17:36:40]  *** Listing of results directory ***
[2026-01-07 17:36:40] total 224444
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc    579449 Jan  7 13:00 pilot3.tar.gz
[2026-01-07 17:36:40] -rwx------. 1 boinc boinc     36322 Jan  7 13:09 runpilot2-wrapper.sh
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc      5112 Jan  7 13:16 queuedata.json
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc       100 Jan  7 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 17:36:40] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 17:31 run_atlas
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc       105 Jan  7 17:31 job.xml
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc      6595 Jan  7 17:31 init_data.xml
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc 225694064 Jan  7 17:31 EVNT.47898824._000760.pool.root.1
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc     15847 Jan  7 17:31 start_atlas.sh
[2026-01-07 17:36:40] drwxrwx--x. 2 boinc boinc      4096 Jan  7 17:31 shared
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc    592400 Jan  7 17:31 input.tar.gz
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc         0 Jan  7 17:31 boinc_lockfile
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc      2519 Jan  7 17:31 pandaJob.out
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc    989843 Jan  7 17:32 agis_schedconf.cvmfs.json
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc   1516240 Jan  7 17:32 agis_ddmendpoints.agis.ALL.json
[2026-01-07 17:36:40] drwx------. 5 boinc boinc      4096 Jan  7 17:32 pilot3
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc       952 Jan  7 17:33 memory_monitor_summary.json
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc     21745 Jan  7 17:33 log.47898826._016400.job.log.tgz.1
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc      8419 Jan  7 17:36 heartbeat.json
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc       524 Jan  7 17:36 boinc_task_state.xml
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc      8192 Jan  7 17:36 boinc_mmap_file
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc        22 Jan  7 17:36 wrapper_checkpoint.txt
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc        95 Jan  7 17:36 pilot_heartbeat.json
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc       823 Jan  7 17:36 pilotlog.txt
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc     91068 Jan  7 17:36 log.47898826._016400.job.log.1
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc       188 Jan  7 17:36 output.list
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc       620 Jan  7 17:36 runtime_log
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc    133120 Jan  7 17:36 result.tar.gz
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc      8636 Jan  7 17:36 runtime_log.err
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc       644 Jan  7 17:36 5jcNDmoxpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPEjKDmULOFRm.diag
[2026-01-07 17:36:40] -rw-r--r--. 1 boinc boinc     21781 Jan  7 17:36 stderr.txt
[2026-01-07 17:36:40] No HITS result produced
[2026-01-07 17:36:40]  *** Contents of shared directory: ***
[2026-01-07 17:36:40] total 221136
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc 225694064 Jan  7 17:31 ATLAS.root_0
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc     15847 Jan  7 17:31 start_atlas.sh
[2026-01-07 17:36:40] -rw-r--r--. 2 boinc boinc    592400 Jan  7 17:31 input.tar.gz
[2026-01-07 17:36:40] -rw-------. 1 boinc boinc    133120 Jan  7 17:36 result.tar.gz
17:36:41 (3332597): run_atlas exited; CPU time 26.369819
17:36:41 (3332597): called boinc_finish(0)

</stderr_txt>
]]>

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