Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:04:59 (1996965): wrapper (7.7.26015): starting
21:04:59 (1996965): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 21:04:59] Arguments: --nthreads 8
[2026-01-07 21:04:59] Threads: 8
[2026-01-07 21:04:59] Checking for CVMFS
[2026-01-07 21:04:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 21:04:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 21:04:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 21:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 21:04:59] 2.13.3.0 290515 94104 580232 154886 3 346 25793560 40960000 11796 16776704 0 299567454 99.611 311165160 39389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 21:04:59] CVMFS is ok
[2026-01-07 21:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 21:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 21:04:59] Further information can be found at the LHC@home message board.
[2026-01-07 21:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 21:04:59] Checking for apptainer binary...
[2026-01-07 21:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 21:04:59] Running /usr/bin/apptainer --version
[2026-01-07 21:04:59] apptainer version 1.4.5-2.el9
[2026-01-07 21:04:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 21:05:00] c6-5-37-4.aglt2.org
[2026-01-07 21:05:00] apptainer works
[2026-01-07 21:05:01] Set ATHENA_PROC_NUMBER=8
[2026-01-07 21:05:01] Set ATHENA_CORE_NUMBER=8
[2026-01-07 21:05:01] Starting ATLAS job with PandaID=6962323670
[2026-01-07 21:05:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 03:25:14]  *** The last 200 lines of the pilot log: ***
[2026-01-08 03:25:14] 2026-01-08 08:24:33,870 | INFO     | time since job start (22701s) is within the limit (174528.0s)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,115 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 03:25:14] 2026-01-08 08:24:34,161 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2728.574910714285
[2026-01-08 03:25:14] 2026-01-08 08:24:34,236 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962323670/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,237 | INFO     | extracted standard info from prmon json
[2026-01-08 03:25:14] 2026-01-08 08:24:34,237 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 03:25:14] 2026-01-08 08:24:34,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 03:25:14] 2026-01-08 08:24:34,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 03:25:14] 2026-01-08 08:24:34,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 03:25:14] 2026-01-08 08:24:34,248 | INFO     | fitting pss+swap vs Time
[2026-01-08 03:25:14] 2026-01-08 08:24:34,249 | INFO     | sum of square deviations: 15706181545.502718
[2026-01-08 03:25:14] 2026-01-08 08:24:34,252 | INFO     | sum of deviations: 101226790266.97838
[2026-01-08 03:25:14] 2026-01-08 08:24:34,252 | INFO     | mean x: 1767849356.8162162
[2026-01-08 03:25:14] 2026-01-08 08:24:34,252 | INFO     | mean y: 2466689.4702702705
[2026-01-08 03:25:14] 2026-01-08 08:24:34,252 | INFO     | intersect: -11391373089.319824
[2026-01-08 03:25:14] 2026-01-08 08:24:34,253 | INFO     | chi2: 5.1798629121588835
[2026-01-08 03:25:14] 2026-01-08 08:24:34,253 | INFO     | sum of square deviations: 15078028707.495806
[2026-01-08 03:25:14] 2026-01-08 08:24:34,256 | INFO     | sum of deviations: 171623217437.13144
[2026-01-08 03:25:14] 2026-01-08 08:24:34,256 | INFO     | mean x: 1767849204.320548
[2026-01-08 03:25:14] 2026-01-08 08:24:34,256 | INFO     | mean y: 2483686.7424657536
[2026-01-08 03:25:14] 2026-01-08 08:24:34,256 | INFO     | intersect: -20119773292.270493
[2026-01-08 03:25:14] 2026-01-08 08:24:34,257 | INFO     | chi2: 2.9536941553380043
[2026-01-08 03:25:14] 2026-01-08 08:24:34,257 | INFO     | current chi2=2.9536941553380043 (change=42.97736821558175 %)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,257 | INFO     | sum of square deviations: 14466785769.900055
[2026-01-08 03:25:14] 2026-01-08 08:24:34,260 | INFO     | sum of deviations: 169364652311.9168
[2026-01-08 03:25:14] 2026-01-08 08:24:34,260 | INFO     | mean x: 1767849051.8166666
[2026-01-08 03:25:14] 2026-01-08 08:24:34,260 | INFO     | mean y: 2483122.847222222
[2026-01-08 03:25:14] 2026-01-08 08:24:34,260 | INFO     | intersect: -20693969065.160126
[2026-01-08 03:25:14] 2026-01-08 08:24:34,260 | INFO     | chi2: 2.9523894594009255
[2026-01-08 03:25:14] 2026-01-08 08:24:34,261 | INFO     | current chi2=2.9523894594009255 (change=0.044171666681228336 %)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,261 | INFO     | right removable region: 359
[2026-01-08 03:25:14] 2026-01-08 08:24:34,261 | INFO     | sum of square deviations: 15078002110.76714
[2026-01-08 03:25:14] 2026-01-08 08:24:34,264 | INFO     | sum of deviations: 9736261225.71233
[2026-01-08 03:25:14] 2026-01-08 08:24:34,264 | INFO     | mean x: 1767849509.3150685
[2026-01-08 03:25:14] 2026-01-08 08:24:34,264 | INFO     | mean y: 2488850.906849315
[2026-01-08 03:25:14] 2026-01-08 08:24:34,268 | INFO     | intersect: -1139057920.6079042
[2026-01-08 03:25:14] 2026-01-08 08:24:34,269 | INFO     | chi2: 2.812510690603691
[2026-01-08 03:25:14] 2026-01-08 08:24:34,269 | INFO     | current chi2=2.812510690603691 (change=45.702989860952094 %)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,269 | INFO     | sum of square deviations: 14466800470.530508
[2026-01-08 03:25:14] 2026-01-08 08:24:34,309 | INFO     | sum of deviations: -16070071609.647205
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | mean x: 1767849661.8138888
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | mean y: 2495301.1694444446
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | intersect: 1966265432.5340884
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | chi2: 2.6317655238185855
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | current chi2=2.6317655238185855 (change=6.426470391346658 %)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,310 | INFO     | left removable region: 20
[2026-01-08 03:25:14] 2026-01-08 08:24:34,311 | INFO     | sum of square deviations: 12079839660.85544
[2026-01-08 03:25:14] 2026-01-08 08:24:34,314 | INFO     | sum of deviations: 12170293271.796465
[2026-01-08 03:25:14] 2026-01-08 08:24:34,314 | INFO     | mean x: 1767849631.3126843
[2026-01-08 03:25:14] 2026-01-08 08:24:34,314 | INFO     | mean y: 2524297.256637168
[2026-01-08 03:25:14] 2026-01-08 08:24:34,314 | INFO     | intersect: -1778562958.6638618
[2026-01-08 03:25:14] 2026-01-08 08:24:34,315 | INFO     | chi2: 0.1050665635028497
[2026-01-08 03:25:14] 2026-01-08 08:24:34,315 | INFO     | current memory leak: 1.01 B/s (using 339 data points, chi2=0.11)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | could have reported an average CPU frequency of 2821 MHz (16 samples)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | ..............................
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . Timing measurements:
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . get job = 0 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . initial setup = 7 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . payload setup = 43 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . stage-in = 0 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . payload execution = 22547 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . stage-out = 7 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | . log creation = 1 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,316 | INFO     | ..............................
[2026-01-08 03:25:14] 2026-01-08 08:24:34,847 | INFO     | 
[2026-01-08 03:25:14] 2026-01-08 08:24:34,848 | INFO     | job summary report
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | --------------------------------------------------
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | PanDA job id: 6962323670
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | task id: 47898826
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | errors: (none)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | pilot state: finished 
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | transexitcode: 0
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | exeerrorcode: 0
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | exeerrordiag: 
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | exitcode: 0
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | exitmsg: OK
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | cpuconsumptiontime: 57060 s
[2026-01-08 03:25:14] 2026-01-08 08:24:34,849 | INFO     | nevents: 400
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | neventsw: 0
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | pid: 2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | pgrp: 2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | corecount: 8
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | event service: False
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 28: 2284371, 35: 2284527, 22595: 2319261, 22596: 2319260, 22604: 2328314, 22606: 2328370, 226
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | --------------------------------------------------
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | 
[2026-01-08 03:25:14] 2026-01-08 08:24:34,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 03:25:14] 2026-01-08 08:24:34,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | job 6962323670 has completed (purged errors)
[2026-01-08 03:25:14] 2026-01-08 08:24:34,992 | INFO     | overall cleanup function is called
[2026-01-08 03:25:14] 2026-01-08 08:24:36,006 | INFO     | --- collectZombieJob: --- 10, [2013652]
[2026-01-08 03:25:14] 2026-01-08 08:24:36,006 | INFO     | zombie collector waiting for pid 2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:36,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 03:25:14] 2026-01-08 08:24:36,007 | INFO     | collected zombie processes
[2026-01-08 03:25:14] 2026-01-08 08:24:36,007 | INFO     | will attempt to kill all subprocesses of pid=2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:36,643 | INFO     | process IDs to be killed: [2013652] (in reverse order)
[2026-01-08 03:25:14] 2026-01-08 08:24:36,941 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 03:25:14] 2026-01-08 08:24:36,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 03:25:14] 2026-01-08 08:24:37,071 | INFO     | did not find any defunct processes belonging to 2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:37,262 | INFO     | did not find any defunct processes belonging to 2013652
[2026-01-08 03:25:14] 2026-01-08 08:24:37,263 | INFO     | ready for new job
[2026-01-08 03:25:14] 2026-01-08 08:24:37,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 03:25:14] 2026-01-08 08:24:37,384 | INFO     | ***************************************
[2026-01-08 03:25:14] 2026-01-08 08:24:37,385 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 03:25:14] 2026-01-08 08:24:37,385 | INFO     | ***************************************
[2026-01-08 03:25:14] 2026-01-08 08:24:37,385 | INFO     | 
[2026-01-08 03:25:14] 2026-01-08 08:24:37,388 | INFO     | architecture information:
[2026-01-08 03:25:14] 2026-01-08 08:24:37,429 | INFO     | executing command: cat /etc/os-release
[2026-01-08 03:25:14] 2026-01-08 08:24:37,505 | INFO     | cat /etc/os-release:
[2026-01-08 03:25:14] NAME="CentOS Linux"
[2026-01-08 03:25:14] VERSION="7 (Core)"
[2026-01-08 03:25:14] ID="centos"
[2026-01-08 03:25:14] ID_LIKE="rhel fedora"
[2026-01-08 03:25:14] VERSION_ID="7"
[2026-01-08 03:25:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 03:25:14] ANSI_COLOR="0;31"
[2026-01-08 03:25:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 03:25:14] HOME_URL="https://www.centos.org/"
[2026-01-08 03:25:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 03:25:14] 
[2026-01-08 03:25:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 03:25:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 03:25:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 03:25:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 03:25:14] 
[2026-01-08 03:25:14] 2026-01-08 08:24:37,506 | INFO     | ***************************************
[2026-01-08 03:25:14] 2026-01-08 08:24:38,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 03:25:14] 2026-01-08 08:24:38,081 | INFO     | sufficient remaining disk space (74363961344 B)
[2026-01-08 03:25:14] 2026-01-08 08:24:38,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 03:25:14] 2026-01-08 08:24:38,081 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 03:25:14] 2026-01-08 08:24:38,081 | INFO     | update_server=False
[2026-01-08 03:25:14] 2026-01-08 08:24:38,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 03:25:14] 2026-01-08 08:24:38,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 03:25:14] 2026-01-08 08:24:38,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:25:14] 2026-01-08 08:24:38,148 | INFO     | aborting loop
[2026-01-08 03:25:14] 2026-01-08 08:24:38,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 03:25:14] 2026-01-08 08:24:38,999 | INFO     | all data control threads have been joined
[2026-01-08 03:25:14] 2026-01-08 08:24:39,087 | INFO     | [job] retrieve thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:39,154 | INFO     | [job] job monitor thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:39,310 | INFO     | all payload control threads have been joined
[2026-01-08 03:25:14] 2026-01-08 08:24:39,767 | INFO     | all job control threads have been joined
[2026-01-08 03:25:14] 2026-01-08 08:24:39,798 | INFO     | [payload] failed_post thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:39,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:25:14] 2026-01-08 08:24:40,005 | INFO     | [data] control thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,067 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,171 | INFO     | [job] validate thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,191 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,316 | INFO     | [payload] control thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,471 | INFO     | [payload] validate_post thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,477 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,482 | INFO     | [data] copytool_in thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,639 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,773 | INFO     | [job] control thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:40,871 | INFO     | [job] queue monitor thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:41,003 | INFO     | [data] copytool_out thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:42,091 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 03:25:14] 2026-01-08 08:24:50,915 | INFO     | [monitor] cgroup control has ended
[2026-01-08 03:25:14] 2026-01-08 08:24:50,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759890483008)>', '<ExcThread(monitor, started 139759527630592)>']
[2026-01-08 03:25:14] 2026-01-08 08:24:56,004 | INFO     | all workflow threads have been joined
[2026-01-08 03:25:14] 2026-01-08 08:24:56,004 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 03:25:14] 2026-01-08 08:24:56,005 | INFO     | traces error code: 0
[2026-01-08 03:25:14] 2026-01-08 08:24:56,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 03:25:14] 2026-01-08 08:25:12,067 | INFO     | PID=2003246 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 03:25:14] 2026-01-08 08:25:12,067 | INFO     | .. there are 10 such processes running
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 03:25:14] 2026-01-08 08:25:12,068 | INFO     | [monitor] control thread has ended
[2026-01-08 03:25:14] 2026-01-08 08:25:13,665 [wrapper] ==== pilot stdout END ====
[2026-01-08 03:25:14] 2026-01-08 08:25:13,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 03:25:14] 2026-01-08 08:25:13,770 [wrapper] pilotpid: 2003246
[2026-01-08 03:25:14] 2026-01-08 08:25:13,804 [wrapper] Pilot exit status: 0
[2026-01-08 03:25:14] 2026-01-08 08:25:13,951 [wrapper] pandaids: 6962323670
[2026-01-08 03:25:14] 2026-01-08 08:25:14,339 [wrapper] cleanup supervisor_pilot 2821405 2003247
[2026-01-08 03:25:14] 2026-01-08 08:25:14,356 [wrapper] Test setup, not cleaning
[2026-01-08 03:25:14] 2026-01-08 08:25:14,373 [wrapper] apfmon messages muted
[2026-01-08 03:25:14] 2026-01-08 08:25:14,390 [wrapper] ==== wrapper stdout END ====
[2026-01-08 03:25:14] 2026-01-08 08:25:14,424 [wrapper] ==== wrapper stderr END ====
[2026-01-08 03:25:14]  *** Error codes and diagnostics ***
[2026-01-08 03:25:14]     "exeErrorCode": 0,
[2026-01-08 03:25:14]     "exeErrorDiag": "",
[2026-01-08 03:25:14]     "pilotErrorCode": 0,
[2026-01-08 03:25:14]     "pilotErrorDiag": "",
[2026-01-08 03:25:14]  *** Listing of results directory ***
[2026-01-08 03:25:14] total 451288
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 03:25:14] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas       100 Jan  7 21:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 03:25:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 21:04 run_atlas
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas       105 Jan  7 21:04 job.xml
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas 225351227 Jan  7 21:04 EVNT.47898824._000756.pool.root.1
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 21:04 start_atlas.sh
[2026-01-08 03:25:14] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 21:04 shared
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas    592402 Jan  7 21:04 input.tar.gz
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas         0 Jan  7 21:04 boinc_lockfile
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 21:05 pandaJob.out
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas        57 Jan  7 21:05 setup.sh.local
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas    989843 Jan  7 21:06 agis_schedconf.cvmfs.json
[2026-01-08 03:25:14] drwx------. 5 boincer umatlas      4096 Jan  7 21:06 pilot3
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas 225646988 Jan  8 03:21 HITS.47898826._016295.pool.root.1
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas      6842 Jan  8 03:21 init_data.xml
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas       531 Jan  8 03:21 boinc_task_state.xml
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas      1054 Jan  8 03:23 memory_monitor_summary.json
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas   1516240 Jan  8 03:23 agis_ddmendpoints.agis.ALL.json
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas    568858 Jan  8 03:23 log.47898826._016295.job.log.tgz.1
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas      7846 Jan  8 03:24 heartbeat.json
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas        28 Jan  8 03:25 wrapper_checkpoint.txt
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 03:25 boinc_mmap_file
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas        95 Jan  8 03:25 pilot_heartbeat.json
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas       893 Jan  8 03:25 pilotlog.txt
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas   3034585 Jan  8 03:25 log.47898826._016295.job.log.1
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas       357 Jan  8 03:25 output.list
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas       620 Jan  8 03:25 runtime_log
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas   3624960 Jan  8 03:25 result.tar.gz
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas      9348 Jan  8 03:25 runtime_log.err
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas       662 Jan  8 03:25 q3XLDmoxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmf7dKDmZwb4Ko.diag
[2026-01-08 03:25:14] -rw-r--r--. 1 boincer umatlas     21210 Jan  8 03:25 stderr.txt
[2026-01-08 03:25:14] HITS file was successfully produced:
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas 225646988 Jan  8 03:21 shared/HITS.pool.root.1
[2026-01-08 03:25:14]  *** Contents of shared directory: ***
[2026-01-08 03:25:14] total 444576
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas 225351227 Jan  7 21:04 ATLAS.root_0
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 21:04 start_atlas.sh
[2026-01-08 03:25:14] -rw-r--r--. 2 boincer umatlas    592402 Jan  7 21:04 input.tar.gz
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas 225646988 Jan  8 03:21 HITS.pool.root.1
[2026-01-08 03:25:14] -rw-------. 1 boincer umatlas   3624960 Jan  8 03:25 result.tar.gz
03:25:16 (1996965): run_atlas exited; CPU time 57544.427778
03:25:16 (1996965): called boinc_finish(0)

</stderr_txt>
]]>

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