Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:16:47 (1975727): wrapper (7.7.26015): starting
23:16:47 (1975727): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:16:47] Arguments: --nthreads 8
[2026-01-07 23:16:47] Threads: 8
[2026-01-07 23:16:47] Checking for CVMFS
[2026-01-07 23:16:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:16:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:16:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:16:50] 2.13.3.0 9428 89783 322128 154890 1 19 16197171 18491392 20949 16776704 0 396295051 99.348 642470586 33343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:16:50] CVMFS is ok
[2026-01-07 23:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:16:50] Further information can be found at the LHC@home message board.
[2026-01-07 23:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:16:50] Checking for apptainer binary...
[2026-01-07 23:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:16:50] Running /usr/bin/apptainer --version
[2026-01-07 23:16:50] apptainer version 1.4.5-2.el9
[2026-01-07 23:16:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:16:50] c-8-38.aglt2.org
[2026-01-07 23:16:50] apptainer works
[2026-01-07 23:16:50] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:16:50] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:16:51] Starting ATLAS job with PandaID=6962321678
[2026-01-07 23:16:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:27:41 (2010447): wrapper (7.7.26015): starting
23:27:41 (2010447): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:27:41] Arguments: --nthreads 8
[2026-01-07 23:27:41] Threads: 8
[2026-01-07 23:27:41] This job has been restarted, cleaning up previous attempt
[2026-01-07 23:27:41] Checking for CVMFS
[2026-01-07 23:27:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:27:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:27:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:27:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:27:42] 2.13.3.0 9428 89794 322288 154891 2 192 16215926 18491392 19253 16776704 0 396340855 99.348 642472284 33343 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:27:42] CVMFS is ok
[2026-01-07 23:27:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:27:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:27:42] Further information can be found at the LHC@home message board.
[2026-01-07 23:27:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:27:42] Checking for apptainer binary...
[2026-01-07 23:27:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:27:42] Running /usr/bin/apptainer --version
[2026-01-07 23:27:42] apptainer version 1.4.5-2.el9
[2026-01-07 23:27:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:27:42] c-8-38.aglt2.org
[2026-01-07 23:27:42] apptainer works
[2026-01-07 23:27:42] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:27:42] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:27:42] Starting ATLAS job with PandaID=6962321678
[2026-01-07 23:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:40:47]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:40:47] 2026-01-08 16:40:13,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:40:47] 2026-01-08 16:40:13,748 | INFO     | time since job start (43917s) is within the limit (174528.0s)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,361 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 11:40:47] 2026-01-08 16:40:15,368 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2711250000007
[2026-01-08 11:40:47] 2026-01-08 16:40:15,374 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962321678/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,375 | INFO     | extracted standard info from prmon json
[2026-01-08 11:40:47] 2026-01-08 16:40:15,375 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:40:47] 2026-01-08 16:40:15,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:40:47] 2026-01-08 16:40:15,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:40:47] 2026-01-08 16:40:15,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:40:47] 2026-01-08 16:40:15,389 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:40:47] 2026-01-08 16:40:15,390 | INFO     | sum of square deviations: 115254844589.70258
[2026-01-08 11:40:47] 2026-01-08 16:40:15,403 | INFO     | sum of deviations: 105131865498.139
[2026-01-08 11:40:47] 2026-01-08 16:40:15,404 | INFO     | mean x: 1767868480.3602226
[2026-01-08 11:40:47] 2026-01-08 16:40:15,404 | INFO     | mean y: 2518625.1307371347
[2026-01-08 11:40:47] 2026-01-08 16:40:15,404 | INFO     | intersect: -1610075725.7381885
[2026-01-08 11:40:47] 2026-01-08 16:40:15,405 | INFO     | chi2: 2.828473137044986
[2026-01-08 11:40:47] 2026-01-08 16:40:15,406 | INFO     | sum of square deviations: 112867092766.54927
[2026-01-08 11:40:47] 2026-01-08 16:40:15,418 | INFO     | sum of deviations: 150889973855.35303
[2026-01-08 11:40:47] 2026-01-08 16:40:15,418 | INFO     | mean x: 1767868327.862745
[2026-01-08 11:40:47] 2026-01-08 16:40:15,418 | INFO     | mean y: 2521529.8403361347
[2026-01-08 11:40:47] 2026-01-08 16:40:15,418 | INFO     | intersect: -2360909645.999915
[2026-01-08 11:40:47] 2026-01-08 16:40:15,419 | INFO     | chi2: 2.0451188137289322
[2026-01-08 11:40:47] 2026-01-08 16:40:15,420 | INFO     | current chi2=2.0451188137289322 (change=27.69530716259352 %)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,421 | INFO     | sum of square deviations: 110512507314.11566
[2026-01-08 11:40:47] 2026-01-08 16:40:15,433 | INFO     | sum of deviations: 148845708580.19318
[2026-01-08 11:40:47] 2026-01-08 16:40:15,433 | INFO     | mean x: 1767868175.3638928
[2026-01-08 11:40:47] 2026-01-08 16:40:15,434 | INFO     | mean y: 2521397.437235543
[2026-01-08 11:40:47] 2026-01-08 16:40:15,434 | INFO     | intersect: -2378562858.3970475
[2026-01-08 11:40:47] 2026-01-08 16:40:15,435 | INFO     | chi2: 2.04526614201158
[2026-01-08 11:40:47] 2026-01-08 16:40:15,435 | INFO     | current chi2=2.04526614201158 (change=-0.00720389845611088 %)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,435 | INFO     | right removable region: 708
[2026-01-08 11:40:47] 2026-01-08 16:40:15,436 | INFO     | sum of square deviations: 112866934776.54913
[2026-01-08 11:40:47] 2026-01-08 16:40:15,448 | INFO     | sum of deviations: -41496071645.70594
[2026-01-08 11:40:47] 2026-01-08 16:40:15,448 | INFO     | mean x: 1767868632.862745
[2026-01-08 11:40:47] 2026-01-08 16:40:15,449 | INFO     | mean y: 2527968.962184874
[2026-01-08 11:40:47] 2026-01-08 16:40:15,449 | INFO     | intersect: 652493378.1823788
[2026-01-08 11:40:47] 2026-01-08 16:40:15,450 | INFO     | chi2: 0.9485752232308144
[2026-01-08 11:40:47] 2026-01-08 16:40:15,450 | INFO     | current chi2=0.9485752232308144 (change=66.46334692710472 %)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,451 | INFO     | sum of square deviations: 110512234888.3864
[2026-01-08 11:40:47] 2026-01-08 16:40:15,463 | INFO     | sum of deviations: -64249012766.40194
[2026-01-08 11:40:47] 2026-01-08 16:40:15,463 | INFO     | mean x: 1767868785.3653033
[2026-01-08 11:40:47] 2026-01-08 16:40:15,463 | INFO     | mean y: 2529441.0324400566
[2026-01-08 11:40:47] 2026-01-08 16:40:15,464 | INFO     | intersect: 1030323551.5666687
[2026-01-08 11:40:47] 2026-01-08 16:40:15,465 | INFO     | chi2: 0.9078438432888872
[2026-01-08 11:40:47] 2026-01-08 16:40:15,465 | INFO     | current chi2=0.9078438432888872 (change=4.293953599504481 %)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,465 | INFO     | left removable region: 20
[2026-01-08 11:40:47] 2026-01-08 16:40:15,466 | INFO     | sum of square deviations: 100980205426.7441
[2026-01-08 11:40:47] 2026-01-08 16:40:15,477 | INFO     | sum of deviations: 2445191558.174431
[2026-01-08 11:40:47] 2026-01-08 16:40:15,478 | INFO     | mean x: 1767868754.872093
[2026-01-08 11:40:47] 2026-01-08 16:40:15,478 | INFO     | mean y: 2530932.1497093025
[2026-01-08 11:40:47] 2026-01-08 16:40:15,478 | INFO     | intersect: -40277237.40298125
[2026-01-08 11:40:47] 2026-01-08 16:40:15,479 | INFO     | chi2: 0.10022644497759567
[2026-01-08 11:40:47] 2026-01-08 16:40:15,479 | INFO     | current memory leak: 0.02 B/s (using 688 data points, chi2=0.10)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,480 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,480 | INFO     | ..............................
[2026-01-08 11:40:47] 2026-01-08 16:40:15,480 | INFO     | . Timing measurements:
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . get job = 0 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . initial setup = 1 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . payload setup = 20 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . stage-in = 0 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . payload execution = 43848 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . stage-out = 2 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | . log creation = 0 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,481 | INFO     | ..............................
[2026-01-08 11:40:47] 2026-01-08 16:40:15,582 | INFO     | 
[2026-01-08 11:40:47] 2026-01-08 16:40:15,583 | INFO     | job summary report
[2026-01-08 11:40:47] 2026-01-08 16:40:15,583 | INFO     | --------------------------------------------------
[2026-01-08 11:40:47] 2026-01-08 16:40:15,583 | INFO     | PanDA job id: 6962321678
[2026-01-08 11:40:47] 2026-01-08 16:40:15,583 | INFO     | task id: 47898826
[2026-01-08 11:40:47] 2026-01-08 16:40:15,583 | INFO     | errors: (none)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | pilot state: finished 
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | transexitcode: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | exeerrorcode: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | exeerrordiag: 
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | exitcode: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | exitmsg: OK
[2026-01-08 11:40:47] 2026-01-08 16:40:15,584 | INFO     | cpuconsumptiontime: 69304 s
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | nevents: 400
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | neventsw: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | pid: 2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | pgrp: 2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | corecount: 8
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | event service: False
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | sizes: {0: 2283798, 1: 2283997, 2: 2284025, 13: 2284025, 17: 2284343, 24: 2284371, 43872: 2329007, 43875: 2338061, 43882: 2338199}
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | --------------------------------------------------
[2026-01-08 11:40:47] 2026-01-08 16:40:15,585 | INFO     | 
[2026-01-08 11:40:47] 2026-01-08 16:40:15,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 11:40:47] 2026-01-08 16:40:15,608 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,610 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:40:47] 2026-01-08 16:40:15,611 | INFO     | job 6962321678 has completed (purged errors)
[2026-01-08 11:40:47] 2026-01-08 16:40:15,611 | INFO     | overall cleanup function is called
[2026-01-08 11:40:47] 2026-01-08 16:40:16,621 | INFO     | --- collectZombieJob: --- 10, [2033519]
[2026-01-08 11:40:47] 2026-01-08 16:40:16,623 | INFO     | zombie collector waiting for pid 2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:16,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:40:47] 2026-01-08 16:40:16,623 | INFO     | collected zombie processes
[2026-01-08 11:40:47] 2026-01-08 16:40:16,623 | INFO     | will attempt to kill all subprocesses of pid=2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:17,010 | INFO     | process IDs to be killed: [2033519] (in reverse order)
[2026-01-08 11:40:47] 2026-01-08 16:40:17,120 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:40:47] 2026-01-08 16:40:17,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:40:47] 2026-01-08 16:40:17,135 | INFO     | did not find any defunct processes belonging to 2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:17,150 | INFO     | did not find any defunct processes belonging to 2033519
[2026-01-08 11:40:47] 2026-01-08 16:40:17,150 | INFO     | ready for new job
[2026-01-08 11:40:47] 2026-01-08 16:40:17,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:40:47] 2026-01-08 16:40:17,154 | INFO     | ***************************************
[2026-01-08 11:40:47] 2026-01-08 16:40:17,154 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:40:47] 2026-01-08 16:40:17,154 | INFO     | ***************************************
[2026-01-08 11:40:47] 2026-01-08 16:40:17,155 | INFO     | 
[2026-01-08 11:40:47] 2026-01-08 16:40:17,157 | INFO     | architecture information:
[2026-01-08 11:40:47] 2026-01-08 16:40:17,157 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:40:47] 2026-01-08 16:40:17,179 | INFO     | cat /etc/os-release:
[2026-01-08 11:40:47] NAME="CentOS Linux"
[2026-01-08 11:40:47] VERSION="7 (Core)"
[2026-01-08 11:40:47] ID="centos"
[2026-01-08 11:40:47] ID_LIKE="rhel fedora"
[2026-01-08 11:40:47] VERSION_ID="7"
[2026-01-08 11:40:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:40:47] ANSI_COLOR="0;31"
[2026-01-08 11:40:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:40:47] HOME_URL="https://www.centos.org/"
[2026-01-08 11:40:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:40:47] 
[2026-01-08 11:40:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:40:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:40:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:40:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:40:47] 
[2026-01-08 11:40:47] 2026-01-08 16:40:17,179 | INFO     | ***************************************
[2026-01-08 11:40:47] 2026-01-08 16:40:17,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 11:40:47] 2026-01-08 16:40:17,703 | INFO     | sufficient remaining disk space (95862915072 B)
[2026-01-08 11:40:47] 2026-01-08 16:40:17,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:40:47] 2026-01-08 16:40:17,703 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:40:47] 2026-01-08 16:40:17,703 | INFO     | update_server=False
[2026-01-08 11:40:47] 2026-01-08 16:40:17,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:40:47] 2026-01-08 16:40:17,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:40:47] 2026-01-08 16:40:17,704 | INFO     | aborting loop
[2026-01-08 11:40:47] 2026-01-08 16:40:17,838 | INFO     | all job control threads have been joined
[2026-01-08 11:40:47] 2026-01-08 16:40:18,097 | INFO     | all payload control threads have been joined
[2026-01-08 11:40:47] 2026-01-08 16:40:18,317 | INFO     | all data control threads have been joined
[2026-01-08 11:40:47] 2026-01-08 16:40:18,710 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:18,711 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:18,757 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:18,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:40:47] 2026-01-08 16:40:18,843 | INFO     | [job] control thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:18,859 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:18,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:40:47] 2026-01-08 16:40:19,102 | INFO     | [payload] control thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,322 | INFO     | [data] control thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,436 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,446 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,566 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,716 | INFO     | [job] validate thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:19,933 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:20,101 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:20,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:40:47] 2026-01-08 16:40:20,831 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:21,599 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:22,929 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:40:47] 2026-01-08 16:40:34,233 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:40:47] 2026-01-08 16:40:35,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826881873728)>', '<ExcThread(monitor, started 139826401629952)>']
[2026-01-08 11:40:47] 2026-01-08 16:40:40,504 | INFO     | all workflow threads have been joined
[2026-01-08 11:40:47] 2026-01-08 16:40:40,504 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:40:47] 2026-01-08 16:40:40,504 | INFO     | traces error code: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:40,505 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:40:47] 2026-01-08 16:40:47,317 | INFO     | PID=2018842 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 11:40:47] 2026-01-08 16:40:47,318 | INFO     | .. there are 35 such processes running
[2026-01-08 11:40:47] 2026-01-08 16:40:47,319 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:40:47] 2026-01-08 16:40:47,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:40:47] 2026-01-08 16:40:47,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:40:47] 2026-01-08 16:40:47,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:40:47] 2026-01-08 16:40:47,319 | INFO     | [monitor] control thread has ended
[2026-01-08 11:40:47] 2026-01-08 16:40:47,546 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:40:47] 2026-01-08 16:40:47,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:40:47] 2026-01-08 16:40:47,553 [wrapper] pilotpid: 2018842
[2026-01-08 11:40:47] 2026-01-08 16:40:47,557 [wrapper] Pilot exit status: 0
[2026-01-08 11:40:47] 2026-01-08 16:40:47,572 [wrapper] pandaids: 6962321678 6962321678
[2026-01-08 11:40:47] 2026-01-08 16:40:47,658 [wrapper] cleanup supervisor_pilot 1548091 2018843
[2026-01-08 11:40:47] 2026-01-08 16:40:47,662 [wrapper] Test setup, not cleaning
[2026-01-08 11:40:47] 2026-01-08 16:40:47,666 [wrapper] apfmon messages muted
[2026-01-08 11:40:47] 2026-01-08 16:40:47,670 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:40:47] 2026-01-08 16:40:47,673 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:40:47]  *** Error codes and diagnostics ***
[2026-01-08 11:40:47]     "exeErrorCode": 0,
[2026-01-08 11:40:47]     "exeErrorDiag": "",
[2026-01-08 11:40:47]     "pilotErrorCode": 0,
[2026-01-08 11:40:47]     "pilotErrorDiag": "",
[2026-01-08 11:40:47]  *** Listing of results directory ***
[2026-01-08 11:40:47] total 670792
[2026-01-08 11:40:47] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 11:40:47] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas       100 Jan  7 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:40:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 23:16 run_atlas
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas       105 Jan  7 23:16 job.xml
[2026-01-08 11:40:47] -rw-r--r--. 3 boincer umatlas 225475857 Jan  7 23:16 EVNT.47898824._000699.pool.root.1
[2026-01-08 11:40:47] -rw-r--r--. 3 boincer umatlas 225475857 Jan  7 23:16 ATLAS.root_0
[2026-01-08 11:40:47] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 23:16 shared
[2026-01-08 11:40:47] -rw-r--r--. 2 boincer umatlas    592403 Jan  7 23:16 input.tar.gz
[2026-01-08 11:40:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:16 start_atlas.sh
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas         0 Jan  7 23:16 boinc_lockfile
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 23:27 pandaJob.out
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas        57 Jan  7 23:27 setup.sh.local
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas    989835 Jan  7 23:28 agis_schedconf.cvmfs.json
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas 219460216 Jan  8 11:39 HITS.47898826._014879.pool.root.1
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas       531 Jan  8 11:39 boinc_task_state.xml
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas      1056 Jan  8 11:40 memory_monitor_summary.json
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas   1516240 Jan  8 11:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas    839544 Jan  8 11:40 log.47898826._014879.job.log.tgz.1
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas      7841 Jan  8 11:40 heartbeat.json
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas      6660 Jan  8 11:40 init_data.xml
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 11:40 boinc_mmap_file
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas        28 Jan  8 11:40 wrapper_checkpoint.txt
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas       823 Jan  8 11:40 pilotlog.txt
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas        96 Jan  8 11:40 pilot_heartbeat.json
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas   5440396 Jan  8 11:40 log.47898826._014879.job.log.1
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas       357 Jan  8 11:40 output.list
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas       620 Jan  8 11:40 runtime_log
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas   6297600 Jan  8 11:40 result.tar.gz
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas       785 Jan  8 11:40 TZJODmQxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm33dKDmkyPJqn.diag
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas      9418 Jan  8 11:40 runtime_log.err
[2026-01-08 11:40:47] -rw-r--r--. 1 boincer umatlas     23374 Jan  8 11:40 stderr.txt
[2026-01-08 11:40:47] HITS file was successfully produced:
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas 219460216 Jan  8 11:39 shared/HITS.pool.root.1
[2026-01-08 11:40:47]  *** Contents of shared directory: ***
[2026-01-08 11:40:47] total 441268
[2026-01-08 11:40:47] -rw-r--r--. 3 boincer umatlas 225475857 Jan  7 23:16 ATLAS.root_0
[2026-01-08 11:40:47] -rw-r--r--. 2 boincer umatlas    592403 Jan  7 23:16 input.tar.gz
[2026-01-08 11:40:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:16 start_atlas.sh
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas 219460216 Jan  8 11:39 HITS.pool.root.1
[2026-01-08 11:40:47] -rw-------. 1 boincer umatlas   6297600 Jan  8 11:40 result.tar.gz
11:41:08 (2010447): run_atlas exited; CPU time 71177.923333
11:41:08 (2010447): called boinc_finish(0)

</stderr_txt>
]]>

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