Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:30 (1349370): wrapper (7.7.26015): starting
00:03:30 (1349370): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 00:03:30] Arguments: --nthreads 8
[2026-01-08 00:03:30] Threads: 8
[2026-01-08 00:03:30] Checking for CVMFS
[2026-01-08 00:03:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:03:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:03:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:03:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:03:32] 2.13.3.0 8207 19192 176728 154891 1 96 37887202 40960000 9034 16776704 0 9937175 99.681 9256369 33685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 00:03:32] CVMFS is ok
[2026-01-08 00:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:03:32] Further information can be found at the LHC@home message board.
[2026-01-08 00:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:03:32] Checking for apptainer binary...
[2026-01-08 00:03:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:03:32] Running /usr/bin/apptainer --version
[2026-01-08 00:03:32] apptainer version 1.4.5-2.el9
[2026-01-08 00:03:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:03:32] c-211-11.aglt2.org
[2026-01-08 00:03:32] apptainer works
[2026-01-08 00:03:33] Set ATHENA_PROC_NUMBER=8
[2026-01-08 00:03:33] Set ATHENA_CORE_NUMBER=8
[2026-01-08 00:03:33] Starting ATLAS job with PandaID=6962321627
[2026-01-08 00:03:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:07:08]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:07:08] 2026-01-08 19:06:09,321 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2620.533208333334
[2026-01-08 14:07:08] 2026-01-08 19:06:09,371 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962321627/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:07:08] 2026-01-08 19:06:09,392 | INFO     | extracted standard info from prmon json
[2026-01-08 14:07:08] 2026-01-08 19:06:09,392 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:07:08] 2026-01-08 19:06:09,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:07:08] 2026-01-08 19:06:09,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:07:08] 2026-01-08 19:06:09,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:07:08] 2026-01-08 19:06:09,496 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:07:08] 2026-01-08 19:06:09,497 | INFO     | sum of square deviations: 174744221668.22638
[2026-01-08 14:07:08] 2026-01-08 19:06:09,569 | INFO     | monitor loop #2770: job 0:6962321627 is in state 'finished'
[2026-01-08 14:07:08] 2026-01-08 19:06:09,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:07:08] 2026-01-08 19:06:09,593 | INFO     | sum of deviations: 222438354979.42902
[2026-01-08 14:07:08] 2026-01-08 19:06:09,594 | INFO     | mean x: 1767873923.5181599
[2026-01-08 14:07:08] 2026-01-08 19:06:09,594 | INFO     | mean y: 2518098.5714285714
[2026-01-08 14:07:08] 2026-01-08 19:06:09,607 | INFO     | intersect: -2247873723.2825093
[2026-01-08 14:07:08] 2026-01-08 19:06:09,608 | INFO     | chi2: 4.131345028965666
[2026-01-08 14:07:08] 2026-01-08 19:06:09,610 | INFO     | sum of square deviations: 171590113971.60547
[2026-01-08 14:07:08] 2026-01-08 19:06:09,710 | INFO     | sum of deviations: 376132918446.9063
[2026-01-08 14:07:08] 2026-01-08 19:06:09,710 | INFO     | mean x: 1767873771.0219245
[2026-01-08 14:07:08] 2026-01-08 19:06:09,710 | INFO     | mean y: 2525510.616321559
[2026-01-08 14:07:08] 2026-01-08 19:06:09,710 | INFO     | intersect: -3872729919.601822
[2026-01-08 14:07:08] 2026-01-08 19:06:09,728 | INFO     | chi2: 2.053033852277953
[2026-01-08 14:07:08] 2026-01-08 19:06:09,728 | INFO     | current chi2=2.053033852277953 (change=50.30592124638024 %)
[2026-01-08 14:07:08] 2026-01-08 19:06:09,729 | INFO     | sum of square deviations: 168474142835.51007
[2026-01-08 14:07:08] 2026-01-08 19:06:09,825 | INFO     | sum of deviations: 372888028269.3479
[2026-01-08 14:07:08] 2026-01-08 19:06:09,826 | INFO     | mean x: 1767873618.52451
[2026-01-08 14:07:08] 2026-01-08 19:06:09,826 | INFO     | mean y: 2525351.807598039
[2026-01-08 14:07:08] 2026-01-08 19:06:09,826 | INFO     | intersect: -3910353483.757281
[2026-01-08 14:07:08] 2026-01-08 19:06:09,849 | INFO     | chi2: 2.052921902489387
[2026-01-08 14:07:08] 2026-01-08 19:06:09,850 | INFO     | current chi2=2.052921902489387 (change=0.005452895403637692 %)
[2026-01-08 14:07:08] 2026-01-08 19:06:09,850 | INFO     | right removable region: 815
[2026-01-08 14:07:08] 2026-01-08 19:06:09,851 | INFO     | sum of square deviations: 171589751630.56042
[2026-01-08 14:07:08] 2026-01-08 19:06:09,979 | INFO     | sum of deviations: 42656449377.52641
[2026-01-08 14:07:08] 2026-01-08 19:06:09,979 | INFO     | mean x: 1767874076.0231426
[2026-01-08 14:07:08] 2026-01-08 19:06:09,980 | INFO     | mean y: 2526775.6565164435
[2026-01-08 14:07:08] 2026-01-08 19:06:09,980 | INFO     | intersect: -436958859.7798344
[2026-01-08 14:07:08] 2026-01-08 19:06:09,981 | INFO     | chi2: 2.142156953846875
[2026-01-08 14:07:08] 2026-01-08 19:06:09,981 | INFO     | current chi2=2.142156953846875 (change=48.148679453596955 %)
[2026-01-08 14:07:08] 2026-01-08 19:06:09,982 | INFO     | sum of square deviations: 168473418395.29398
[2026-01-08 14:07:08] 2026-01-08 19:06:10,115 | INFO     | sum of deviations: 26768174721.646957
[2026-01-08 14:07:08] 2026-01-08 19:06:10,116 | INFO     | mean x: 1767874228.5294118
[2026-01-08 14:07:08] 2026-01-08 19:06:10,116 | INFO     | mean y: 2527552.785539216
[2026-01-08 14:07:08] 2026-01-08 19:06:10,116 | INFO     | intersect: -278364036.4391619
[2026-01-08 14:07:08] 2026-01-08 19:06:10,117 | INFO     | chi2: 2.113145151022639
[2026-01-08 14:07:08] 2026-01-08 19:06:10,117 | INFO     | current chi2=2.113145151022639 (change=1.3543266646328993 %)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,118 | INFO     | left removable region: 20
[2026-01-08 14:07:08] 2026-01-08 19:06:10,119 | INFO     | sum of square deviations: 155797647292.5458
[2026-01-08 14:07:08] 2026-01-08 19:06:10,246 | INFO     | sum of deviations: 167780757449.6543
[2026-01-08 14:07:08] 2026-01-08 19:06:10,246 | INFO     | mean x: 1767874198.0427673
[2026-01-08 14:07:08] 2026-01-08 19:06:10,246 | INFO     | mean y: 2535484.1572327046
[2026-01-08 14:07:08] 2026-01-08 19:06:10,246 | INFO     | intersect: -1901314010.2215397
[2026-01-08 14:07:08] 2026-01-08 19:06:10,266 | INFO     | chi2: 0.015670014222115038
[2026-01-08 14:07:08] 2026-01-08 19:06:10,266 | INFO     | current memory leak: 1.08 B/s (using 795 data points, chi2=0.02)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,267 | INFO     | could have reported an average CPU frequency of 2562 MHz (31 samples)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | ..............................
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . Timing measurements:
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . get job = 0 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . initial setup = 6 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . payload setup = 22 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . stage-in = 0 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,268 | INFO     | . payload execution = 50382 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,269 | INFO     | . stage-out = 4 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,269 | INFO     | . log creation = 1 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,269 | INFO     | ..............................
[2026-01-08 14:07:08] 2026-01-08 19:06:10,645 | INFO     | 
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | job summary report
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | --------------------------------------------------
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | PanDA job id: 6962321627
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | task id: 47898826
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | errors: (none)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,646 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | pilot state: finished 
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | transexitcode: 0
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | exeerrorcode: 0
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | exeerrordiag: 
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | exitcode: 0
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | exitmsg: OK
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | cpuconsumptiontime: 78775 s
[2026-01-08 14:07:08] 2026-01-08 19:06:10,647 | INFO     | nevents: 400
[2026-01-08 14:07:08] 2026-01-08 19:06:10,648 | INFO     | neventsw: 0
[2026-01-08 14:07:08] 2026-01-08 19:06:10,648 | INFO     | pid: 1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:10,648 | INFO     | pgrp: 1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:10,652 | INFO     | corecount: 8
[2026-01-08 14:07:08] 2026-01-08 19:06:10,652 | INFO     | event service: False
[2026-01-08 14:07:08] 2026-01-08 19:06:10,652 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 28: 2284371, 34: 2284527, 50408: 2331677, 50413: 2340675, 50414: 2340731, 50455: 2340925}
[2026-01-08 14:07:08] 2026-01-08 19:06:10,653 | INFO     | --------------------------------------------------
[2026-01-08 14:07:08] 2026-01-08 19:06:10,653 | INFO     | 
[2026-01-08 14:07:08] 2026-01-08 19:06:10,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 14:07:08] 2026-01-08 19:06:10,748 | INFO     | time since job start (50508s) is within the limit (174528.0s)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,757 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:07:08] 2026-01-08 19:06:10,760 | INFO     | job 6962321627 has completed (purged errors)
[2026-01-08 14:07:08] 2026-01-08 19:06:10,760 | INFO     | overall cleanup function is called
[2026-01-08 14:07:08] 2026-01-08 19:06:11,778 | INFO     | --- collectZombieJob: --- 10, [1360477]
[2026-01-08 14:07:08] 2026-01-08 19:06:11,778 | INFO     | zombie collector waiting for pid 1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:11,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:07:08] 2026-01-08 19:06:11,779 | INFO     | collected zombie processes
[2026-01-08 14:07:08] 2026-01-08 19:06:11,779 | INFO     | will attempt to kill all subprocesses of pid=1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:12,432 | INFO     | process IDs to be killed: [1360477] (in reverse order)
[2026-01-08 14:07:08] 2026-01-08 19:06:12,983 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:07:08] 2026-01-08 19:06:12,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:07:08] 2026-01-08 19:06:13,008 | INFO     | did not find any defunct processes belonging to 1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:13,037 | INFO     | did not find any defunct processes belonging to 1360477
[2026-01-08 14:07:08] 2026-01-08 19:06:13,037 | INFO     | ready for new job
[2026-01-08 14:07:08] 2026-01-08 19:06:13,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:07:08] 2026-01-08 19:06:13,045 | INFO     | ***************************************
[2026-01-08 14:07:08] 2026-01-08 19:06:13,050 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:07:08] 2026-01-08 19:06:13,050 | INFO     | ***************************************
[2026-01-08 14:07:08] 2026-01-08 19:06:13,050 | INFO     | 
[2026-01-08 14:07:08] 2026-01-08 19:06:13,053 | INFO     | architecture information:
[2026-01-08 14:07:08] 2026-01-08 19:06:13,057 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:07:08] 2026-01-08 19:06:13,132 | INFO     | cat /etc/os-release:
[2026-01-08 14:07:08] NAME="CentOS Linux"
[2026-01-08 14:07:08] VERSION="7 (Core)"
[2026-01-08 14:07:08] ID="centos"
[2026-01-08 14:07:08] ID_LIKE="rhel fedora"
[2026-01-08 14:07:08] VERSION_ID="7"
[2026-01-08 14:07:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:07:08] ANSI_COLOR="0;31"
[2026-01-08 14:07:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:07:08] HOME_URL="https://www.centos.org/"
[2026-01-08 14:07:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:07:08] 
[2026-01-08 14:07:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:07:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:07:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:07:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:07:08] 
[2026-01-08 14:07:08] 2026-01-08 19:06:13,133 | INFO     | ***************************************
[2026-01-08 14:07:08] 2026-01-08 19:06:13,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 14:07:08] 2026-01-08 19:06:13,703 | INFO     | sufficient remaining disk space (63685263360 B)
[2026-01-08 14:07:08] 2026-01-08 19:06:13,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:07:08] 2026-01-08 19:06:13,704 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:07:08] 2026-01-08 19:06:13,704 | INFO     | update_server=False
[2026-01-08 14:07:08] 2026-01-08 19:06:13,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:07:08] 2026-01-08 19:06:13,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:07:08] 2026-01-08 19:06:13,705 | INFO     | aborting loop
[2026-01-08 14:07:08] 2026-01-08 19:06:14,055 | INFO     | all data control threads have been joined
[2026-01-08 14:07:08] 2026-01-08 19:06:14,400 | INFO     | all payload control threads have been joined
[2026-01-08 14:07:08] 2026-01-08 19:06:14,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:07:08] 2026-01-08 19:06:14,710 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:14,714 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:14,945 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,061 | INFO     | [data] control thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,155 | INFO     | all job control threads have been joined
[2026-01-08 14:07:08] 2026-01-08 19:06:15,159 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,255 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,285 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,406 | INFO     | [payload] control thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:07:08] 2026-01-08 19:06:15,979 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,990 | INFO     | [job] validate thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:15,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:16,041 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:16,162 | INFO     | [job] control thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:16,653 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:16,717 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:17,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:07:08] 2026-01-08 19:06:21,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:07:08] 2026-01-08 19:06:45,478 | INFO     | PID=1353230 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 14:07:08] 2026-01-08 19:06:45,479 | INFO     | .. there are 8 such processes running
[2026-01-08 14:07:08] 2026-01-08 19:06:45,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:07:08] 2026-01-08 19:06:45,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:07:08] 2026-01-08 19:06:45,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:07:08] 2026-01-08 19:07:00,704 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:07:08] 2026-01-08 19:07:00,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982265603904)>', '<ExcThread(monitor, started 139981892867840)>']
[2026-01-08 14:07:08] 2026-01-08 19:07:01,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:07:08] 2026-01-08 19:07:01,641 | INFO     | [monitor] control thread has ended
[2026-01-08 14:07:08] 2026-01-08 19:07:05,808 | INFO     | all workflow threads have been joined
[2026-01-08 14:07:08] 2026-01-08 19:07:05,817 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:07:08] 2026-01-08 19:07:05,818 | INFO     | traces error code: 0
[2026-01-08 14:07:08] 2026-01-08 19:07:05,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:07:08] 2026-01-08 19:07:06,343 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:07:08] 2026-01-08 19:07:06,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:07:08] 2026-01-08 19:07:06,393 [wrapper] pilotpid: 1353230
[2026-01-08 14:07:08] 2026-01-08 19:07:06,418 [wrapper] Pilot exit status: 0
[2026-01-08 14:07:08] 2026-01-08 19:07:06,611 [wrapper] pandaids: 6962321627
[2026-01-08 14:07:08] 2026-01-08 19:07:07,112 [wrapper] cleanup supervisor_pilot 2615522 1353231
[2026-01-08 14:07:08] 2026-01-08 19:07:07,141 [wrapper] Test setup, not cleaning
[2026-01-08 14:07:08] 2026-01-08 19:07:07,169 [wrapper] apfmon messages muted
[2026-01-08 14:07:08] 2026-01-08 19:07:07,203 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:07:08] 2026-01-08 19:07:07,228 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:07:08]  *** Error codes and diagnostics ***
[2026-01-08 14:07:08]     "exeErrorCode": 0,
[2026-01-08 14:07:08]     "exeErrorDiag": "",
[2026-01-08 14:07:08]     "pilotErrorCode": 0,
[2026-01-08 14:07:08]     "pilotErrorDiag": "",
[2026-01-08 14:07:08]  *** Listing of results directory ***
[2026-01-08 14:07:08] total 447612
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 14:07:08] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:07:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:03 run_atlas
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:03 job.xml
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas 225008794 Jan  8 00:03 EVNT.47898824._000692.pool.root.1
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 14:07:08] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:03 shared
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 00:03 input.tar.gz
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:03 boinc_lockfile
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 00:03 pandaJob.out
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas        57 Jan  8 00:03 setup.sh.local
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas    989835 Jan  8 00:04 agis_schedconf.cvmfs.json
[2026-01-08 14:07:08] drwx------. 5 boincer umatlas      4096 Jan  8 00:04 pilot3
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas 215802644 Jan  8 14:01 HITS.47898826._014828.pool.root.1
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas       531 Jan  8 14:01 boinc_task_state.xml
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas      6611 Jan  8 14:03 init_data.xml
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas      1040 Jan  8 14:05 memory_monitor_summary.json
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas   1516240 Jan  8 14:05 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas    886747 Jan  8 14:05 log.47898826._014828.job.log.tgz.1
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas      7826 Jan  8 14:06 heartbeat.json
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 14:06 boinc_mmap_file
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas        28 Jan  8 14:06 wrapper_checkpoint.txt
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas        95 Jan  8 14:06 pilot_heartbeat.json
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas      4823 Jan  8 14:07 pilotlog.txt
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas   5928789 Jan  8 14:07 log.47898826._014828.job.log.1
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas       357 Jan  8 14:07 output.list
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas       620 Jan  8 14:07 runtime_log
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas   6830080 Jan  8 14:07 result.tar.gz
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 14:07 runtime_log.err
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas       658 Jan  8 14:07 GAwNDmQxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmm3dKDmvEYdrn.diag
[2026-01-08 14:07:08] -rw-r--r--. 1 boincer umatlas     20953 Jan  8 14:07 stderr.txt
[2026-01-08 14:07:08] HITS file was successfully produced:
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas 215802644 Jan  8 14:01 shared/HITS.pool.root.1
[2026-01-08 14:07:08]  *** Contents of shared directory: ***
[2026-01-08 14:07:08] total 437756
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas 225008794 Jan  8 00:03 ATLAS.root_0
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 14:07:08] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 00:03 input.tar.gz
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas 215802644 Jan  8 14:01 HITS.pool.root.1
[2026-01-08 14:07:08] -rw-------. 1 boincer umatlas   6830080 Jan  8 14:07 result.tar.gz
14:07:10 (1349370): run_atlas exited; CPU time 80400.397431
14:07:10 (1349370): called boinc_finish(0)

</stderr_txt>
]]>

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