Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:54:51 (155156): wrapper (7.7.26015): starting
16:54:51 (155156): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 16:54:51] Arguments: --nthreads 12
[2026-01-07 16:54:51] Threads: 12
[2026-01-07 16:54:51] Checking for CVMFS
[2026-01-07 16:54:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 16:54:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 16:54:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 16:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 16:54:52] 2.11.5.0 1525032 54423 339252 154885 0 383 41624236 45568001 16409 130560 0 389997892 99.776 271425921 21223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-07 16:54:52] CVMFS is ok
[2026-01-07 16:54:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 16:54:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 16:54:52] Further information can be found at the LHC@home message board.
[2026-01-07 16:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 16:54:52] Checking for apptainer binary...
[2026-01-07 16:54:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 16:54:52] Running /usr/bin/apptainer --version
[2026-01-07 16:54:52] apptainer version 1.4.1-1.el9
[2026-01-07 16:54:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 16:54:52] wns0053.triumf.lcg
[2026-01-07 16:54:52] apptainer works
[2026-01-07 16:54:52] Set ATHENA_PROC_NUMBER=12
[2026-01-07 16:54:52] Set ATHENA_CORE_NUMBER=12
[2026-01-07 16:54:52] Starting ATLAS job with PandaID=6962324029
[2026-01-07 16:54:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 16:59:16]  *** The last 200 lines of the pilot log: ***
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | WARNING  | wrong length of table data, x=[1767833772.0], y=[20123.0] (must be same and length>=4)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . Timing measurements:
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . get job = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . initial setup = 3 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload setup = 18 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-in = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload execution = 29 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-out = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . log creation = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962324029/pilotlog.txt
[2026-01-07 16:59:16] 2026-01-08 00:58:43,793 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-07 16:59:16] - Log from pilotlog.txt -
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962324029/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | extracted standard info from prmon json
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | WARNING  | wrong length of table data, x=[1767833772.0], y=[20123.0] (must be same and length>=4)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . Timing measurements:
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . get job = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . initial setup = 3 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload setup = 18 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-in = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload execution = 29 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-out = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . log creation = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962324029/pilotlog.txt
[2026-01-07 16:59:16] 2026-01-08 00:58:43,793 | WARNING  | 
[2026-01-07 16:59:16] [begin log extracts]
[2026-01-07 16:59:16] - Log from pilotlog.txt -
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962324029/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | extracted standard info from prmon json
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 16:59:16] 2026-01-08 00:58:43,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 16:59:16] 2026-01-08 00:58:43,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | WARNING  | wrong length of table data, x=[1767833772.0], y=[20123.0] (must be same and length>=4)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . Timing measurements:
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . get job = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . initial setup = 3 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload setup = 18 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-in = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . payload execution = 29 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . stage-out = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | . log creation = 0 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,782 | INFO     | ..............................
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:59:16] 2026-01-08 00:58:43,783 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962324029/pilotlog.txt
[2026-01-07 16:59:16] [end log extracts]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,793 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,794 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | 
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | job summary report
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | --------------------------------------------------
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | PanDA job id: 6962324029
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | task id: 47898826
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-07 16:56:25,821 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | pilot state: failed 
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | transexitcode: 65
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | exeerrorcode: 65
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | exitcode: 65
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | cpuconsumptiontime: 17 s
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | nevents: 0
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | neventsw: 0
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | pid: 166383
[2026-01-07 16:59:16] 2026-01-08 00:58:43,853 | INFO     | pgrp: 166383
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | corecount: 12
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | event service: False
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | sizes: {0: 2283789, 1: 2283988, 12: 2283988, 19: 2284278, 23: 2284306, 53: 2307698, 54: 2311990, 57: 2312018, 182: 2312184}
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | --------------------------------------------------
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | 
[2026-01-07 16:59:16] 2026-01-08 00:58:43,854 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-07 16:59:16] 2026-01-08 00:58:43,868 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 16:59:16] 2026-01-08 00:58:43,870 | INFO     | job 6962324029 has completed (purged errors)
[2026-01-07 16:59:16] 2026-01-08 00:58:43,870 | INFO     | overall cleanup function is called
[2026-01-07 16:59:16] 2026-01-08 00:58:44,878 | INFO     | --- collectZombieJob: --- 10, [166383]
[2026-01-07 16:59:16] 2026-01-08 00:58:44,878 | INFO     | zombie collector waiting for pid 166383
[2026-01-07 16:59:16] 2026-01-08 00:58:44,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 16:59:16] 2026-01-08 00:58:44,878 | INFO     | collected zombie processes
[2026-01-07 16:59:16] 2026-01-08 00:58:44,878 | INFO     | will attempt to kill all subprocesses of pid=166383
[2026-01-07 16:59:16] 2026-01-08 00:58:45,190 | INFO     | process IDs to be killed: [166383] (in reverse order)
[2026-01-07 16:59:16] 2026-01-08 00:58:45,432 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 16:59:16] 2026-01-08 00:58:45,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 16:59:16] 2026-01-08 00:58:45,451 | INFO     | did not find any defunct processes belonging to 166383
[2026-01-07 16:59:16] 2026-01-08 00:58:45,500 | INFO     | did not find any defunct processes belonging to 166383
[2026-01-07 16:59:16] 2026-01-08 00:58:45,500 | INFO     | ready for new job
[2026-01-07 16:59:16] 2026-01-08 00:58:45,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 16:59:16] 2026-01-08 00:58:45,502 | INFO     | ***************************************
[2026-01-07 16:59:16] 2026-01-08 00:58:45,503 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 16:59:16] 2026-01-08 00:58:45,503 | INFO     | ***************************************
[2026-01-07 16:59:16] 2026-01-08 00:58:45,503 | INFO     | 
[2026-01-07 16:59:16] 2026-01-08 00:58:45,507 | INFO     | architecture information:
[2026-01-07 16:59:16] 2026-01-08 00:58:45,507 | INFO     | executing command: cat /etc/os-release
[2026-01-07 16:59:16] 2026-01-08 00:58:45,572 | INFO     | cat /etc/os-release:
[2026-01-07 16:59:16] NAME="CentOS Linux"
[2026-01-07 16:59:16] VERSION="7 (Core)"
[2026-01-07 16:59:16] ID="centos"
[2026-01-07 16:59:16] ID_LIKE="rhel fedora"
[2026-01-07 16:59:16] VERSION_ID="7"
[2026-01-07 16:59:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 16:59:16] ANSI_COLOR="0;31"
[2026-01-07 16:59:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 16:59:16] HOME_URL="https://www.centos.org/"
[2026-01-07 16:59:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 16:59:16] 
[2026-01-07 16:59:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 16:59:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 16:59:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 16:59:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 16:59:16] 
[2026-01-07 16:59:16] 2026-01-08 00:58:45,572 | INFO     | ***************************************
[2026-01-07 16:59:16] 2026-01-08 00:58:46,076 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-07 16:59:16] 2026-01-08 00:58:46,106 | INFO     | sufficient remaining disk space (1713712922624 B)
[2026-01-07 16:59:16] 2026-01-08 00:58:46,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 16:59:16] 2026-01-08 00:58:46,107 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 16:59:16] 2026-01-08 00:58:46,107 | INFO     | update_server=False
[2026-01-07 16:59:16] 2026-01-08 00:58:46,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 16:59:16] 2026-01-08 00:58:46,175 | INFO     | all data control threads have been joined
[2026-01-07 16:59:16] 2026-01-08 00:58:46,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 16:59:16] 2026-01-08 00:58:46,697 | INFO     | aborting loop
[2026-01-07 16:59:16] 2026-01-08 00:58:46,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 16:59:16] 2026-01-08 00:58:47,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 16:59:16] 2026-01-08 00:58:47,113 | INFO     | [job] retrieve thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:47,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:47,186 | INFO     | [data] control thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:47,433 | INFO     | all payload control threads have been joined
[2026-01-07 16:59:16] 2026-01-08 00:58:47,434 | INFO     | all job control threads have been joined
[2026-01-07 16:59:16] 2026-01-08 00:58:47,703 | INFO     | [job] job monitor thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:47,828 | INFO     | [payload] failed_post thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,022 | INFO     | [job] validate thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,048 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,167 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,318 | INFO     | [data] copytool_in thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,439 | INFO     | [payload] control thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,440 | INFO     | [job] control thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,640 | INFO     | [payload] validate_post thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:48,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 16:59:16] 2026-01-08 00:58:48,903 | INFO     | [data] copytool_out thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:49,875 | INFO     | [job] queue monitor thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:58:51,034 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 16:59:16] 2026-01-08 00:59:10,795 | INFO     | [monitor] cgroup control has ended
[2026-01-07 16:59:16] 2026-01-08 00:59:11,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590445913920)>', '<ExcThread(monitor, started 140589236479744)>']
[2026-01-07 16:59:16] 2026-01-08 00:59:15,512 | INFO     | PID=159705 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | INFO     | .. there are 27 such processes running
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 16:59:16] 2026-01-08 00:59:15,513 | INFO     | [monitor] control thread has ended
[2026-01-07 16:59:16] 2026-01-08 00:59:16,464 | INFO     | all workflow threads have been joined
[2026-01-07 16:59:16] 2026-01-08 00:59:16,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 16:59:16] 2026-01-08 00:59:16,464 | INFO     | traces error code: 0
[2026-01-07 16:59:16] 2026-01-08 00:59:16,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 16:59:16] 2026-01-08 00:59:16,601 [wrapper] ==== pilot stdout END ====
[2026-01-07 16:59:16] 2026-01-08 00:59:16,603 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 16:59:16] 2026-01-08 00:59:16,605 [wrapper] pilotpid: 159705
[2026-01-07 16:59:16] 2026-01-08 00:59:16,606 [wrapper] Pilot exit status: 0
[2026-01-07 16:59:16] 2026-01-08 00:59:16,617 [wrapper] pandaids: 6962324029
[2026-01-07 16:59:16] 2026-01-08 00:59:16,658 [wrapper] cleanup supervisor_pilot  159711 159706
[2026-01-07 16:59:16] 2026-01-08 00:59:16,666 [wrapper] Test setup, not cleaning
[2026-01-07 16:59:16] 2026-01-08 00:59:16,668 [wrapper] apfmon messages muted
[2026-01-07 16:59:16] 2026-01-08 00:59:16,670 [wrapper] ==== wrapper stdout END ====
[2026-01-07 16:59:16] 2026-01-08 00:59:16,672 [wrapper] ==== wrapper stderr END ====
[2026-01-07 16:59:16]  *** Error codes and diagnostics ***
[2026-01-07 16:59:16]     "exeErrorCode": 65,
[2026-01-07 16:59:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 16:59:16]     "pilotErrorCode": 1305,
[2026-01-07 16:59:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 16:59:16]  *** Listing of results directory ***
[2026-01-07 16:59:16] total 224940
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc    579449 Jan  7 13:00 pilot3.tar.gz
[2026-01-07 16:59:16] -rwx------. 1 boinc boinc     36322 Jan  7 13:07 runpilot2-wrapper.sh
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc      5112 Jan  7 13:16 queuedata.json
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc       100 Jan  7 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 16:59:16] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 16:54 run_atlas
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc       105 Jan  7 16:54 job.xml
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc      6594 Jan  7 16:54 init_data.xml
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc 226198146 Jan  7 16:54 EVNT.47898824._000766.pool.root.1
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc     15847 Jan  7 16:54 start_atlas.sh
[2026-01-07 16:59:16] drwxrwx--x. 2 boinc boinc      4096 Jan  7 16:54 shared
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc    592403 Jan  7 16:54 input.tar.gz
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc         0 Jan  7 16:54 boinc_lockfile
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc      2516 Jan  7 16:54 pandaJob.out
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc    989777 Jan  7 16:55 agis_schedconf.cvmfs.json
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc   1516240 Jan  7 16:55 agis_ddmendpoints.agis.ALL.json
[2026-01-07 16:59:16] drwx------. 5 boinc boinc      4096 Jan  7 16:55 pilot3
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc       521 Jan  7 16:56 boinc_task_state.xml
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc       963 Jan  7 16:56 memory_monitor_summary.json
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc     21428 Jan  7 16:56 log.47898826._016541.job.log.tgz.1
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc      8399 Jan  7 16:58 heartbeat.json
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc      8192 Jan  7 16:59 boinc_mmap_file
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc        22 Jan  7 16:59 wrapper_checkpoint.txt
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc        95 Jan  7 16:59 pilot_heartbeat.json
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc      4822 Jan  7 16:59 pilotlog.txt
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc     88398 Jan  7 16:59 log.47898826._016541.job.log.1
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc       188 Jan  7 16:59 output.list
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc       620 Jan  7 16:59 runtime_log
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc    133120 Jan  7 16:59 result.tar.gz
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc      8636 Jan  7 16:59 runtime_log.err
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc       644 Jan  7 16:59 dTdMDmVvpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms7iKDm6SCBhn.diag
[2026-01-07 16:59:16] -rw-r--r--. 1 boinc boinc     21798 Jan  7 16:59 stderr.txt
[2026-01-07 16:59:16] No HITS result produced
[2026-01-07 16:59:16]  *** Contents of shared directory: ***
[2026-01-07 16:59:16] total 221632
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc 226198146 Jan  7 16:54 ATLAS.root_0
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc     15847 Jan  7 16:54 start_atlas.sh
[2026-01-07 16:59:16] -rw-r--r--. 2 boinc boinc    592403 Jan  7 16:54 input.tar.gz
[2026-01-07 16:59:16] -rw-------. 1 boinc boinc    133120 Jan  7 16:59 result.tar.gz
16:59:18 (155156): run_atlas exited; CPU time 24.733980
16:59:18 (155156): called boinc_finish(0)

</stderr_txt>
]]>

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