Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:46 (512801): wrapper (7.7.26015): starting
15:40:46 (512801): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 15:40:46] Arguments: --nthreads 4
[2026-01-11 15:40:46] Threads: 4
[2026-01-11 15:40:46] Checking for CVMFS
[2026-01-11 15:40:46] No cvmfs_config command found, will try listing directly
[2026-01-11 15:40:46] CVMFS is ok
[2026-01-11 15:40:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 15:40:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 15:40:46] Further information can be found at the LHC@home message board.
[2026-01-11 15:40:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 15:40:46] Checking for apptainer binary...
[2026-01-11 15:40:46] which: no apptainer in ((null))
[2026-01-11 15:40:46] apptainer is not installed, using version from CVMFS
[2026-01-11 15:40:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 15:40:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-01-11 15:40:47] apptainer works
[2026-01-11 15:40:47] Set ATHENA_PROC_NUMBER=4
[2026-01-11 15:40:47] Set ATHENA_CORE_NUMBER=4
[2026-01-11 15:40:47] Starting ATLAS job with PandaID=6962320712
[2026-01-11 15:40:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 19:51:09]  *** The last 200 lines of the pilot log: ***
[2026-01-11 19:51:09] 2026-01-11 18:49:30,745 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3986240/.job.ad'
[2026-01-11 19:51:09] 2026-01-11 18:49:30,745 | INFO     | total number of processed events: 400 (read)
[2026-01-11 19:51:09] 2026-01-11 18:49:30,746 | INFO     | executing command: lscpu
[2026-01-11 19:51:09] 2026-01-11 18:49:30,782 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 19:51:09] 2026-01-11 18:49:31,115 | INFO     | monitor loop #1091: job 0:6962320712 is in state 'finished'
[2026-01-11 19:51:09] 2026-01-11 18:49:31,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:51:09] 2026-01-11 18:49:32,704 | INFO     | time since job start (14915s) is within the limit (174528.0s)
[2026-01-11 19:51:09] 2026-01-11 18:49:33,618 | INFO     | monitor loop #1092: job 0:6962320712 is in state 'finished'
[2026-01-11 19:51:09] 2026-01-11 18:49:33,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,301 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 19:51:09] 2026-01-11 18:49:34,308 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2624.2473
[2026-01-11 19:51:09] 2026-01-11 18:49:34,316 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6962320712/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,317 | INFO     | extracted standard info from prmon json
[2026-01-11 19:51:09] 2026-01-11 18:49:34,317 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 19:51:09] 2026-01-11 18:49:34,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 19:51:09] 2026-01-11 18:49:34,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 19:51:09] 2026-01-11 18:49:34,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 19:51:09] 2026-01-11 18:49:34,323 | INFO     | fitting pss+swap vs Time
[2026-01-11 19:51:09] 2026-01-11 18:49:34,324 | INFO     | sum of square deviations: 4504437945.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,326 | INFO     | sum of deviations: -20705229267.999992
[2026-01-11 19:51:09] 2026-01-11 18:49:34,326 | INFO     | mean x: 1768149892.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,326 | INFO     | mean y: 2396381.1475409837
[2026-01-11 19:51:09] 2026-01-11 18:49:34,326 | INFO     | intersect: 8129925131.996397
[2026-01-11 19:51:09] 2026-01-11 18:49:34,327 | INFO     | chi2: 1.5883476933858942
[2026-01-11 19:51:09] 2026-01-11 18:49:34,327 | INFO     | sum of square deviations: 4233158440.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,329 | INFO     | sum of deviations: -20186580672.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,329 | INFO     | mean x: 1768149740.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,329 | INFO     | mean y: 2396672.736401674
[2026-01-11 19:51:09] 2026-01-11 18:49:34,329 | INFO     | intersect: 8434138095.267665
[2026-01-11 19:51:09] 2026-01-11 18:49:34,330 | INFO     | chi2: 1.5869601573212209
[2026-01-11 19:51:09] 2026-01-11 18:49:34,330 | INFO     | current chi2=1.5869601573212209 (change=0.08735719958868216 %)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,330 | INFO     | right removable region: 238
[2026-01-11 19:51:09] 2026-01-11 18:49:34,331 | INFO     | sum of square deviations: 4233158440.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,333 | INFO     | sum of deviations: -46349843011.99998
[2026-01-11 19:51:09] 2026-01-11 18:49:34,333 | INFO     | mean x: 1768150045.0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,333 | INFO     | mean y: 2410590.6569037656
[2026-01-11 19:51:09] 2026-01-11 18:49:34,333 | INFO     | intersect: 19362299470.08441
[2026-01-11 19:51:09] 2026-01-11 18:49:34,333 | INFO     | chi2: 0.3629695448538004
[2026-01-11 19:51:09] 2026-01-11 18:49:34,334 | INFO     | current chi2=0.3629695448538004 (change=77.14797922613184 %)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,334 | INFO     | sum of square deviations: 3972995422.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,336 | INFO     | sum of deviations: -35158639326.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,336 | INFO     | mean x: 1768150197.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,336 | INFO     | mean y: 2404017.269230769
[2026-01-11 19:51:09] 2026-01-11 18:49:34,336 | INFO     | intersect: 15649478443.009333
[2026-01-11 19:51:09] 2026-01-11 18:49:34,337 | INFO     | chi2: 0.31690849302131885
[2026-01-11 19:51:09] 2026-01-11 18:49:34,337 | INFO     | current chi2=0.31690849302131885 (change=12.690059671820226 %)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,337 | INFO     | left removable region: 20
[2026-01-11 19:51:09] 2026-01-11 18:49:34,338 | INFO     | sum of square deviations: 3212467674.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,339 | INFO     | sum of deviations: -8772439493.500002
[2026-01-11 19:51:09] 2026-01-11 18:49:34,339 | INFO     | mean x: 1768150319.5
[2026-01-11 19:51:09] 2026-01-11 18:49:34,339 | INFO     | mean y: 2387779.9770642202
[2026-01-11 19:51:09] 2026-01-11 18:49:34,340 | INFO     | intersect: 4830760627.539066
[2026-01-11 19:51:09] 2026-01-11 18:49:34,340 | INFO     | chi2: 0.13682740177425387
[2026-01-11 19:51:09] 2026-01-11 18:49:34,340 | INFO     | current memory leak: -2.73 B/s (using 218 data points, chi2=0.14)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,341 | INFO     | could have reported an average CPU frequency of 2619 MHz (12 samples)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,341 | INFO     | ..............................
[2026-01-11 19:51:09] 2026-01-11 18:49:34,341 | INFO     | . Timing measurements:
[2026-01-11 19:51:09] 2026-01-11 18:49:34,341 | INFO     | . get job = 0 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,341 | INFO     | . initial setup = 1 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | . payload setup = 5 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | . stage-in = 0 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | . payload execution = 14883 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | . stage-out = 1 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | . log creation = 0 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,342 | INFO     | ..............................
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | 
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | job summary report
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | --------------------------------------------------
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | PanDA job id: 6962320712
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | task id: 47898826
[2026-01-11 19:51:09] 2026-01-11 18:49:34,451 | INFO     | errors: (none)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | pilot state: finished 
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | transexitcode: 0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | exeerrorcode: 0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | exeerrordiag: 
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | exitcode: 0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | exitmsg: OK
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | cpuconsumptiontime: 57812 s
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | nevents: 400
[2026-01-11 19:51:09] 2026-01-11 18:49:34,452 | INFO     | neventsw: 0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | pid: 523326
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | pgrp: 523326
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | corecount: 4
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | event service: False
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | sizes: {0: 2283864, 1: 2284006, 5: 2284268, 11: 2284324, 14892: 2315344, 14894: 2324364, 14896: 2324548, 14902: 2324742}
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | --------------------------------------------------
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | 
[2026-01-11 19:51:09] 2026-01-11 18:49:34,453 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-01-11 19:51:09] 2026-01-11 18:49:34,471 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,474 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 19:51:09] 2026-01-11 18:49:34,474 | INFO     | job 6962320712 has completed (purged errors)
[2026-01-11 19:51:09] 2026-01-11 18:49:34,474 | INFO     | overall cleanup function is called
[2026-01-11 19:51:09] 2026-01-11 18:49:35,483 | INFO     | --- collectZombieJob: --- 10, [523326]
[2026-01-11 19:51:09] 2026-01-11 18:49:35,483 | INFO     | zombie collector waiting for pid 523326
[2026-01-11 19:51:09] 2026-01-11 18:49:35,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 19:51:09] 2026-01-11 18:49:35,483 | INFO     | collected zombie processes
[2026-01-11 19:51:09] 2026-01-11 18:49:35,483 | INFO     | will attempt to kill all subprocesses of pid=523326
[2026-01-11 19:51:09] 2026-01-11 18:49:35,802 | INFO     | process IDs to be killed: [523326] (in reverse order)
[2026-01-11 19:51:09] 2026-01-11 18:49:35,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 19:51:09] 2026-01-11 18:49:35,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 19:51:09] 2026-01-11 18:49:35,883 | INFO     | did not find any defunct processes belonging to 523326
[2026-01-11 19:51:09] 2026-01-11 18:49:35,891 | INFO     | did not find any defunct processes belonging to 523326
[2026-01-11 19:51:09] 2026-01-11 18:49:35,892 | INFO     | ready for new job
[2026-01-11 19:51:09] 2026-01-11 18:49:35,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 19:51:09] 2026-01-11 18:49:35,894 | INFO     | ***************************************
[2026-01-11 19:51:09] 2026-01-11 18:49:35,894 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 19:51:09] 2026-01-11 18:49:35,894 | INFO     | ***************************************
[2026-01-11 19:51:09] 2026-01-11 18:49:35,894 | INFO     | 
[2026-01-11 19:51:09] 2026-01-11 18:49:35,897 | INFO     | architecture information:
[2026-01-11 19:51:09] 2026-01-11 18:49:35,897 | INFO     | executing command: cat /etc/os-release
[2026-01-11 19:51:09] 2026-01-11 18:49:35,911 | INFO     | cat /etc/os-release:
[2026-01-11 19:51:09] NAME="CentOS Linux"
[2026-01-11 19:51:09] VERSION="7 (Core)"
[2026-01-11 19:51:09] ID="centos"
[2026-01-11 19:51:09] ID_LIKE="rhel fedora"
[2026-01-11 19:51:09] VERSION_ID="7"
[2026-01-11 19:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 19:51:09] ANSI_COLOR="0;31"
[2026-01-11 19:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 19:51:09] HOME_URL="https://www.centos.org/"
[2026-01-11 19:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 19:51:09] 
[2026-01-11 19:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 19:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 19:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 19:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 19:51:09] 
[2026-01-11 19:51:09] 2026-01-11 18:49:35,911 | INFO     | ***************************************
[2026-01-11 19:51:09] 2026-01-11 18:49:36,415 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-01-11 19:51:09] 2026-01-11 18:49:36,430 | INFO     | sufficient remaining disk space (1679531442176 B)
[2026-01-11 19:51:09] 2026-01-11 18:49:36,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 19:51:09] 2026-01-11 18:49:36,430 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 19:51:09] 2026-01-11 18:49:36,430 | INFO     | update_server=False
[2026-01-11 19:51:09] 2026-01-11 18:49:36,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 19:51:09] 2026-01-11 18:49:36,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 19:51:09] 2026-01-11 18:49:36,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 19:51:09] 2026-01-11 18:49:36,490 | INFO     | all payload control threads have been joined
[2026-01-11 19:51:09] 2026-01-11 18:49:36,611 | INFO     | all data control threads have been joined
[2026-01-11 19:51:09] 2026-01-11 18:49:37,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 19:51:09] 2026-01-11 18:49:37,125 | INFO     | aborting loop
[2026-01-11 19:51:09] 2026-01-11 18:49:37,436 | INFO     | [job] retrieve thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:37,436 | INFO     | [job] queue monitor thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:37,496 | INFO     | [payload] control thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:37,515 | INFO     | all job control threads have been joined
[2026-01-11 19:51:09] 2026-01-11 18:49:37,617 | INFO     | [data] control thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:37,766 | INFO     | [job] validate thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:37,954 | INFO     | [data] copytool_in thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,131 | INFO     | [job] job monitor thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,299 | INFO     | [payload] validate_post thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,436 | INFO     | [data] copytool_out thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,455 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,520 | INFO     | [job] control thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,756 | INFO     | [payload] failed_post thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,862 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:38,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 19:51:09] 2026-01-11 18:49:42,968 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:49:47,015 | INFO     | job.realtimelogging is not enabled
[2026-01-11 19:51:09] 2026-01-11 18:49:48,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 19:51:09] 2026-01-11 18:50:06,204 | INFO     | PID=516512 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 19:51:09] 2026-01-11 18:50:06,204 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 19:51:09] 2026-01-11 18:50:06,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 19:51:09] 2026-01-11 18:50:06,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 19:51:09] 2026-01-11 18:50:18,131 | INFO     | [monitor] cgroup control has ended
[2026-01-11 19:51:09] 2026-01-11 18:50:19,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22504098424640)>', '<ExcThread(monitor, started 22503852295936)>']
[2026-01-11 19:51:09] 2026-01-11 18:50:20,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 19:51:09] 2026-01-11 18:50:20,269 | INFO     | [monitor] control thread has ended
[2026-01-11 19:51:09] 2026-01-11 18:50:24,413 | INFO     | all workflow threads have been joined
[2026-01-11 19:51:09] 2026-01-11 18:50:24,413 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 19:51:09] 2026-01-11 18:50:24,413 | INFO     | traces error code: 0
[2026-01-11 19:51:09] 2026-01-11 18:50:24,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 19:51:09] 2026-01-11 18:50:24,539 [wrapper] ==== pilot stdout END ====
[2026-01-11 19:51:09] 2026-01-11 18:50:24,543 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 19:51:09] 2026-01-11 18:50:24,545 [wrapper] pilotpid: 516512
[2026-01-11 19:51:09] 2026-01-11 18:50:24,548 [wrapper] Pilot exit status: 0
[2026-01-11 19:51:09] 2026-01-11 18:50:24,557 [wrapper] pandaids: 6962320712
[2026-01-11 19:51:09] 2026-01-11 18:50:24,613 [wrapper] cleanup supervisor_pilot  637066 516513
[2026-01-11 19:51:09] 2026-01-11 18:50:24,615 [wrapper] Test setup, not cleaning
[2026-01-11 19:51:09] 2026-01-11 18:50:24,618 [wrapper] apfmon messages muted
[2026-01-11 19:51:09] 2026-01-11 18:50:24,620 [wrapper] ==== wrapper stdout END ====
[2026-01-11 19:51:09] 2026-01-11 18:50:24,622 [wrapper] ==== wrapper stderr END ====
[2026-01-11 19:51:09]  *** Error codes and diagnostics ***
[2026-01-11 19:51:09]     "exeErrorCode": 0,
[2026-01-11 19:51:09]     "exeErrorDiag": "",
[2026-01-11 19:51:09]     "pilotErrorCode": 0,
[2026-01-11 19:51:09]     "pilotErrorDiag": "",
[2026-01-11 19:51:09]  *** Listing of results directory ***
[2026-01-11 19:51:09] total 437436
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 19:51:09] -rwx------ 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc       100 Jan 11 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 19:51:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 15:40 run_atlas
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc       105 Jan 11 15:40 job.xml
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc 224089829 Jan 11 15:40 EVNT.47898824._000678.pool.root.1
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc      6424 Jan 11 15:40 init_data.xml
[2026-01-11 19:51:09] drwxrwx--x 2 boinc boinc      4096 Jan 11 15:40 shared
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc    592400 Jan 11 15:40 input.tar.gz
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc     15847 Jan 11 15:40 start_atlas.sh
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc         0 Jan 11 15:40 boinc_lockfile
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc      2518 Jan 11 15:40 pandaJob.out
[2026-01-11 19:51:09] -rw------- 1 boinc boinc    989556 Jan 11 15:40 agis_schedconf.cvmfs.json
[2026-01-11 19:51:09] drwx------ 5 boinc boinc      4096 Jan 11 15:40 pilot3
[2026-01-11 19:51:09] -rw------- 1 boinc boinc 215016669 Jan 11 19:48 HITS.47898826._014467.pool.root.1
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc       529 Jan 11 19:48 boinc_task_state.xml
[2026-01-11 19:51:09] -rw------- 1 boinc boinc        95 Jan 11 19:49 pilot_heartbeat.json
[2026-01-11 19:51:09] -rw------- 1 boinc boinc      1034 Jan 11 19:49 memory_monitor_summary.json
[2026-01-11 19:51:09] -rw------- 1 boinc boinc   1516240 Jan 11 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-11 19:51:09] -rw------- 1 boinc boinc    397701 Jan 11 19:49 log.47898826._014467.job.log.tgz.1
[2026-01-11 19:51:09] -rw------- 1 boinc boinc      7827 Jan 11 19:49 heartbeat.json
[2026-01-11 19:51:09] -rw------- 1 boinc boinc      4830 Jan 11 19:50 pilotlog.txt
[2026-01-11 19:51:09] -rw------- 1 boinc boinc   2058578 Jan 11 19:50 log.47898826._014467.job.log.1
[2026-01-11 19:51:09] -rw------- 1 boinc boinc       357 Jan 11 19:50 output.list
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc       620 Jan 11 19:50 runtime_log
[2026-01-11 19:51:09] -rw------- 1 boinc boinc   2478080 Jan 11 19:50 result.tar.gz
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc      9206 Jan 11 19:50 runtime_log.err
[2026-01-11 19:51:09] -rw------- 1 boinc boinc       665 Jan 11 19:50 GyfMDmExpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT1dKDmYMUZkn.diag
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc        26 Jan 11 19:50 wrapper_checkpoint.txt
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc      8192 Jan 11 19:51 boinc_mmap_file
[2026-01-11 19:51:09] -rw-r--r-- 1 boinc boinc     21205 Jan 11 19:51 stderr.txt
[2026-01-11 19:51:09] HITS file was successfully produced:
[2026-01-11 19:51:09] -rw------- 1 boinc boinc 215016669 Jan 11 19:48 shared/HITS.pool.root.1
[2026-01-11 19:51:09]  *** Contents of shared directory: ***
[2026-01-11 19:51:09] total 431840
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc 224089829 Jan 11 15:40 ATLAS.root_0
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc    592400 Jan 11 15:40 input.tar.gz
[2026-01-11 19:51:09] -rw-r--r-- 2 boinc boinc     15847 Jan 11 15:40 start_atlas.sh
[2026-01-11 19:51:09] -rw------- 1 boinc boinc 215016669 Jan 11 19:48 HITS.pool.root.1
[2026-01-11 19:51:09] -rw------- 1 boinc boinc   2478080 Jan 11 19:50 result.tar.gz
19:51:11 (512801): run_atlas exited; CPU time 58361.531801
19:51:11 (512801): called boinc_finish(0)

</stderr_txt>
]]>

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