Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:58:45 (2651417): wrapper (7.7.26015): starting
01:58:45 (2651417): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 01:58:45] Arguments: --nthreads 4
[2026-01-09 01:58:45] Threads: 4
[2026-01-09 01:58:45] Checking for CVMFS
[2026-01-09 01:58:45] No cvmfs_config command found, will try listing directly
[2026-01-09 01:58:45] CVMFS is ok
[2026-01-09 01:58:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:58:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:58:45] Further information can be found at the LHC@home message board.
[2026-01-09 01:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:58:45] Checking for apptainer binary...
[2026-01-09 01:58:45] which: no apptainer in ((null))
[2026-01-09 01:58:45] apptainer is not installed, using version from CVMFS
[2026-01-09 01:58:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:58:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-09 01:58:46] apptainer works
[2026-01-09 01:58:46] Set ATHENA_PROC_NUMBER=4
[2026-01-09 01:58:46] Set ATHENA_CORE_NUMBER=4
[2026-01-09 01:58:46] Starting ATLAS job with PandaID=6962323120
[2026-01-09 01:58:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:04:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:04:42] 2026-01-09 05:03:50,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:04:42] 2026-01-09 05:03:50,555 | INFO     | time since job start (14690s) is within the limit (174528.0s)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,156 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:04:42] 2026-01-09 05:03:51,174 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2688.7019453124994
[2026-01-09 06:04:42] 2026-01-09 05:03:51,199 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6962323120/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,200 | INFO     | extracted standard info from prmon json
[2026-01-09 06:04:42] 2026-01-09 05:03:51,200 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:04:42] 2026-01-09 05:03:51,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:04:42] 2026-01-09 05:03:51,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:04:42] 2026-01-09 05:03:51,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:04:42] 2026-01-09 05:03:51,205 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:04:42] 2026-01-09 05:03:51,206 | INFO     | sum of square deviations: 4340323240.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,208 | INFO     | sum of deviations: 6593682455.000002
[2026-01-09 06:04:42] 2026-01-09 05:03:51,208 | INFO     | mean x: 1767927696.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,208 | INFO     | mean y: 2320498.8215767634
[2026-01-09 06:04:42] 2026-01-09 05:03:51,208 | INFO     | intersect: -2683459611.6071978
[2026-01-09 06:04:42] 2026-01-09 05:03:51,208 | INFO     | chi2: 2.059906178926206
[2026-01-09 06:04:42] 2026-01-09 05:03:51,209 | INFO     | sum of square deviations: 4075741535.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,210 | INFO     | sum of deviations: 21094756723.99999
[2026-01-09 06:04:42] 2026-01-09 05:03:51,211 | INFO     | mean x: 1767927543.5
[2026-01-09 06:04:42] 2026-01-09 05:03:51,211 | INFO     | mean y: 2328713.1440677964
[2026-01-09 06:04:42] 2026-01-09 05:03:51,211 | INFO     | intersect: -9147908394.76209
[2026-01-09 06:04:42] 2026-01-09 05:03:51,211 | INFO     | chi2: 1.2942996793789052
[2026-01-09 06:04:42] 2026-01-09 05:03:51,211 | INFO     | current chi2=1.2942996793789052 (change=37.16705679995574 %)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,212 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,213 | INFO     | sum of deviations: 20504953031.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,213 | INFO     | mean x: 1767927391.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,213 | INFO     | mean y: 2328358.4415584416
[2026-01-09 06:04:42] 2026-01-09 05:03:51,213 | INFO     | intersect: -9482227062.066803
[2026-01-09 06:04:42] 2026-01-09 05:03:51,214 | INFO     | chi2: 1.2948765280602708
[2026-01-09 06:04:42] 2026-01-09 05:03:51,214 | INFO     | current chi2=1.2948765280602708 (change=-0.04456840178175353 %)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,214 | INFO     | right removable region: 230
[2026-01-09 06:04:42] 2026-01-09 05:03:51,214 | INFO     | sum of square deviations: 4075741535.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,216 | INFO     | sum of deviations: -19071391939.499996
[2026-01-09 06:04:42] 2026-01-09 05:03:51,216 | INFO     | mean x: 1767927848.5
[2026-01-09 06:04:42] 2026-01-09 05:03:51,216 | INFO     | mean y: 2335085.088983051
[2026-01-09 06:04:42] 2026-01-09 05:03:51,216 | INFO     | intersect: 8274902084.237635
[2026-01-09 06:04:42] 2026-01-09 05:03:51,217 | INFO     | chi2: 0.8392921405617876
[2026-01-09 06:04:42] 2026-01-09 05:03:51,217 | INFO     | current chi2=0.8392921405617876 (change=59.255807417438 %)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,217 | INFO     | sum of square deviations: 3822136780.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | sum of deviations: -13561808286.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | mean x: 1767928001.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | mean y: 2331768.7835497838
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | intersect: 6275341342.505088
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | chi2: 0.8218691387466067
[2026-01-09 06:04:42] 2026-01-09 05:03:51,219 | INFO     | current chi2=0.8218691387466067 (change=2.07591623621289 %)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,220 | INFO     | left removable region: 20
[2026-01-09 06:04:42] 2026-01-09 05:03:51,220 | INFO     | sum of square deviations: 2871616632.5
[2026-01-09 06:04:42] 2026-01-09 05:03:51,221 | INFO     | sum of deviations: 7155455733.0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,221 | INFO     | mean x: 1767927970.5
[2026-01-09 06:04:42] 2026-01-09 05:03:51,222 | INFO     | mean y: 2335895.123809524
[2026-01-09 06:04:42] 2026-01-09 05:03:51,222 | INFO     | intersect: -4402963262.4563
[2026-01-09 06:04:42] 2026-01-09 05:03:51,222 | INFO     | chi2: 0.0004940016250640138
[2026-01-09 06:04:42] 2026-01-09 05:03:51,224 | INFO     | current memory leak: 2.49 B/s (using 210 data points, chi2=0.00)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,225 | INFO     | could have reported an average CPU frequency of 2645 MHz (12 samples)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,225 | INFO     | ..............................
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . Timing measurements:
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . get job = 0 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . initial setup = 1 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . payload setup = 9 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . stage-in = 0 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . payload execution = 14648 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . stage-out = 1 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | . log creation = 0 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,226 | INFO     | ..............................
[2026-01-09 06:04:42] 2026-01-09 05:03:51,326 | INFO     | 
[2026-01-09 06:04:42] 2026-01-09 05:03:51,326 | INFO     | job summary report
[2026-01-09 06:04:42] 2026-01-09 05:03:51,326 | INFO     | --------------------------------------------------
[2026-01-09 06:04:42] 2026-01-09 05:03:51,326 | INFO     | PanDA job id: 6962323120
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | task id: 47898826
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | errors: (none)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | pilot state: finished 
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | transexitcode: 0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | exeerrorcode: 0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | exeerrordiag: 
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | exitcode: 0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | exitmsg: OK
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | cpuconsumptiontime: 56563 s
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | nevents: 400
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | neventsw: 0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,327 | INFO     | pid: 2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | pgrp: 2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | corecount: 4
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | event service: False
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | sizes: {0: 2283810, 1: 2284009, 8: 2284271, 12: 2284299, 14662: 2315629, 14663: 2324651, 14665: 2324835, 14673: 2325029}
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | --------------------------------------------------
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | 
[2026-01-09 06:04:42] 2026-01-09 05:03:51,328 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-09 06:04:42] 2026-01-09 05:03:51,359 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,362 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:04:42] 2026-01-09 05:03:51,362 | INFO     | job 6962323120 has completed (purged errors)
[2026-01-09 06:04:42] 2026-01-09 05:03:51,362 | INFO     | overall cleanup function is called
[2026-01-09 06:04:42] 2026-01-09 05:03:52,372 | INFO     | --- collectZombieJob: --- 10, [2663221]
[2026-01-09 06:04:42] 2026-01-09 05:03:52,372 | INFO     | zombie collector waiting for pid 2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:52,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:04:42] 2026-01-09 05:03:52,372 | INFO     | collected zombie processes
[2026-01-09 06:04:42] 2026-01-09 05:03:52,372 | INFO     | will attempt to kill all subprocesses of pid=2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:53,185 | INFO     | process IDs to be killed: [2663221] (in reverse order)
[2026-01-09 06:04:42] 2026-01-09 05:03:53,441 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:04:42] 2026-01-09 05:03:53,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:04:42] 2026-01-09 05:03:53,478 | INFO     | did not find any defunct processes belonging to 2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:53,513 | INFO     | did not find any defunct processes belonging to 2663221
[2026-01-09 06:04:42] 2026-01-09 05:03:53,513 | INFO     | ready for new job
[2026-01-09 06:04:42] 2026-01-09 05:03:53,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:04:42] 2026-01-09 05:03:53,516 | INFO     | ***************************************
[2026-01-09 06:04:42] 2026-01-09 05:03:53,516 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:04:42] 2026-01-09 05:03:53,516 | INFO     | ***************************************
[2026-01-09 06:04:42] 2026-01-09 05:03:53,516 | INFO     | 
[2026-01-09 06:04:42] 2026-01-09 05:03:53,525 | INFO     | architecture information:
[2026-01-09 06:04:42] 2026-01-09 05:03:53,525 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:04:42] 2026-01-09 05:03:53,551 | INFO     | cat /etc/os-release:
[2026-01-09 06:04:42] NAME="CentOS Linux"
[2026-01-09 06:04:42] VERSION="7 (Core)"
[2026-01-09 06:04:42] ID="centos"
[2026-01-09 06:04:42] ID_LIKE="rhel fedora"
[2026-01-09 06:04:42] VERSION_ID="7"
[2026-01-09 06:04:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:04:42] ANSI_COLOR="0;31"
[2026-01-09 06:04:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:04:42] HOME_URL="https://www.centos.org/"
[2026-01-09 06:04:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:04:42] 
[2026-01-09 06:04:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:04:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:04:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:04:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:04:42] 
[2026-01-09 06:04:42] 2026-01-09 05:03:53,551 | INFO     | ***************************************
[2026-01-09 06:04:42] 2026-01-09 05:03:54,054 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-09 06:04:42] 2026-01-09 05:03:54,082 | INFO     | sufficient remaining disk space (3287067656192 B)
[2026-01-09 06:04:42] 2026-01-09 05:03:54,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:04:42] 2026-01-09 05:03:54,083 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:04:42] 2026-01-09 05:03:54,083 | INFO     | update_server=False
[2026-01-09 06:04:42] 2026-01-09 05:03:54,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:04:42] 2026-01-09 05:03:54,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:04:42] 2026-01-09 05:03:54,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:04:42] 2026-01-09 05:03:54,085 | INFO     | aborting loop
[2026-01-09 06:04:42] 2026-01-09 05:03:54,822 | INFO     | all job control threads have been joined
[2026-01-09 06:04:42] 2026-01-09 05:03:55,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:04:42] 2026-01-09 05:03:55,041 | INFO     | all payload control threads have been joined
[2026-01-09 06:04:42] 2026-01-09 05:03:55,088 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:55,090 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:55,144 | INFO     | all data control threads have been joined
[2026-01-09 06:04:42] 2026-01-09 05:03:55,259 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:55,317 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:55,473 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:55,827 | INFO     | [job] control thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,001 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,046 | INFO     | [payload] control thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,149 | INFO     | [data] control thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,283 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:04:42] 2026-01-09 05:03:56,439 | INFO     | [job] validate thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,549 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:56,591 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:57,017 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:57,342 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:03:58,090 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:04:42] 2026-01-09 05:04:24,587 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:04:42] 2026-01-09 05:04:24,659 | INFO     | PID=2655408 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:04:42] 2026-01-09 05:04:24,659 | INFO     | .. there are 3 such processes running
[2026-01-09 06:04:42] 2026-01-09 05:04:24,660 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:04:42] 2026-01-09 05:04:24,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:04:42] 2026-01-09 05:04:24,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:04:42] 2026-01-09 05:04:25,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23105779885888)>', '<ExcThread(monitor, started 23105537795840)>']
[2026-01-09 06:04:42] 2026-01-09 05:04:25,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:04:42] 2026-01-09 05:04:25,665 | INFO     | [monitor] control thread has ended
[2026-01-09 06:04:42] 2026-01-09 05:04:30,618 | INFO     | all workflow threads have been joined
[2026-01-09 06:04:42] 2026-01-09 05:04:30,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:04:42] 2026-01-09 05:04:30,618 | INFO     | traces error code: 0
[2026-01-09 06:04:42] 2026-01-09 05:04:30,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:04:42] 2026-01-09 05:04:30,760 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:04:42] 2026-01-09 05:04:30,764 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:04:42] 2026-01-09 05:04:30,769 [wrapper] pilotpid: 2655408
[2026-01-09 06:04:42] 2026-01-09 05:04:30,773 [wrapper] Pilot exit status: 0
[2026-01-09 06:04:42] 2026-01-09 05:04:30,788 [wrapper] pandaids: 6962323120
[2026-01-09 06:04:42] 2026-01-09 05:04:30,970 [wrapper] cleanup supervisor_pilot 2969836 2655409
[2026-01-09 06:04:42] 2026-01-09 05:04:30,974 [wrapper] Test setup, not cleaning
[2026-01-09 06:04:42] 2026-01-09 05:04:30,979 [wrapper] apfmon messages muted
[2026-01-09 06:04:42] 2026-01-09 05:04:30,983 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:04:42] 2026-01-09 05:04:30,987 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:04:42]  *** Error codes and diagnostics ***
[2026-01-09 06:04:42]     "exeErrorCode": 0,
[2026-01-09 06:04:42]     "exeErrorDiag": "",
[2026-01-09 06:04:42]     "pilotErrorCode": 0,
[2026-01-09 06:04:42]     "pilotErrorDiag": "",
[2026-01-09 06:04:42]  *** Listing of results directory ***
[2026-01-09 06:04:42] total 439864
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 06:04:42] -rwx------ 1 boinc boinc     36322 Jan  7 22:07 runpilot2-wrapper.sh
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc       100 Jan  9 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:04:42] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 01:58 run_atlas
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc       105 Jan  9 01:58 job.xml
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc      6690 Jan  9 01:58 init_data.xml
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc 224018009 Jan  9 01:58 EVNT.47898824._000738.pool.root.1
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:58 start_atlas.sh
[2026-01-09 06:04:42] drwxrwx--x 2 boinc boinc      4096 Jan  9 01:58 shared
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc    592403 Jan  9 01:58 input.tar.gz
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:58 boinc_lockfile
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc      2519 Jan  9 01:58 pandaJob.out
[2026-01-09 06:04:42] -rw------- 1 boinc boinc    989837 Jan  9 01:58 agis_schedconf.cvmfs.json
[2026-01-09 06:04:42] drwx------ 5 boinc boinc      4096 Jan  9 01:59 pilot3
[2026-01-09 06:04:42] -rw------- 1 boinc boinc 217614698 Jan  9 06:03 HITS.47898826._015850.pool.root.1
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc       529 Jan  9 06:03 boinc_task_state.xml
[2026-01-09 06:04:42] -rw------- 1 boinc boinc      1028 Jan  9 06:03 memory_monitor_summary.json
[2026-01-09 06:04:42] -rw------- 1 boinc boinc   1516240 Jan  9 06:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:04:42] -rw------- 1 boinc boinc    407442 Jan  9 06:03 log.47898826._015850.job.log.tgz.1
[2026-01-09 06:04:42] -rw------- 1 boinc boinc      7787 Jan  9 06:03 heartbeat.json
[2026-01-09 06:04:42] -rw------- 1 boinc boinc        95 Jan  9 06:04 pilot_heartbeat.json
[2026-01-09 06:04:42] -rw------- 1 boinc boinc      4835 Jan  9 06:04 pilotlog.txt
[2026-01-09 06:04:42] -rw------- 1 boinc boinc   2029837 Jan  9 06:04 log.47898826._015850.job.log.1
[2026-01-09 06:04:42] -rw------- 1 boinc boinc       357 Jan  9 06:04 output.list
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc       620 Jan  9 06:04 runtime_log
[2026-01-09 06:04:42] -rw------- 1 boinc boinc   2457600 Jan  9 06:04 result.tar.gz
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc      9223 Jan  9 06:04 runtime_log.err
[2026-01-09 06:04:42] -rw------- 1 boinc boinc       666 Jan  9 06:04 1goLDmKvpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml6iKDmMOLmRo.diag
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc        26 Jan  9 06:04 wrapper_checkpoint.txt
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc      8192 Jan  9 06:04 boinc_mmap_file
[2026-01-09 06:04:42] -rw-r--r-- 1 boinc boinc     20907 Jan  9 06:04 stderr.txt
[2026-01-09 06:04:42] HITS file was successfully produced:
[2026-01-09 06:04:42] -rw------- 1 boinc boinc 217614698 Jan  9 06:03 shared/HITS.pool.root.1
[2026-01-09 06:04:42]  *** Contents of shared directory: ***
[2026-01-09 06:04:42] total 434288
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc 224018009 Jan  9 01:58 ATLAS.root_0
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:58 start_atlas.sh
[2026-01-09 06:04:42] -rw-r--r-- 2 boinc boinc    592403 Jan  9 01:58 input.tar.gz
[2026-01-09 06:04:42] -rw------- 1 boinc boinc 217614698 Jan  9 06:03 HITS.pool.root.1
[2026-01-09 06:04:42] -rw------- 1 boinc boinc   2457600 Jan  9 06:04 result.tar.gz
06:04:43 (2651417): run_atlas exited; CPU time 57645.668185
06:04:43 (2651417): called boinc_finish(0)

</stderr_txt>
]]>

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