Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:48:57 (23895): wrapper (7.7.26015): starting
12:48:57 (23895): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:48:57] Arguments: --nthreads 8
[2026-01-08 12:48:57] Threads: 8
[2026-01-08 12:48:57] Checking for CVMFS
[2026-01-08 12:48:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:48:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:48:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:49:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:49:00] 2.11.2.0 15502 33918 98368 154906 1 60 22450336 25165824 96 130560 0 16034259 99.871 8123753 3377 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 12:49:00] CVMFS is ok
[2026-01-08 12:49:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:49:00] Checking for apptainer binary...
[2026-01-08 12:49:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:49:00] Running /usr/bin/apptainer --version
[2026-01-08 12:49:00] apptainer version 1.3.2-1.el7
[2026-01-08 12:49:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:49:14] cg-vwn488.simple-grid.lan
[2026-01-08 12:49:14] apptainer works
[2026-01-08 12:49:14] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:49:14] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:49:14] Starting ATLAS job with PandaID=6962323442
[2026-01-08 12:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:29:30]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:29:30] 2026-01-08 17:28:14,844 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:29:30] 2026-01-08 17:28:14,845 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 18:29:30] 2026-01-08 17:28:14,847 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6962323442/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,847 | INFO     | extracted standard info from prmon json
[2026-01-08 18:29:30] 2026-01-08 17:28:14,848 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:29:30] 2026-01-08 17:28:14,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:29:30] 2026-01-08 17:28:14,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:29:30] 2026-01-08 17:28:14,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:29:30] 2026-01-08 17:28:14,854 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:29:30] 2026-01-08 17:28:14,855 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,858 | INFO     | sum of deviations: 127342473878.99998
[2026-01-08 18:29:30] 2026-01-08 17:28:14,858 | INFO     | mean x: 1767883458.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,858 | INFO     | mean y: 2456064.4388714735
[2026-01-08 18:29:30] 2026-01-08 17:28:14,858 | INFO     | intersect: -22363151970.30836
[2026-01-08 18:29:30] 2026-01-08 17:28:14,859 | INFO     | chi2: 7.961970525102588
[2026-01-08 18:29:30] 2026-01-08 17:28:14,859 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,862 | INFO     | sum of deviations: 145962430713.00006
[2026-01-08 18:29:30] 2026-01-08 17:28:14,863 | INFO     | mean x: 1767883305.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,863 | INFO     | mean y: 2462071.159235669
[2026-01-08 18:29:30] 2026-01-08 17:28:14,863 | INFO     | intersect: -26877689815.536366
[2026-01-08 18:29:30] 2026-01-08 17:28:14,863 | INFO     | chi2: 7.251991814826299
[2026-01-08 18:29:30] 2026-01-08 17:28:14,863 | INFO     | current chi2=7.251991814826299 (change=8.917123066932492 %)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,864 | INFO     | right removable region: 313
[2026-01-08 18:29:30] 2026-01-08 17:28:14,864 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,867 | INFO     | sum of deviations: 14907844381.499996
[2026-01-08 18:29:30] 2026-01-08 17:28:14,867 | INFO     | mean x: 1767883610.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,867 | INFO     | mean y: 2492846.391719745
[2026-01-08 18:29:30] 2026-01-08 17:28:14,868 | INFO     | intersect: -2742906695.494854
[2026-01-08 18:29:30] 2026-01-08 17:28:14,868 | INFO     | chi2: 3.05131964243536
[2026-01-08 18:29:30] 2026-01-08 17:28:14,868 | INFO     | current chi2=3.05131964243536 (change=61.67632581890218 %)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,869 | INFO     | sum of square deviations: 9148487810.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,872 | INFO     | sum of deviations: -55801926785.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,872 | INFO     | mean x: 1767883763.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,872 | INFO     | mean y: 2516672.55987055
[2026-01-08 18:29:30] 2026-01-08 17:28:14,872 | INFO     | intersect: 10785863861.314148
[2026-01-08 18:29:30] 2026-01-08 17:28:14,873 | INFO     | chi2: 1.0078456465176382
[2026-01-08 18:29:30] 2026-01-08 17:28:14,873 | INFO     | current chi2=1.0078456465176382 (change=66.97017144643546 %)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,873 | INFO     | sum of square deviations: 8711530780.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,876 | INFO     | sum of deviations: -54701437039.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,876 | INFO     | mean x: 1767883915.5
[2026-01-08 18:29:30] 2026-01-08 17:28:14,876 | INFO     | mean y: 2516261.884868421
[2026-01-08 18:29:30] 2026-01-08 17:28:14,877 | INFO     | intersect: 11103411516.584066
[2026-01-08 18:29:30] 2026-01-08 17:28:14,877 | INFO     | chi2: 0.97881112191221
[2026-01-08 18:29:30] 2026-01-08 17:28:14,877 | INFO     | current chi2=0.97881112191221 (change=2.880850327205346 %)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,877 | INFO     | left removable region: 30
[2026-01-08 18:29:30] 2026-01-08 17:28:14,878 | INFO     | sum of square deviations: 7028008982.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,880 | INFO     | sum of deviations: -3934848309.9999957
[2026-01-08 18:29:30] 2026-01-08 17:28:14,880 | INFO     | mean x: 1767884190.0
[2026-01-08 18:29:30] 2026-01-08 17:28:14,880 | INFO     | mean y: 2511849.915194346
[2026-01-08 18:29:30] 2026-01-08 17:28:14,881 | INFO     | intersect: 992316520.78481
[2026-01-08 18:29:30] 2026-01-08 17:28:14,881 | INFO     | chi2: 0.10264280523798124
[2026-01-08 18:29:30] 2026-01-08 17:28:14,881 | INFO     | current memory leak: -0.56 B/s (using 283 data points, chi2=0.10)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | ..............................
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . Timing measurements:
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . get job = 0 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . initial setup = 11 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . payload setup = 145 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . stage-in = 0 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . payload execution = 19599 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . stage-out = 4 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,882 | INFO     | . log creation = 1 s
[2026-01-08 18:29:30] 2026-01-08 17:28:14,883 | INFO     | ..............................
[2026-01-08 18:29:30] 2026-01-08 17:28:14,977 | INFO     | time since job start (20070s) is within the limit (174528.0s)
[2026-01-08 18:29:30] 2026-01-08 17:28:15,337 | INFO     | 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,337 | INFO     | job summary report
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | --------------------------------------------------
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | PanDA job id: 6962323442
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | task id: 47898826
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | errors: (none)
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | pilot state: finished 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | transexitcode: 0
[2026-01-08 18:29:30] 2026-01-08 17:28:15,338 | INFO     | exeerrorcode: 0
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | exeerrordiag: 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | exitcode: 0
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | exitmsg: OK
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | cpuconsumptiontime: 74035 s
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | nevents: 400
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | neventsw: 0
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | pid: 1715
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | pgrp: 1715
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | corecount: 8
[2026-01-08 18:29:30] 2026-01-08 17:28:15,339 | INFO     | event service: False
[2026-01-08 18:29:30] 2026-01-08 17:28:15,340 | INFO     | sizes: {0: 2283141, 1: 2283997, 12: 2283997, 23: 2284025, 33: 2284053, 44: 2284109, 55: 2284265, 66: 2284293, 76: 2284321, 87: 2284377, 98: 2284405, 104: 2284975, 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,340 | INFO     | --------------------------------------------------
[2026-01-08 18:29:30] 2026-01-08 17:28:15,340 | INFO     | 
[2026-01-08 18:29:30] 2026-01-08 17:28:15,340 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | job 6962323442 has completed (purged errors)
[2026-01-08 18:29:30] 2026-01-08 17:28:15,892 | INFO     | overall cleanup function is called
[2026-01-08 18:29:30] 2026-01-08 17:28:16,901 | INFO     | --- collectZombieJob: --- 10, [1715]
[2026-01-08 18:29:30] 2026-01-08 17:28:16,901 | INFO     | zombie collector waiting for pid 1715
[2026-01-08 18:29:30] 2026-01-08 17:28:16,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:29:30] 2026-01-08 17:28:16,902 | INFO     | collected zombie processes
[2026-01-08 18:29:30] 2026-01-08 17:28:16,902 | INFO     | will attempt to kill all subprocesses of pid=1715
[2026-01-08 18:29:30] 2026-01-08 17:28:16,983 | INFO     | process IDs to be killed: [1715] (in reverse order)
[2026-01-08 18:29:30] 2026-01-08 17:28:17,664 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:29:30] 2026-01-08 17:28:17,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:29:30] 2026-01-08 17:28:17,666 | INFO     | did not find any defunct processes belonging to 1715
[2026-01-08 18:29:30] 2026-01-08 17:28:17,668 | INFO     | did not find any defunct processes belonging to 1715
[2026-01-08 18:29:30] 2026-01-08 17:28:17,668 | INFO     | ready for new job
[2026-01-08 18:29:30] 2026-01-08 17:28:17,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:29:30] 2026-01-08 17:28:17,670 | INFO     | ***************************************
[2026-01-08 18:29:30] 2026-01-08 17:28:17,671 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:29:30] 2026-01-08 17:28:17,671 | INFO     | ***************************************
[2026-01-08 18:29:30] 2026-01-08 17:28:17,671 | INFO     | 
[2026-01-08 18:29:30] 2026-01-08 17:28:17,671 | INFO     | pilot is running in a VM
[2026-01-08 18:29:30] 2026-01-08 17:28:17,671 | INFO     | architecture information:
[2026-01-08 18:29:30] 2026-01-08 17:28:17,673 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:29:30] 2026-01-08 17:28:18,001 | INFO     | cat /etc/os-release:
[2026-01-08 18:29:30] NAME="CentOS Linux"
[2026-01-08 18:29:30] VERSION="7 (Core)"
[2026-01-08 18:29:30] ID="centos"
[2026-01-08 18:29:30] ID_LIKE="rhel fedora"
[2026-01-08 18:29:30] VERSION_ID="7"
[2026-01-08 18:29:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:29:30] ANSI_COLOR="0;31"
[2026-01-08 18:29:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:29:30] HOME_URL="https://www.centos.org/"
[2026-01-08 18:29:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:29:30] 
[2026-01-08 18:29:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:29:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:29:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:29:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:29:30] 
[2026-01-08 18:29:30] 2026-01-08 17:28:18,001 | INFO     | ***************************************
[2026-01-08 18:29:30] 2026-01-08 17:28:18,504 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-08 18:29:30] 2026-01-08 17:28:18,756 | INFO     | sufficient remaining disk space (495841181696 B)
[2026-01-08 18:29:30] 2026-01-08 17:28:18,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:29:30] 2026-01-08 17:28:18,756 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:29:30] 2026-01-08 17:28:18,756 | INFO     | update_server=False
[2026-01-08 18:29:30] 2026-01-08 17:28:18,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:29:30] 2026-01-08 17:28:18,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:29:30] 2026-01-08 17:28:19,151 | INFO     | all data control threads have been joined
[2026-01-08 18:29:30] 2026-01-08 17:28:19,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:29:30] 2026-01-08 17:28:19,444 | INFO     | aborting loop
[2026-01-08 18:29:30] 2026-01-08 17:28:19,762 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:19,966 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,000 | INFO     | all job control threads have been joined
[2026-01-08 18:29:30] 2026-01-08 17:28:20,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:29:30] 2026-01-08 17:28:20,059 | INFO     | all payload control threads have been joined
[2026-01-08 18:29:30] 2026-01-08 17:28:20,157 | INFO     | [data] control thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,230 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,301 | INFO     | [job] validate thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,450 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,635 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,764 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,773 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:20,970 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:21,006 | INFO     | [job] control thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:21,009 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:21,017 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:21,065 | INFO     | [payload] control thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:21,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:29:30] 2026-01-08 17:28:25,835 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:29:30] 2026-01-08 17:28:48,107 | INFO     | PID=27641 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:29:30] 2026-01-08 17:28:48,107 | INFO     | .. there are 2 such processes running
[2026-01-08 18:29:30] 2026-01-08 17:28:48,108 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:29:30] 2026-01-08 17:28:48,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:29:30] 2026-01-08 17:28:48,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:29:30] 2026-01-08 17:29:18,817 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:29:30] 2026-01-08 17:29:20,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920033093440)>', '<ExcThread(monitor, started 139919724881664)>']
[2026-01-08 18:29:30] 2026-01-08 17:29:21,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:29:30] 2026-01-08 17:29:21,305 | INFO     | [monitor] control thread has ended
[2026-01-08 18:29:30] 2026-01-08 17:29:25,860 | INFO     | all workflow threads have been joined
[2026-01-08 18:29:30] 2026-01-08 17:29:25,860 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:29:30] 2026-01-08 17:29:25,861 | INFO     | traces error code: 0
[2026-01-08 18:29:30] 2026-01-08 17:29:25,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:29:30] 2026-01-08 17:29:26,340 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:29:30] 2026-01-08 17:29:26,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:29:30] 2026-01-08 17:29:26,561 [wrapper] pilotpid: 27641
[2026-01-08 18:29:30] 2026-01-08 17:29:26,661 [wrapper] Pilot exit status: 0
[2026-01-08 18:29:30] 2026-01-08 17:29:27,059 [wrapper] pandaids: 6962323442
[2026-01-08 18:29:30] 2026-01-08 17:29:27,911 [wrapper] cleanup supervisor_pilot 31512 27642
[2026-01-08 18:29:30] 2026-01-08 17:29:27,966 [wrapper] Test setup, not cleaning
[2026-01-08 18:29:30] 2026-01-08 17:29:28,030 [wrapper] apfmon messages muted
[2026-01-08 18:29:30] 2026-01-08 17:29:28,080 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:29:30] 2026-01-08 17:29:28,183 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:29:30]  *** Error codes and diagnostics ***
[2026-01-08 18:29:30]     "exeErrorCode": 0,
[2026-01-08 18:29:30]     "exeErrorDiag": "",
[2026-01-08 18:29:30]     "pilotErrorCode": 0,
[2026-01-08 18:29:30]     "pilotErrorDiag": "",
[2026-01-08 18:29:30]  *** Listing of results directory ***
[2026-01-08 18:29:30] total 449872
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:29:30] -rwx------. 1 boinc boinc     36322 Jan  7 22:07 runpilot2-wrapper.sh
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc       100 Jan  8 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:29:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 12:48 run_atlas
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc       105 Jan  8 12:48 job.xml
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc      6389 Jan  8 12:48 init_data.xml
[2026-01-08 18:29:30] -rw-r--r--. 2 boinc boinc 226481239 Jan  8 12:48 EVNT.47898824._000747.pool.root.1
[2026-01-08 18:29:30] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:48 start_atlas.sh
[2026-01-08 18:29:30] drwxrwx--x. 2 boinc boinc        68 Jan  8 12:48 shared
[2026-01-08 18:29:30] -rw-r--r--. 2 boinc boinc    592402 Jan  8 12:48 input.tar.gz
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc         0 Jan  8 12:48 boinc_lockfile
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc      2519 Jan  8 12:49 pandaJob.out
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc    989835 Jan  8 12:53 agis_schedconf.cvmfs.json
[2026-01-08 18:29:30] drwx------. 5 boinc boinc      4096 Jan  8 12:53 pilot3
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc 223889775 Jan  8 18:24 HITS.47898826._016086.pool.root.1
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc       531 Jan  8 18:25 boinc_task_state.xml
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc      1015 Jan  8 18:26 memory_monitor_summary.json
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc   1516240 Jan  8 18:26 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc    539507 Jan  8 18:26 log.47898826._016086.job.log.tgz.1
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc      7780 Jan  8 18:28 heartbeat.json
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc        95 Jan  8 18:28 pilot_heartbeat.json
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:29 boinc_mmap_file
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc        28 Jan  8 18:29 wrapper_checkpoint.txt
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc      4884 Jan  8 18:29 pilotlog.txt
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc   2659825 Jan  8 18:29 log.47898826._016086.job.log.1
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc       357 Jan  8 18:29 output.list
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:29 runtime_log
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc   3215360 Jan  8 18:29 result.tar.gz
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc      8817 Jan  8 18:29 runtime_log.err
[2026-01-08 18:29:30] -rw-------. 1 boinc boinc       656 Jan  8 18:29 E52LDmVvpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtzdKDmriqGIn.diag
[2026-01-08 18:29:30] -rw-r--r--. 1 boinc boinc     20754 Jan  8 18:29 stderr.txt
[2026-01-08 18:29:31] HITS file was successfully produced:
[2026-01-08 18:29:31] -rw-------. 1 boinc boinc 223889775 Jan  8 18:24 shared/HITS.pool.root.1
[2026-01-08 18:29:31]  *** Contents of shared directory: ***
[2026-01-08 18:29:31] total 443556
[2026-01-08 18:29:31] -rw-r--r--. 2 boinc boinc 226481239 Jan  8 12:48 ATLAS.root_0
[2026-01-08 18:29:31] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:48 start_atlas.sh
[2026-01-08 18:29:31] -rw-r--r--. 2 boinc boinc    592402 Jan  8 12:48 input.tar.gz
[2026-01-08 18:29:31] -rw-------. 1 boinc boinc 223889775 Jan  8 18:24 HITS.pool.root.1
[2026-01-08 18:29:31] -rw-------. 1 boinc boinc   3215360 Jan  8 18:29 result.tar.gz
18:29:32 (23895): run_atlas exited; CPU time 74229.677931
18:29:32 (23895): called boinc_finish(0)

</stderr_txt>
]]>

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