Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:41 (1865137): wrapper (7.7.26015): starting
06:14:41 (1865137): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 06:14:41] Arguments: --nthreads 4
[2026-01-08 06:14:41] Threads: 4
[2026-01-08 06:14:41] Checking for CVMFS
[2026-01-08 06:14:41] No cvmfs_config command found, will try listing directly
[2026-01-08 06:14:41] CVMFS is ok
[2026-01-08 06:14:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 06:14:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 06:14:41] Further information can be found at the LHC@home message board.
[2026-01-08 06:14:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:14:41] Checking for apptainer binary...
[2026-01-08 06:14:41] which: no apptainer in ((null))
[2026-01-08 06:14:41] apptainer is not installed, using version from CVMFS
[2026-01-08 06:14:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:14:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-08 06:14:41] apptainer works
[2026-01-08 06:14:41] Set ATHENA_PROC_NUMBER=4
[2026-01-08 06:14:41] Set ATHENA_CORE_NUMBER=4
[2026-01-08 06:14:41] Starting ATLAS job with PandaID=6962322228
[2026-01-08 06:14:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:49:50]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:49:50] 2026-01-08 08:48:29,276 | INFO     | time since job start (12814s) is within the limit (174528.0s)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,282 | INFO     | time since job start (12816s) is within the limit (174528.0s)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,309 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 09:49:50] 2026-01-08 08:48:31,330 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2735.9565312500013
[2026-01-08 09:49:50] 2026-01-08 08:48:31,354 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962322228/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,355 | INFO     | extracted standard info from prmon json
[2026-01-08 09:49:50] 2026-01-08 08:48:31,355 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:49:50] 2026-01-08 08:48:31,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:49:50] 2026-01-08 08:48:31,355 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:49:50] 2026-01-08 08:48:31,355 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:49:50] 2026-01-08 08:48:31,359 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:49:50] 2026-01-08 08:48:31,360 | INFO     | sum of square deviations: 2871616632.5
[2026-01-08 09:49:50] 2026-01-08 08:48:31,361 | INFO     | sum of deviations: -33082973812.999992
[2026-01-08 09:49:50] 2026-01-08 08:48:31,361 | INFO     | mean x: 1767855704.5
[2026-01-08 09:49:50] 2026-01-08 08:48:31,361 | INFO     | mean y: 2363603.1714285715
[2026-01-08 09:49:50] 2026-01-08 08:48:31,361 | INFO     | intersect: 20369261926.30132
[2026-01-08 09:49:50] 2026-01-08 08:48:31,362 | INFO     | chi2: 2.172530744610622
[2026-01-08 09:49:50] 2026-01-08 08:48:31,362 | INFO     | sum of square deviations: 2671343110.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,363 | INFO     | sum of deviations: -19068694489.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | mean x: 1767855552.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | mean y: 2374083.6829268294
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | intersect: 12621755433.67748
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | chi2: 1.4036394492247095
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | current chi2=1.4036394492247095 (change=35.391503539974956 %)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,364 | INFO     | sum of square deviations: 2480604650.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,366 | INFO     | sum of deviations: -18214567456.499996
[2026-01-08 09:49:50] 2026-01-08 08:48:31,366 | INFO     | mean x: 1767855399.5
[2026-01-08 09:49:50] 2026-01-08 08:48:31,366 | INFO     | mean y: 2374766.925
[2026-01-08 09:49:50] 2026-01-08 08:48:31,366 | INFO     | intersect: 12983371729.714092
[2026-01-08 09:49:50] 2026-01-08 08:48:31,366 | INFO     | chi2: 1.4024661899760231
[2026-01-08 09:49:50] 2026-01-08 08:48:31,367 | INFO     | current chi2=1.4024661899760231 (change=0.08358693889192331 %)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,367 | INFO     | right removable region: 199
[2026-01-08 09:49:50] 2026-01-08 08:48:31,367 | INFO     | sum of square deviations: 2671343110.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,368 | INFO     | sum of deviations: -56689273776.99999
[2026-01-08 09:49:50] 2026-01-08 08:48:31,368 | INFO     | mean x: 1767855857.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,368 | INFO     | mean y: 2381304.5707317074
[2026-01-08 09:49:50] 2026-01-08 08:48:31,369 | INFO     | intersect: 37518514780.867584
[2026-01-08 09:49:50] 2026-01-08 08:48:31,369 | INFO     | chi2: 0.9045128309304662
[2026-01-08 09:49:50] 2026-01-08 08:48:31,369 | INFO     | current chi2=0.9045128309304662 (change=58.36593644650216 %)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,369 | INFO     | sum of square deviations: 2480604650.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | sum of deviations: -53100242427.5
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | mean x: 1767856009.5
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | mean y: 2378430.375
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | intersect: 37845402985.44174
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | chi2: 0.9046963592274914
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | current chi2=0.9046963592274914 (change=-0.0202902922710755 %)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,371 | INFO     | left removable region: 20
[2026-01-08 09:49:50] 2026-01-08 08:48:31,372 | INFO     | sum of square deviations: 1778377530.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | sum of deviations: -30143233143.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | mean x: 1767855979.0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | mean y: 2383820.312849162
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | intersect: 29967278247.562786
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | chi2: 0.10832892620337532
[2026-01-08 09:49:50] 2026-01-08 08:48:31,373 | INFO     | current memory leak: -16.95 B/s (using 179 data points, chi2=0.11)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | could have reported an average CPU frequency of 2683 MHz (11 samples)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | ..............................
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . Timing measurements:
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . get job = 0 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . initial setup = 1 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . payload setup = 9 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . stage-in = 0 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,374 | INFO     | . payload execution = 12772 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,375 | INFO     | . stage-out = 1 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,375 | INFO     | . log creation = 0 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,375 | INFO     | ..............................
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | 
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | job summary report
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | --------------------------------------------------
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | PanDA job id: 6962322228
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | task id: 47898826
[2026-01-08 09:49:50] 2026-01-08 08:48:31,705 | INFO     | errors: (none)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | pilot state: finished 
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | transexitcode: 0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | exeerrorcode: 0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | exeerrordiag: 
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | exitcode: 0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | exitmsg: OK
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | cpuconsumptiontime: 48997 s
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | nevents: 400
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | neventsw: 0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | pid: 1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | pgrp: 1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | corecount: 4
[2026-01-08 09:49:50] 2026-01-08 08:48:31,706 | INFO     | event service: False
[2026-01-08 09:49:50] 2026-01-08 08:48:31,707 | INFO     | sizes: {0: 2283810, 1: 2284009, 7: 2284271, 11: 2284299, 12785: 2314989, 12787: 2324011, 12789: 2324195, 12798: 2324389}
[2026-01-08 09:49:50] 2026-01-08 08:48:31,707 | INFO     | --------------------------------------------------
[2026-01-08 09:49:50] 2026-01-08 08:48:31,707 | INFO     | 
[2026-01-08 09:49:50] 2026-01-08 08:48:31,707 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-08 09:49:50] 2026-01-08 08:48:31,740 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,740 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,740 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,740 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | job 6962322228 has completed (purged errors)
[2026-01-08 09:49:50] 2026-01-08 08:48:31,742 | INFO     | overall cleanup function is called
[2026-01-08 09:49:50] 2026-01-08 08:48:32,751 | INFO     | --- collectZombieJob: --- 10, [1888461]
[2026-01-08 09:49:50] 2026-01-08 08:48:32,751 | INFO     | zombie collector waiting for pid 1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:32,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:49:50] 2026-01-08 08:48:32,751 | INFO     | collected zombie processes
[2026-01-08 09:49:50] 2026-01-08 08:48:32,751 | INFO     | will attempt to kill all subprocesses of pid=1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:33,468 | INFO     | process IDs to be killed: [1888461] (in reverse order)
[2026-01-08 09:49:50] 2026-01-08 08:48:33,713 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:49:50] 2026-01-08 08:48:33,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:49:50] 2026-01-08 08:48:33,745 | INFO     | did not find any defunct processes belonging to 1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:33,774 | INFO     | did not find any defunct processes belonging to 1888461
[2026-01-08 09:49:50] 2026-01-08 08:48:33,775 | INFO     | ready for new job
[2026-01-08 09:49:50] 2026-01-08 08:48:33,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:49:50] 2026-01-08 08:48:33,778 | INFO     | ***************************************
[2026-01-08 09:49:50] 2026-01-08 08:48:33,778 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:49:50] 2026-01-08 08:48:33,778 | INFO     | ***************************************
[2026-01-08 09:49:50] 2026-01-08 08:48:33,778 | INFO     | 
[2026-01-08 09:49:50] 2026-01-08 08:48:33,786 | INFO     | architecture information:
[2026-01-08 09:49:50] 2026-01-08 08:48:33,786 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:49:50] 2026-01-08 08:48:33,810 | INFO     | cat /etc/os-release:
[2026-01-08 09:49:50] NAME="CentOS Linux"
[2026-01-08 09:49:50] VERSION="7 (Core)"
[2026-01-08 09:49:50] ID="centos"
[2026-01-08 09:49:50] ID_LIKE="rhel fedora"
[2026-01-08 09:49:50] VERSION_ID="7"
[2026-01-08 09:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:49:50] ANSI_COLOR="0;31"
[2026-01-08 09:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:49:50] HOME_URL="https://www.centos.org/"
[2026-01-08 09:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:49:50] 
[2026-01-08 09:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:49:50] 
[2026-01-08 09:49:50] 2026-01-08 08:48:33,811 | INFO     | ***************************************
[2026-01-08 09:49:50] 2026-01-08 08:48:34,314 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-08 09:49:50] 2026-01-08 08:48:34,337 | INFO     | sufficient remaining disk space (3334511525888 B)
[2026-01-08 09:49:50] 2026-01-08 08:48:34,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:49:50] 2026-01-08 08:48:34,338 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:49:50] 2026-01-08 08:48:34,338 | INFO     | update_server=False
[2026-01-08 09:49:50] 2026-01-08 08:48:34,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:49:50] 2026-01-08 08:48:34,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:49:50] 2026-01-08 08:48:35,126 | INFO     | all data control threads have been joined
[2026-01-08 09:49:50] 2026-01-08 08:48:35,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:49:50] 2026-01-08 08:48:35,177 | INFO     | aborting loop
[2026-01-08 09:49:50] 2026-01-08 08:48:35,343 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:35,427 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:35,483 | INFO     | all payload control threads have been joined
[2026-01-08 09:49:50] 2026-01-08 08:48:35,637 | INFO     | all job control threads have been joined
[2026-01-08 09:49:50] 2026-01-08 08:48:35,793 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:35,818 | INFO     | [job] validate thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,132 | INFO     | [data] control thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,161 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,179 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,274 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,283 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,344 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:49:50] 2026-01-08 08:48:36,489 | INFO     | [payload] control thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,527 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:36,643 | INFO     | [job] control thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:37,487 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:48:37,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:49:50] 2026-01-08 08:48:41,688 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:49:50] 2026-01-08 08:49:05,332 | INFO     | PID=1872600 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-08 09:49:50] 2026-01-08 08:49:05,333 | INFO     | .. there are 5 such processes running
[2026-01-08 09:49:50] 2026-01-08 08:49:05,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:49:50] 2026-01-08 08:49:05,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:49:50] 2026-01-08 08:49:05,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:49:50] 2026-01-08 08:49:14,641 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:49:50] 2026-01-08 08:49:14,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23038809085760)>', '<ExcThread(monitor, started 23038569445120)>']
[2026-01-08 09:49:50] 2026-01-08 08:49:15,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:49:50] 2026-01-08 08:49:15,367 | INFO     | [monitor] control thread has ended
[2026-01-08 09:49:50] 2026-01-08 08:49:19,896 | INFO     | all workflow threads have been joined
[2026-01-08 09:49:50] 2026-01-08 08:49:19,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:49:50] 2026-01-08 08:49:19,897 | INFO     | traces error code: 0
[2026-01-08 09:49:50] 2026-01-08 08:49:19,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:49:50] 2026-01-08 08:49:20,068 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:49:50] 2026-01-08 08:49:20,072 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:49:50] 2026-01-08 08:49:20,076 [wrapper] pilotpid: 1872600
[2026-01-08 09:49:50] 2026-01-08 08:49:20,080 [wrapper] Pilot exit status: 0
[2026-01-08 09:49:50] 2026-01-08 08:49:20,094 [wrapper] pandaids: 6962322228
[2026-01-08 09:49:50] 2026-01-08 08:49:20,262 [wrapper] cleanup supervisor_pilot 2149347 1872601
[2026-01-08 09:49:50] 2026-01-08 08:49:20,266 [wrapper] Test setup, not cleaning
[2026-01-08 09:49:50] 2026-01-08 08:49:20,270 [wrapper] apfmon messages muted
[2026-01-08 09:49:50] 2026-01-08 08:49:20,273 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:49:50] 2026-01-08 08:49:20,276 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:49:50]  *** Error codes and diagnostics ***
[2026-01-08 09:49:50]     "exeErrorCode": 0,
[2026-01-08 09:49:50]     "exeErrorDiag": "",
[2026-01-08 09:49:50]     "pilotErrorCode": 0,
[2026-01-08 09:49:50]     "pilotErrorDiag": "",
[2026-01-08 09:49:50]  *** Listing of results directory ***
[2026-01-08 09:49:50] total 440868
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 09:49:50] -rwx------ 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc       100 Jan  8 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:49:50] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 06:14 run_atlas
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc       105 Jan  8 06:14 job.xml
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc      6691 Jan  8 06:14 init_data.xml
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc 223500972 Jan  8 06:14 EVNT.47898824._000710.pool.root.1
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:14 start_atlas.sh
[2026-01-08 09:49:50] drwxrwx--x 2 boinc boinc      4096 Jan  8 06:14 shared
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc    592406 Jan  8 06:14 input.tar.gz
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc         0 Jan  8 06:14 boinc_lockfile
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc      2519 Jan  8 06:14 pandaJob.out
[2026-01-08 09:49:50] -rw------- 1 boinc boinc    989827 Jan  8 06:14 agis_schedconf.cvmfs.json
[2026-01-08 09:49:50] drwx------ 5 boinc boinc      4096 Jan  8 06:14 pilot3
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc       528 Jan  8 09:47 boinc_task_state.xml
[2026-01-08 09:49:50] -rw------- 1 boinc boinc 219688979 Jan  8 09:47 HITS.47898826._015160.pool.root.1
[2026-01-08 09:49:50] -rw------- 1 boinc boinc      1034 Jan  8 09:48 memory_monitor_summary.json
[2026-01-08 09:49:50] -rw------- 1 boinc boinc   1516240 Jan  8 09:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:49:50] -rw------- 1 boinc boinc    392736 Jan  8 09:48 log.47898826._015160.job.log.tgz.1
[2026-01-08 09:49:50] -rw------- 1 boinc boinc      7797 Jan  8 09:48 heartbeat.json
[2026-01-08 09:49:50] -rw------- 1 boinc boinc        95 Jan  8 09:49 pilot_heartbeat.json
[2026-01-08 09:49:50] -rw------- 1 boinc boinc      4836 Jan  8 09:49 pilotlog.txt
[2026-01-08 09:49:50] -rw------- 1 boinc boinc   1781295 Jan  8 09:49 log.47898826._015160.job.log.1
[2026-01-08 09:49:50] -rw------- 1 boinc boinc       357 Jan  8 09:49 output.list
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc       620 Jan  8 09:49 runtime_log
[2026-01-08 09:49:50] -rw------- 1 boinc boinc   2191360 Jan  8 09:49 result.tar.gz
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc      9223 Jan  8 09:49 runtime_log.err
[2026-01-08 09:49:50] -rw------- 1 boinc boinc       666 Jan  8 09:49 97ZNDm8upx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM5iKDmspt84n.diag
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc        26 Jan  8 09:49 wrapper_checkpoint.txt
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc      8192 Jan  8 09:49 boinc_mmap_file
[2026-01-08 09:49:50] -rw-r--r-- 1 boinc boinc     20888 Jan  8 09:49 stderr.txt
[2026-01-08 09:49:50] HITS file was successfully produced:
[2026-01-08 09:49:50] -rw------- 1 boinc boinc 219688979 Jan  8 09:47 shared/HITS.pool.root.1
[2026-01-08 09:49:50]  *** Contents of shared directory: ***
[2026-01-08 09:49:50] total 435552
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc 223500972 Jan  8 06:14 ATLAS.root_0
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:14 start_atlas.sh
[2026-01-08 09:49:50] -rw-r--r-- 2 boinc boinc    592406 Jan  8 06:14 input.tar.gz
[2026-01-08 09:49:50] -rw------- 1 boinc boinc 219688979 Jan  8 09:47 HITS.pool.root.1
[2026-01-08 09:49:50] -rw------- 1 boinc boinc   2191360 Jan  8 09:49 result.tar.gz
09:49:51 (1865137): run_atlas exited; CPU time 49881.226072
09:49:51 (1865137): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN