Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:57:42 (3168019): wrapper (7.7.26015): starting
21:57:42 (3168019): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 21:57:42] Arguments: --nthreads 4
[2026-01-08 21:57:42] Threads: 4
[2026-01-08 21:57:42] Checking for CVMFS
[2026-01-08 21:57:42] No cvmfs_config command found, will try listing directly
[2026-01-08 21:57:42] CVMFS is ok
[2026-01-08 21:57:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 21:57:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 21:57:42] Further information can be found at the LHC@home message board.
[2026-01-08 21:57:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:57:42] Checking for apptainer binary...
[2026-01-08 21:57:42] which: no apptainer in ((null))
[2026-01-08 21:57:42] apptainer is not installed, using version from CVMFS
[2026-01-08 21:57:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:57:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-08 21:57:42] apptainer works
[2026-01-08 21:57:42] Set ATHENA_PROC_NUMBER=4
[2026-01-08 21:57:42] Set ATHENA_CORE_NUMBER=4
[2026-01-08 21:57:42] Starting ATLAS job with PandaID=6962322799
[2026-01-08 21:57:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:10:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:10:41] 2026-01-09 01:09:43,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:10:41] 2026-01-09 01:09:44,150 | INFO     | time since job start (15107s) is within the limit (174528.0s)
[2026-01-09 02:10:41] 2026-01-09 01:09:45,986 | INFO     | monitor loop #1021: job 0:6962322799 is in state 'finished'
[2026-01-09 02:10:41] 2026-01-09 01:09:45,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:10:41] 2026-01-09 01:09:46,155 | INFO     | time since job start (15109s) is within the limit (174528.0s)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,160 | INFO     | time since job start (15111s) is within the limit (174528.0s)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,489 | INFO     | monitor loop #1022: job 0:6962322799 is in state 'finished'
[2026-01-09 02:10:41] 2026-01-09 01:09:48,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,568 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:10:41] 2026-01-09 01:09:48,590 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2701.4169921875005
[2026-01-09 02:10:41] 2026-01-09 01:09:48,615 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962322799/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,616 | INFO     | extracted standard info from prmon json
[2026-01-09 02:10:41] 2026-01-09 01:09:48,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:10:41] 2026-01-09 01:09:48,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:10:41] 2026-01-09 01:09:48,616 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:10:41] 2026-01-09 01:09:48,616 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:10:41] 2026-01-09 01:09:48,621 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:10:41] 2026-01-09 01:09:48,622 | INFO     | sum of square deviations: 4672638308.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,623 | INFO     | sum of deviations: 22893470922.000004
[2026-01-09 02:10:41] 2026-01-09 01:09:48,623 | INFO     | mean x: 1767913417.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,624 | INFO     | mean y: 2330595.71659919
[2026-01-09 02:10:41] 2026-01-09 01:09:48,624 | INFO     | intersect: -8659515611.25568
[2026-01-09 02:10:41] 2026-01-09 01:09:48,624 | INFO     | chi2: 1.2987585242576032
[2026-01-09 02:10:41] 2026-01-09 01:09:48,624 | INFO     | sum of square deviations: 4394577280.5
[2026-01-09 02:10:41] 2026-01-09 01:09:48,626 | INFO     | sum of deviations: 22389878041.000008
[2026-01-09 02:10:41] 2026-01-09 01:09:48,626 | INFO     | mean x: 1767913264.5
[2026-01-09 02:10:41] 2026-01-09 01:09:48,626 | INFO     | mean y: 2330319.487603306
[2026-01-09 02:10:41] 2026-01-09 01:09:48,627 | INFO     | intersect: -9004989350.339098
[2026-01-09 02:10:41] 2026-01-09 01:09:48,627 | INFO     | chi2: 1.2992960051183442
[2026-01-09 02:10:41] 2026-01-09 01:09:48,627 | INFO     | current chi2=1.2992960051183442 (change=-0.04138420273685966 %)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,627 | INFO     | right removable region: 241
[2026-01-09 02:10:41] 2026-01-09 01:09:48,628 | INFO     | sum of square deviations: 4394577280.5
[2026-01-09 02:10:41] 2026-01-09 01:09:48,629 | INFO     | sum of deviations: -5432867827.000005
[2026-01-09 02:10:41] 2026-01-09 01:09:48,629 | INFO     | mean x: 1767913569.5
[2026-01-09 02:10:41] 2026-01-09 01:09:48,630 | INFO     | mean y: 2345942.619834711
[2026-01-09 02:10:41] 2026-01-09 01:09:48,630 | INFO     | intersect: 2187957922.9285483
[2026-01-09 02:10:41] 2026-01-09 01:09:48,630 | INFO     | chi2: 0.04639520463632851
[2026-01-09 02:10:41] 2026-01-09 01:09:48,630 | INFO     | current chi2=0.04639520463632851 (change=96.42772665050657 %)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,630 | INFO     | sum of square deviations: 4127772278.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,632 | INFO     | sum of deviations: -2521724750.0000005
[2026-01-09 02:10:41] 2026-01-09 01:09:48,632 | INFO     | mean x: 1767913722.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,632 | INFO     | mean y: 2344264.164556962
[2026-01-09 02:10:41] 2026-01-09 01:09:48,633 | INFO     | intersect: 1082392166.1268513
[2026-01-09 02:10:41] 2026-01-09 01:09:48,633 | INFO     | chi2: 0.038005939693675495
[2026-01-09 02:10:41] 2026-01-09 01:09:48,633 | INFO     | current chi2=0.038005939693675495 (change=18.082181140082806 %)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,633 | INFO     | left removable region: 20
[2026-01-09 02:10:41] 2026-01-09 01:09:48,634 | INFO     | sum of square deviations: 3346927870.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,635 | INFO     | sum of deviations: 5028524020.000001
[2026-01-09 02:10:41] 2026-01-09 01:09:48,635 | INFO     | mean x: 1767913844.0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,635 | INFO     | mean y: 2339506.411764706
[2026-01-09 02:10:41] 2026-01-09 01:09:48,635 | INFO     | intersect: -2653826857.2345886
[2026-01-09 02:10:41] 2026-01-09 01:09:48,636 | INFO     | chi2: 0.0005548378600790518
[2026-01-09 02:10:41] 2026-01-09 01:09:48,636 | INFO     | current memory leak: 1.50 B/s (using 221 data points, chi2=0.00)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,636 | INFO     | could have reported an average CPU frequency of 2641 MHz (12 samples)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | ..............................
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . Timing measurements:
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . get job = 0 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . initial setup = 1 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . payload setup = 9 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . stage-in = 0 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . payload execution = 15064 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . stage-out = 1 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,637 | INFO     | . log creation = 0 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,638 | INFO     | ..............................
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | 
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | job summary report
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | --------------------------------------------------
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | PanDA job id: 6962322799
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | task id: 47898826
[2026-01-09 02:10:41] 2026-01-09 01:09:48,734 | INFO     | errors: (none)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | pilot state: finished 
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | transexitcode: 0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | exeerrorcode: 0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | exeerrordiag: 
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | exitcode: 0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | exitmsg: OK
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | cpuconsumptiontime: 57671 s
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | nevents: 400
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | neventsw: 0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | pid: 3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | pgrp: 3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | corecount: 4
[2026-01-09 02:10:41] 2026-01-09 01:09:48,735 | INFO     | event service: False
[2026-01-09 02:10:41] 2026-01-09 01:09:48,736 | INFO     | sizes: {0: 2283810, 1: 2284009, 8: 2284271, 12: 2284299, 15078: 2316053, 15080: 2325075, 15083: 2325259, 15092: 2325453}
[2026-01-09 02:10:41] 2026-01-09 01:09:48,736 | INFO     | --------------------------------------------------
[2026-01-09 02:10:41] 2026-01-09 01:09:48,736 | INFO     | 
[2026-01-09 02:10:41] 2026-01-09 01:09:48,736 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-09 02:10:41] 2026-01-09 01:09:48,767 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:10:41] 2026-01-09 01:09:48,770 | INFO     | job 6962322799 has completed (purged errors)
[2026-01-09 02:10:41] 2026-01-09 01:09:48,770 | INFO     | overall cleanup function is called
[2026-01-09 02:10:41] 2026-01-09 01:09:49,779 | INFO     | --- collectZombieJob: --- 10, [3191342]
[2026-01-09 02:10:41] 2026-01-09 01:09:49,779 | INFO     | zombie collector waiting for pid 3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:49,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:10:41] 2026-01-09 01:09:49,779 | INFO     | collected zombie processes
[2026-01-09 02:10:41] 2026-01-09 01:09:49,779 | INFO     | will attempt to kill all subprocesses of pid=3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:50,567 | INFO     | process IDs to be killed: [3191342] (in reverse order)
[2026-01-09 02:10:41] 2026-01-09 01:09:50,825 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:10:41] 2026-01-09 01:09:50,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:10:41] 2026-01-09 01:09:50,860 | INFO     | did not find any defunct processes belonging to 3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:50,894 | INFO     | did not find any defunct processes belonging to 3191342
[2026-01-09 02:10:41] 2026-01-09 01:09:50,894 | INFO     | ready for new job
[2026-01-09 02:10:41] 2026-01-09 01:09:50,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:10:41] 2026-01-09 01:09:50,898 | INFO     | ***************************************
[2026-01-09 02:10:41] 2026-01-09 01:09:50,899 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:10:41] 2026-01-09 01:09:50,899 | INFO     | ***************************************
[2026-01-09 02:10:41] 2026-01-09 01:09:50,899 | INFO     | 
[2026-01-09 02:10:41] 2026-01-09 01:09:50,908 | INFO     | architecture information:
[2026-01-09 02:10:41] 2026-01-09 01:09:50,908 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:10:41] 2026-01-09 01:09:50,932 | INFO     | cat /etc/os-release:
[2026-01-09 02:10:41] NAME="CentOS Linux"
[2026-01-09 02:10:41] VERSION="7 (Core)"
[2026-01-09 02:10:41] ID="centos"
[2026-01-09 02:10:41] ID_LIKE="rhel fedora"
[2026-01-09 02:10:41] VERSION_ID="7"
[2026-01-09 02:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:10:41] ANSI_COLOR="0;31"
[2026-01-09 02:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:10:41] HOME_URL="https://www.centos.org/"
[2026-01-09 02:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:10:41] 
[2026-01-09 02:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:10:41] 
[2026-01-09 02:10:41] 2026-01-09 01:09:50,932 | INFO     | ***************************************
[2026-01-09 02:10:41] 2026-01-09 01:09:51,435 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-09 02:10:41] 2026-01-09 01:09:51,461 | INFO     | sufficient remaining disk space (3333451415552 B)
[2026-01-09 02:10:41] 2026-01-09 01:09:51,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:10:41] 2026-01-09 01:09:51,462 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:10:41] 2026-01-09 01:09:51,462 | INFO     | update_server=False
[2026-01-09 02:10:41] 2026-01-09 01:09:51,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:10:41] 2026-01-09 01:09:51,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:10:41] 2026-01-09 01:09:51,997 | INFO     | aborting loop
[2026-01-09 02:10:41] 2026-01-09 01:09:52,203 | INFO     | all data control threads have been joined
[2026-01-09 02:10:41] 2026-01-09 01:09:52,467 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:52,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:10:41] 2026-01-09 01:09:52,587 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:52,733 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:52,884 | INFO     | all job control threads have been joined
[2026-01-09 02:10:41] 2026-01-09 01:09:52,907 | INFO     | all payload control threads have been joined
[2026-01-09 02:10:41] 2026-01-09 01:09:52,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,002 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,208 | INFO     | [data] control thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,244 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,293 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,426 | INFO     | [job] validate thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:10:41] 2026-01-09 01:09:53,890 | INFO     | [job] control thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,902 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:53,912 | INFO     | [payload] control thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:54,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:10:41] 2026-01-09 01:09:54,520 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:54,750 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:09:58,496 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:10:01,535 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:10:41] 2026-01-09 01:10:02,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:10:41] 2026-01-09 01:10:22,200 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:10:41] 2026-01-09 01:10:22,309 | INFO     | PID=3175836 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 02:10:41] 2026-01-09 01:10:22,309 | INFO     | .. there are 6 such processes running
[2026-01-09 02:10:41] 2026-01-09 01:10:22,310 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:10:41] 2026-01-09 01:10:22,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:10:41] 2026-01-09 01:10:22,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:10:41] 2026-01-09 01:10:22,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22707905398592)>', '<ExcThread(monitor, started 22707666122496)>']
[2026-01-09 02:10:41] 2026-01-09 01:10:23,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:10:41] 2026-01-09 01:10:23,316 | INFO     | [monitor] control thread has ended
[2026-01-09 02:10:41] 2026-01-09 01:10:27,366 | INFO     | all workflow threads have been joined
[2026-01-09 02:10:41] 2026-01-09 01:10:27,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:10:41] 2026-01-09 01:10:27,367 | INFO     | traces error code: 0
[2026-01-09 02:10:41] 2026-01-09 01:10:27,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:10:41] 2026-01-09 01:10:27,558 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:10:41] 2026-01-09 01:10:27,562 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:10:41] 2026-01-09 01:10:27,567 [wrapper] pilotpid: 3175836
[2026-01-09 02:10:41] 2026-01-09 01:10:27,571 [wrapper] Pilot exit status: 0
[2026-01-09 02:10:41] 2026-01-09 01:10:27,588 [wrapper] pandaids: 6962322799
[2026-01-09 02:10:41] 2026-01-09 01:10:27,780 [wrapper] cleanup supervisor_pilot 3531316 3175838
[2026-01-09 02:10:41] 2026-01-09 01:10:27,784 [wrapper] Test setup, not cleaning
[2026-01-09 02:10:41] 2026-01-09 01:10:27,789 [wrapper] apfmon messages muted
[2026-01-09 02:10:41] 2026-01-09 01:10:27,793 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:10:41] 2026-01-09 01:10:27,796 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:10:41]  *** Error codes and diagnostics ***
[2026-01-09 02:10:41]     "exeErrorCode": 0,
[2026-01-09 02:10:41]     "exeErrorDiag": "",
[2026-01-09 02:10:41]     "pilotErrorCode": 0,
[2026-01-09 02:10:41]     "pilotErrorDiag": "",
[2026-01-09 02:10:41]  *** Listing of results directory ***
[2026-01-09 02:10:41] total 448892
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 02:10:41] -rwx------ 1 boinc boinc     36322 Jan  7 22:07 runpilot2-wrapper.sh
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc       100 Jan  8 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:10:41] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 21:57 run_atlas
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc       105 Jan  8 21:57 job.xml
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc 223804175 Jan  8 21:57 EVNT.47898824._000729.pool.root.1
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc      6691 Jan  8 21:57 init_data.xml
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 21:57 start_atlas.sh
[2026-01-09 02:10:41] drwxrwx--x 2 boinc boinc      4096 Jan  8 21:57 shared
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc    592405 Jan  8 21:57 input.tar.gz
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 21:57 boinc_lockfile
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc      2519 Jan  8 21:57 pandaJob.out
[2026-01-09 02:10:41] -rw------- 1 boinc boinc    989845 Jan  8 21:57 agis_schedconf.cvmfs.json
[2026-01-09 02:10:41] drwx------ 5 boinc boinc      4096 Jan  8 21:57 pilot3
[2026-01-09 02:10:41] -rw------- 1 boinc boinc 226948944 Jan  9 02:08 HITS.47898826._015634.pool.root.1
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc       529 Jan  9 02:09 boinc_task_state.xml
[2026-01-09 02:10:41] -rw------- 1 boinc boinc      1030 Jan  9 02:09 memory_monitor_summary.json
[2026-01-09 02:10:41] -rw------- 1 boinc boinc   1516240 Jan  9 02:09 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:10:41] -rw------- 1 boinc boinc    420679 Jan  9 02:09 log.47898826._015634.job.log.tgz.1
[2026-01-09 02:10:41] -rw------- 1 boinc boinc      7786 Jan  9 02:09 heartbeat.json
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc        26 Jan  9 02:10 wrapper_checkpoint.txt
[2026-01-09 02:10:41] -rw------- 1 boinc boinc        95 Jan  9 02:10 pilot_heartbeat.json
[2026-01-09 02:10:41] -rw------- 1 boinc boinc      4907 Jan  9 02:10 pilotlog.txt
[2026-01-09 02:10:41] -rw------- 1 boinc boinc   2079360 Jan  9 02:10 log.47898826._015634.job.log.1
[2026-01-09 02:10:41] -rw------- 1 boinc boinc       357 Jan  9 02:10 output.list
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc       620 Jan  9 02:10 runtime_log
[2026-01-09 02:10:41] -rw------- 1 boinc boinc   2519040 Jan  9 02:10 result.tar.gz
[2026-01-09 02:10:41] -rw------- 1 boinc boinc       666 Jan  9 02:10 RUONDmJvpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0ydKDmr8YXEn.diag
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc      9223 Jan  9 02:10 runtime_log.err
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc      8192 Jan  9 02:10 boinc_mmap_file
[2026-01-09 02:10:41] -rw-r--r-- 1 boinc boinc     21132 Jan  9 02:10 stderr.txt
[2026-01-09 02:10:41] HITS file was successfully produced:
[2026-01-09 02:10:41] -rw------- 1 boinc boinc 226948944 Jan  9 02:08 shared/HITS.pool.root.1
[2026-01-09 02:10:41]  *** Contents of shared directory: ***
[2026-01-09 02:10:41] total 443256
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc 223804175 Jan  8 21:57 ATLAS.root_0
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 21:57 start_atlas.sh
[2026-01-09 02:10:41] -rw-r--r-- 2 boinc boinc    592405 Jan  8 21:57 input.tar.gz
[2026-01-09 02:10:41] -rw------- 1 boinc boinc 226948944 Jan  9 02:08 HITS.pool.root.1
[2026-01-09 02:10:41] -rw------- 1 boinc boinc   2519040 Jan  9 02:10 result.tar.gz
02:10:42 (3168019): run_atlas exited; CPU time 58811.750891
02:10:42 (3168019): called boinc_finish(0)

</stderr_txt>
]]>

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