Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:18:25 (10467): wrapper (7.7.26015): starting
01:18:25 (10467): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 01:18:25] Arguments: --nthreads 8
[2026-01-08 01:18:25] Threads: 8
[2026-01-08 01:18:25] Checking for CVMFS
[2026-01-08 01:18:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 01:18:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 01:18:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 01:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 01:18:31] 2.11.2.0 11184 33244 96560 154884 0 11 20004085 25165825 96 130560 0 14359082 99.819 10281154 3273 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 01:18:31] CVMFS is ok
[2026-01-08 01:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 01:18:31] Checking for apptainer binary...
[2026-01-08 01:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 01:18:31] Running /usr/bin/apptainer --version
[2026-01-08 01:18:31] apptainer version 1.3.2-1.el7
[2026-01-08 01:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 01:18:47] cg-vwn432.simple-grid.lan
[2026-01-08 01:18:47] apptainer works
[2026-01-08 01:18:47] Set ATHENA_PROC_NUMBER=8
[2026-01-08 01:18:47] Set ATHENA_CORE_NUMBER=8
[2026-01-08 01:18:47] Starting ATLAS job with PandaID=6962322135
[2026-01-08 01:18:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:27:04]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:27:04] 2026-01-08 06:26:02,344 | INFO     | time since job start (21766s) is within the limit (174528.0s)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,124 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:27:04] 2026-01-08 06:26:03,125 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 07:27:04] 2026-01-08 06:26:03,127 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6962322135/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,127 | INFO     | extracted standard info from prmon json
[2026-01-08 07:27:04] 2026-01-08 06:26:03,128 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:27:04] 2026-01-08 06:26:03,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:27:04] 2026-01-08 06:26:03,128 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:27:04] 2026-01-08 06:26:03,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:27:04] 2026-01-08 06:26:03,136 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:27:04] 2026-01-08 06:26:03,136 | INFO     | sum of square deviations: 12844082682.5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,141 | INFO     | sum of deviations: 160600594003.00003
[2026-01-08 07:27:04] 2026-01-08 06:26:03,141 | INFO     | mean x: 1767842865.5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,141 | INFO     | mean y: 2446724.710982659
[2026-01-08 07:27:04] 2026-01-08 06:26:03,141 | INFO     | intersect: -22102410533.028465
[2026-01-08 07:27:04] 2026-01-08 06:26:03,142 | INFO     | chi2: 9.556671883239217
[2026-01-08 07:27:04] 2026-01-08 06:26:03,143 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,165 | INFO     | sum of deviations: 181015917476.99994
[2026-01-08 07:27:04] 2026-01-08 06:26:03,165 | INFO     | mean x: 1767842713.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,165 | INFO     | mean y: 2452322.671554252
[2026-01-08 07:27:04] 2026-01-08 06:26:03,166 | INFO     | intersect: -26024454812.727016
[2026-01-08 07:27:04] 2026-01-08 06:26:03,166 | INFO     | chi2: 8.850052629486834
[2026-01-08 07:27:04] 2026-01-08 06:26:03,166 | INFO     | current chi2=8.850052629486834 (change=7.393988852873279 %)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,166 | INFO     | right removable region: 340
[2026-01-08 07:27:04] 2026-01-08 06:26:03,167 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,171 | INFO     | sum of deviations: 36622194910.99996
[2026-01-08 07:27:04] 2026-01-08 06:26:03,171 | INFO     | mean x: 1767843018.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,171 | INFO     | mean y: 2481163.961876833
[2026-01-08 07:27:04] 2026-01-08 06:26:03,172 | INFO     | intersect: -5263147647.991135
[2026-01-08 07:27:04] 2026-01-08 06:26:03,172 | INFO     | chi2: 4.353180946597097
[2026-01-08 07:27:04] 2026-01-08 06:26:03,172 | INFO     | current chi2=4.353180946597097 (change=54.4487767312401 %)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,173 | INFO     | sum of square deviations: 11762304260.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,177 | INFO     | sum of deviations: -60809987744.999985
[2026-01-08 07:27:04] 2026-01-08 06:26:03,177 | INFO     | mean x: 1767843170.5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,177 | INFO     | mean y: 2509030.148809524
[2026-01-08 07:27:04] 2026-01-08 06:26:03,177 | INFO     | intersect: 9142089095.151049
[2026-01-08 07:27:04] 2026-01-08 06:26:03,178 | INFO     | chi2: 1.3244809470081782
[2026-01-08 07:27:04] 2026-01-08 06:26:03,178 | INFO     | current chi2=1.3244809470081782 (change=69.57441091339125 %)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,178 | INFO     | sum of square deviations: 11244973630.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,182 | INFO     | sum of deviations: -84151382094.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,182 | INFO     | mean x: 1767843323.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,183 | INFO     | mean y: 2515863.4743202417
[2026-01-08 07:27:04] 2026-01-08 06:26:03,183 | INFO     | intersect: 13232111934.665787
[2026-01-08 07:27:04] 2026-01-08 06:26:03,183 | INFO     | chi2: 0.9965525202995988
[2026-01-08 07:27:04] 2026-01-08 06:26:03,183 | INFO     | current chi2=0.9965525202995988 (change=24.759014272672246 %)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,184 | INFO     | left removable region: 30
[2026-01-08 07:27:04] 2026-01-08 06:26:03,184 | INFO     | sum of square deviations: 9237596457.5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,187 | INFO     | sum of deviations: -32937489301.0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,188 | INFO     | mean x: 1767843597.5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,188 | INFO     | mean y: 2513676.251612903
[2026-01-08 07:27:04] 2026-01-08 06:26:03,188 | INFO     | intersect: 6305920611.853573
[2026-01-08 07:27:04] 2026-01-08 06:26:03,189 | INFO     | chi2: 0.16100758988053895
[2026-01-08 07:27:04] 2026-01-08 06:26:03,189 | INFO     | current memory leak: -3.57 B/s (using 310 data points, chi2=0.16)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | ..............................
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | . Timing measurements:
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | . get job = 0 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | . initial setup = 12 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | . payload setup = 151 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,190 | INFO     | . stage-in = 0 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,191 | INFO     | . payload execution = 21274 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,191 | INFO     | . stage-out = 5 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,191 | INFO     | . log creation = 1 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,191 | INFO     | ..............................
[2026-01-08 07:27:04] 2026-01-08 06:26:03,361 | INFO     | 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | job summary report
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | --------------------------------------------------
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | PanDA job id: 6962322135
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | task id: 47898826
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | errors: (none)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | pilot state: finished 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,362 | INFO     | transexitcode: 0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | exeerrorcode: 0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | exeerrordiag: 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | exitcode: 0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | exitmsg: OK
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | cpuconsumptiontime: 79699 s
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | nevents: 400
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | neventsw: 0
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | pid: 20981
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | pgrp: 20981
[2026-01-08 07:27:04] 2026-01-08 06:26:03,363 | INFO     | corecount: 8
[2026-01-08 07:27:04] 2026-01-08 06:26:03,364 | INFO     | event service: False
[2026-01-08 07:27:04] 2026-01-08 06:26:03,364 | INFO     | sizes: {0: 2283740, 1: 2283995, 12: 2283995, 23: 2284023, 34: 2284051, 44: 2284079, 55: 2284235, 66: 2284263, 77: 2284291, 87: 2284347, 98: 2284375, 109: 2285001, 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,364 | INFO     | --------------------------------------------------
[2026-01-08 07:27:04] 2026-01-08 06:26:03,364 | INFO     | 
[2026-01-08 07:27:04] 2026-01-08 06:26:03,364 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-08 07:27:04] 2026-01-08 06:26:03,947 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,947 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,947 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,947 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,949 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:27:04] 2026-01-08 06:26:03,950 | INFO     | job 6962322135 has completed (purged errors)
[2026-01-08 07:27:04] 2026-01-08 06:26:03,950 | INFO     | overall cleanup function is called
[2026-01-08 07:27:04] 2026-01-08 06:26:04,958 | INFO     | --- collectZombieJob: --- 10, [20981]
[2026-01-08 07:27:04] 2026-01-08 06:26:04,959 | INFO     | zombie collector waiting for pid 20981
[2026-01-08 07:27:04] 2026-01-08 06:26:04,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:27:04] 2026-01-08 06:26:04,959 | INFO     | collected zombie processes
[2026-01-08 07:27:04] 2026-01-08 06:26:04,959 | INFO     | will attempt to kill all subprocesses of pid=20981
[2026-01-08 07:27:04] 2026-01-08 06:26:05,056 | INFO     | process IDs to be killed: [20981] (in reverse order)
[2026-01-08 07:27:04] 2026-01-08 06:26:05,888 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:27:04] 2026-01-08 06:26:05,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:27:04] 2026-01-08 06:26:05,890 | INFO     | did not find any defunct processes belonging to 20981
[2026-01-08 07:27:04] 2026-01-08 06:26:05,892 | INFO     | did not find any defunct processes belonging to 20981
[2026-01-08 07:27:04] 2026-01-08 06:26:05,892 | INFO     | ready for new job
[2026-01-08 07:27:04] 2026-01-08 06:26:05,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:27:04] 2026-01-08 06:26:05,895 | INFO     | ***************************************
[2026-01-08 07:27:04] 2026-01-08 06:26:05,895 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:27:04] 2026-01-08 06:26:05,895 | INFO     | ***************************************
[2026-01-08 07:27:04] 2026-01-08 06:26:05,895 | INFO     | 
[2026-01-08 07:27:04] 2026-01-08 06:26:05,896 | INFO     | pilot is running in a VM
[2026-01-08 07:27:04] 2026-01-08 06:26:05,896 | INFO     | architecture information:
[2026-01-08 07:27:04] 2026-01-08 06:26:05,896 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:27:04] 2026-01-08 06:26:06,173 | INFO     | cat /etc/os-release:
[2026-01-08 07:27:04] NAME="CentOS Linux"
[2026-01-08 07:27:04] VERSION="7 (Core)"
[2026-01-08 07:27:04] ID="centos"
[2026-01-08 07:27:04] ID_LIKE="rhel fedora"
[2026-01-08 07:27:04] VERSION_ID="7"
[2026-01-08 07:27:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:27:04] ANSI_COLOR="0;31"
[2026-01-08 07:27:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:27:04] HOME_URL="https://www.centos.org/"
[2026-01-08 07:27:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:27:04] 
[2026-01-08 07:27:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:27:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:27:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:27:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:27:04] 
[2026-01-08 07:27:04] 2026-01-08 06:26:06,173 | INFO     | ***************************************
[2026-01-08 07:27:04] 2026-01-08 06:26:06,678 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-08 07:27:04] 2026-01-08 06:26:06,935 | INFO     | sufficient remaining disk space (496910729216 B)
[2026-01-08 07:27:04] 2026-01-08 06:26:06,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:27:04] 2026-01-08 06:26:06,936 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:27:04] 2026-01-08 06:26:06,936 | INFO     | update_server=False
[2026-01-08 07:27:04] 2026-01-08 06:26:06,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:27:04] 2026-01-08 06:26:06,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:27:04] 2026-01-08 06:26:06,937 | INFO     | aborting loop
[2026-01-08 07:27:04] 2026-01-08 06:26:06,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:27:04] 2026-01-08 06:26:06,957 | INFO     | all payload control threads have been joined
[2026-01-08 07:27:04] 2026-01-08 06:26:07,915 | INFO     | all job control threads have been joined
[2026-01-08 07:27:04] 2026-01-08 06:26:07,941 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:07,943 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:07,963 | INFO     | [payload] control thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,005 | INFO     | all data control threads have been joined
[2026-01-08 07:27:04] 2026-01-08 06:26:08,171 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:27:04] 2026-01-08 06:26:08,468 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,550 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,576 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,607 | INFO     | [job] validate thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,656 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,842 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,921 | INFO     | [job] control thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:08,945 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:09,011 | INFO     | [data] control thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:09,095 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:09,383 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:10,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:27:04] 2026-01-08 06:26:14,116 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:27:04] 2026-01-08 06:26:35,506 | INFO     | PID=14514 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 07:27:04] 2026-01-08 06:26:35,507 | INFO     | .. there are 2 such processes running
[2026-01-08 07:27:04] 2026-01-08 06:26:35,507 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:27:04] 2026-01-08 06:26:35,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:27:04] 2026-01-08 06:26:35,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:27:04] 2026-01-08 06:26:53,100 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:27:04] 2026-01-08 06:26:54,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479364659008)>', '<ExcThread(monitor, started 140478716573440)>']
[2026-01-08 07:27:04] 2026-01-08 06:26:54,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:27:04] 2026-01-08 06:26:54,622 | INFO     | [monitor] control thread has ended
[2026-01-08 07:27:04] 2026-01-08 06:26:59,132 | INFO     | all workflow threads have been joined
[2026-01-08 07:27:04] 2026-01-08 06:26:59,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:27:04] 2026-01-08 06:26:59,133 | INFO     | traces error code: 0
[2026-01-08 07:27:04] 2026-01-08 06:26:59,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:27:04] 2026-01-08 06:26:59,555 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:27:04] 2026-01-08 06:26:59,614 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:27:04] 2026-01-08 06:26:59,663 [wrapper] pilotpid: 14514
[2026-01-08 07:27:04] 2026-01-08 06:26:59,767 [wrapper] Pilot exit status: 0
[2026-01-08 07:27:04] 2026-01-08 06:27:00,257 [wrapper] pandaids: 6962322135
[2026-01-08 07:27:04] 2026-01-08 06:27:01,211 [wrapper] cleanup supervisor_pilot 20376 14515
[2026-01-08 07:27:04] 2026-01-08 06:27:01,301 [wrapper] Test setup, not cleaning
[2026-01-08 07:27:04] 2026-01-08 06:27:01,396 [wrapper] apfmon messages muted
[2026-01-08 07:27:04] 2026-01-08 06:27:01,506 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:27:04] 2026-01-08 06:27:01,684 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:27:04]  *** Error codes and diagnostics ***
[2026-01-08 07:27:04]     "exeErrorCode": 0,
[2026-01-08 07:27:04]     "exeErrorDiag": "",
[2026-01-08 07:27:04]     "pilotErrorCode": 0,
[2026-01-08 07:27:04]     "pilotErrorDiag": "",
[2026-01-08 07:27:04]  *** Listing of results directory ***
[2026-01-08 07:27:04] total 443004
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 07:27:04] -rwx------. 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:12 queuedata.json
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc       100 Jan  8 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:27:04] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 01:18 run_atlas
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc       105 Jan  8 01:18 job.xml
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc 227443228 Jan  8 01:18 EVNT.47898824._000707.pool.root.1
[2026-01-08 07:27:04] drwxrwx--x. 2 boinc boinc        68 Jan  8 01:18 shared
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc    592389 Jan  8 01:18 input.tar.gz
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc      6389 Jan  8 01:18 init_data.xml
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc     15847 Jan  8 01:18 start_atlas.sh
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc         0 Jan  8 01:18 boinc_lockfile
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc      2518 Jan  8 01:18 pandaJob.out
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc    989777 Jan  8 01:23 agis_schedconf.cvmfs.json
[2026-01-08 07:27:04] drwx------. 5 boinc boinc      4096 Jan  8 01:23 pilot3
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc 215441925 Jan  8 07:22 HITS.47898826._015067.pool.root.1
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc       531 Jan  8 07:23 boinc_task_state.xml
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc      1011 Jan  8 07:24 memory_monitor_summary.json
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc   1516240 Jan  8 07:24 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc    538710 Jan  8 07:24 log.47898826._015067.job.log.tgz.1
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc        95 Jan  8 07:25 pilot_heartbeat.json
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc      7773 Jan  8 07:26 heartbeat.json
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc      8192 Jan  8 07:26 boinc_mmap_file
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc        28 Jan  8 07:26 wrapper_checkpoint.txt
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc      4884 Jan  8 07:26 pilotlog.txt
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc   2883853 Jan  8 07:27 log.47898826._015067.job.log.1
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc       357 Jan  8 07:27 output.list
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc       620 Jan  8 07:27 runtime_log
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc   3440640 Jan  8 07:27 result.tar.gz
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc      8817 Jan  8 07:27 runtime_log.err
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc       657 Jan  8 07:27 HK0MDmLupx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn0iKDmayDbBn.diag
[2026-01-08 07:27:04] -rw-r--r--. 1 boinc boinc     20775 Jan  8 07:27 stderr.txt
[2026-01-08 07:27:04] HITS file was successfully produced:
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc 215441925 Jan  8 07:22 shared/HITS.pool.root.1
[2026-01-08 07:27:04]  *** Contents of shared directory: ***
[2026-01-08 07:27:04] total 436468
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc 227443228 Jan  8 01:18 ATLAS.root_0
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc    592389 Jan  8 01:18 input.tar.gz
[2026-01-08 07:27:04] -rw-r--r--. 2 boinc boinc     15847 Jan  8 01:18 start_atlas.sh
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc 215441925 Jan  8 07:22 HITS.pool.root.1
[2026-01-08 07:27:04] -rw-------. 1 boinc boinc   3440640 Jan  8 07:27 result.tar.gz
07:27:05 (10467): run_atlas exited; CPU time 79914.617657
07:27:05 (10467): called boinc_finish(0)

</stderr_txt>
]]>

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