Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:14 (2852425): wrapper (7.7.26015): starting
16:21:14 (2852425): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 16:21:14] Arguments: --nthreads 12
[2026-01-07 16:21:14] Threads: 12
[2026-01-07 16:21:14] Checking for CVMFS
[2026-01-07 16:21:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 16:21:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 16:21:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 16:21:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 16:21:16] 2.11.5.0 1774115 54410 234744 154884 2 773 44365968 45568001 16398 130560 0 331954852 99.771 224220775 18060 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-07 16:21:16] CVMFS is ok
[2026-01-07 16:21:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 16:21:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 16:21:16] Further information can be found at the LHC@home message board.
[2026-01-07 16:21:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 16:21:16] Checking for apptainer binary...
[2026-01-07 16:21:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 16:21:16] Running /usr/bin/apptainer --version
[2026-01-07 16:21:16] apptainer version 1.4.1-1.el9
[2026-01-07 16:21:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 16:21:17] wns0089.triumf.lcg
[2026-01-07 16:21:17] apptainer works
[2026-01-07 16:21:17] Set ATHENA_PROC_NUMBER=12
[2026-01-07 16:21:17] Set ATHENA_CORE_NUMBER=12
[2026-01-07 16:21:17] Starting ATLAS job with PandaID=6962321753
[2026-01-07 16:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 16:26:54]  *** The last 200 lines of the pilot log: ***
[2026-01-07 16:26:54] 2026-01-08 00:26:01,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | WARNING  | wrong length of table data, x=[1767831795.0], y=[1117.0] (must be same and length>=4)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | could have reported an average CPU frequency of 2775 MHz (4 samples)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . Timing measurements:
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . get job = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . initial setup = 3 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload setup = 24 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-in = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload execution = 42 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-out = 1 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . log creation = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962321753/pilotlog.txt
[2026-01-07 16:26:54] 2026-01-08 00:26:01,986 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-07 16:26:54] - Log from pilotlog.txt -
[2026-01-07 16:26:54] 2026-01-08 00:26:01,955 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962321753/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | INFO     | extracted standard info from prmon json
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 16:26:54] 2026-01-08 00:26:01,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 16:26:54] 2026-01-08 00:26:01,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | WARNING  | wrong length of table data, x=[1767831795.0], y=[1117.0] (must be same and length>=4)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | could have reported an average CPU frequency of 2775 MHz (4 samples)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . Timing measurements:
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . get job = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . initial setup = 3 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload setup = 24 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-in = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload execution = 42 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-out = 1 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . log creation = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962321753/pilotlog.txt
[2026-01-07 16:26:54] 2026-01-08 00:26:01,986 | WARNING  | 
[2026-01-07 16:26:54] [begin log extracts]
[2026-01-07 16:26:54] - Log from pilotlog.txt -
[2026-01-07 16:26:54] 2026-01-08 00:26:01,955 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962321753/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | INFO     | extracted standard info from prmon json
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 16:26:54] 2026-01-08 00:26:01,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 16:26:54] 2026-01-08 00:26:01,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 16:26:54] 2026-01-08 00:26:01,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | WARNING  | wrong length of table data, x=[1767831795.0], y=[1117.0] (must be same and length>=4)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | could have reported an average CPU frequency of 2775 MHz (4 samples)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,958 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . Timing measurements:
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . get job = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . initial setup = 3 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload setup = 24 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-in = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . payload execution = 42 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . stage-out = 1 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | . log creation = 0 s
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | ..............................
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 16:26:54] 2026-01-08 00:26:01,959 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962321753/pilotlog.txt
[2026-01-07 16:26:54] [end log extracts]
[2026-01-07 16:26:54] 2026-01-08 00:26:01,986 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-07 16:26:54] 2026-01-08 00:26:01,987 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-07 16:26:54] 2026-01-08 00:26:02,045 | INFO     | 
[2026-01-07 16:26:54] 2026-01-08 00:26:02,050 | INFO     | job summary report
[2026-01-07 16:26:54] 2026-01-08 00:26:02,052 | INFO     | --------------------------------------------------
[2026-01-07 16:26:54] 2026-01-08 00:26:02,053 | INFO     | PanDA job id: 6962321753
[2026-01-07 16:26:54] 2026-01-08 00:26:02,055 | INFO     | task id: 47898826
[2026-01-07 16:26:54] 2026-01-08 00:26:02,056 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-07 16:23:36,689 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | pilot state: failed 
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | transexitcode: 65
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | exeerrorcode: 65
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | exitcode: 65
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | cpuconsumptiontime: 16 s
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | nevents: 0
[2026-01-07 16:26:54] 2026-01-08 00:26:02,058 | INFO     | neventsw: 0
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | pid: 2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | pgrp: 2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | corecount: 12
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | event service: False
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | sizes: {0: 2283795, 1: 2283994, 12: 2283994, 23: 2284312, 34: 2284312, 71: 2307892, 73: 2312184, 76: 2312212, 207: 2312406}
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | --------------------------------------------------
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | 
[2026-01-07 16:26:54] 2026-01-08 00:26:02,059 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-07 16:26:54] 2026-01-08 00:26:02,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 16:26:54] 2026-01-08 00:26:02,161 | INFO     | job 6962321753 has completed (purged errors)
[2026-01-07 16:26:54] 2026-01-08 00:26:02,161 | INFO     | overall cleanup function is called
[2026-01-07 16:26:54] 2026-01-08 00:26:03,049 | INFO     | PID=2857356 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-07 16:26:54] 2026-01-08 00:26:03,049 | INFO     | .. there are 49 such processes running
[2026-01-07 16:26:54] 2026-01-08 00:26:03,166 | INFO     | --- collectZombieJob: --- 10, [2871403]
[2026-01-07 16:26:54] 2026-01-08 00:26:03,169 | INFO     | zombie collector waiting for pid 2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:03,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 16:26:54] 2026-01-08 00:26:03,172 | INFO     | collected zombie processes
[2026-01-07 16:26:54] 2026-01-08 00:26:03,173 | INFO     | will attempt to kill all subprocesses of pid=2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:03,814 | INFO     | process IDs to be killed: [2871403] (in reverse order)
[2026-01-07 16:26:54] 2026-01-08 00:26:03,910 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 16:26:54] 2026-01-08 00:26:03,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 16:26:54] 2026-01-08 00:26:03,978 | INFO     | did not find any defunct processes belonging to 2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:04,014 | INFO     | did not find any defunct processes belonging to 2871403
[2026-01-07 16:26:54] 2026-01-08 00:26:04,015 | INFO     | ready for new job
[2026-01-07 16:26:54] 2026-01-08 00:26:04,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 16:26:54] 2026-01-08 00:26:04,016 | INFO     | ***************************************
[2026-01-07 16:26:54] 2026-01-08 00:26:04,017 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 16:26:54] 2026-01-08 00:26:04,017 | INFO     | ***************************************
[2026-01-07 16:26:54] 2026-01-08 00:26:04,017 | INFO     | 
[2026-01-07 16:26:54] 2026-01-08 00:26:04,019 | INFO     | architecture information:
[2026-01-07 16:26:54] 2026-01-08 00:26:04,050 | INFO     | executing command: cat /etc/os-release
[2026-01-07 16:26:54] 2026-01-08 00:26:04,080 | INFO     | cat /etc/os-release:
[2026-01-07 16:26:54] NAME="CentOS Linux"
[2026-01-07 16:26:54] VERSION="7 (Core)"
[2026-01-07 16:26:54] ID="centos"
[2026-01-07 16:26:54] ID_LIKE="rhel fedora"
[2026-01-07 16:26:54] VERSION_ID="7"
[2026-01-07 16:26:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 16:26:54] ANSI_COLOR="0;31"
[2026-01-07 16:26:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 16:26:54] HOME_URL="https://www.centos.org/"
[2026-01-07 16:26:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 16:26:54] 
[2026-01-07 16:26:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 16:26:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 16:26:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 16:26:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 16:26:54] 
[2026-01-07 16:26:54] 2026-01-08 00:26:04,081 | INFO     | ***************************************
[2026-01-07 16:26:54] 2026-01-08 00:26:04,584 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-07 16:26:54] 2026-01-08 00:26:04,687 | INFO     | sufficient remaining disk space (2034165088256 B)
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | INFO     | update_server=False
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | INFO     | aborting loop
[2026-01-07 16:26:54] 2026-01-08 00:26:04,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 16:26:54] 2026-01-08 00:26:04,702 | INFO     | all data control threads have been joined
[2026-01-07 16:26:54] 2026-01-08 00:26:04,718 | INFO     | all payload control threads have been joined
[2026-01-07 16:26:54] 2026-01-08 00:26:05,236 | INFO     | all job control threads have been joined
[2026-01-07 16:26:54] 2026-01-08 00:26:05,694 | INFO     | [job] retrieve thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:05,695 | INFO     | [job] job monitor thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:05,708 | INFO     | [data] control thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:05,723 | INFO     | [payload] control thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,058 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,242 | INFO     | [job] control thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,312 | INFO     | [payload] failed_post thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,374 | INFO     | [data] copytool_in thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,480 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,525 | INFO     | [job] validate thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,581 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,668 | INFO     | [payload] validate_post thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:06,695 | INFO     | [data] copytool_out thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:07,069 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:07,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 16:26:54] 2026-01-08 00:26:08,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 16:26:54] 2026-01-08 00:26:08,077 | INFO     | [job] queue monitor thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:12,038 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 16:26:54] 2026-01-08 00:26:35,591 | INFO     | PID=2857356 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-07 16:26:54] 2026-01-08 00:26:35,591 | INFO     | .. there are 49 such processes running
[2026-01-07 16:26:54] 2026-01-08 00:26:35,591 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 16:26:54] 2026-01-08 00:26:35,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 16:26:54] 2026-01-08 00:26:35,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 16:26:54] 2026-01-08 00:26:46,457 | INFO     | [monitor] cgroup control has ended
[2026-01-07 16:26:54] 2026-01-08 00:26:48,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664403822400)>', '<ExcThread(monitor, started 139663243196160)>']
[2026-01-07 16:26:54] 2026-01-08 00:26:48,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 16:26:54] 2026-01-08 00:26:48,682 | INFO     | [monitor] control thread has ended
[2026-01-07 16:26:54] 2026-01-08 00:26:53,322 | INFO     | all workflow threads have been joined
[2026-01-07 16:26:54] 2026-01-08 00:26:53,322 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 16:26:54] 2026-01-08 00:26:53,322 | INFO     | traces error code: 0
[2026-01-07 16:26:54] 2026-01-08 00:26:53,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 16:26:54] 2026-01-08 00:26:53,732 [wrapper] ==== pilot stdout END ====
[2026-01-07 16:26:54] 2026-01-08 00:26:53,734 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 16:26:54] 2026-01-08 00:26:53,735 [wrapper] pilotpid: 2857356
[2026-01-07 16:26:54] 2026-01-08 00:26:53,737 [wrapper] Pilot exit status: 0
[2026-01-07 16:26:54] 2026-01-08 00:26:53,797 [wrapper] pandaids: 6962321753
[2026-01-07 16:26:54] 2026-01-08 00:26:54,206 [wrapper] cleanup supervisor_pilot 2857362 2857357
[2026-01-07 16:26:54] 2026-01-08 00:26:54,216 [wrapper] Test setup, not cleaning
[2026-01-07 16:26:54] 2026-01-08 00:26:54,254 [wrapper] apfmon messages muted
[2026-01-07 16:26:54] 2026-01-08 00:26:54,267 [wrapper] ==== wrapper stdout END ====
[2026-01-07 16:26:54] 2026-01-08 00:26:54,345 [wrapper] ==== wrapper stderr END ====
[2026-01-07 16:26:54]  *** Error codes and diagnostics ***
[2026-01-07 16:26:54]     "exeErrorCode": 65,
[2026-01-07 16:26:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 16:26:54]     "pilotErrorCode": 1305,
[2026-01-07 16:26:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 16:26:54]  *** Listing of results directory ***
[2026-01-07 16:26:55] total 223848
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc    579449 Jan  7 13:00 pilot3.tar.gz
[2026-01-07 16:26:55] -rwx------. 1 boinc boinc     36322 Jan  7 13:06 runpilot2-wrapper.sh
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc      5112 Jan  7 13:12 queuedata.json
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc       100 Jan  7 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 16:26:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 16:21 run_atlas
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc       105 Jan  7 16:21 job.xml
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc      6595 Jan  7 16:21 init_data.xml
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc 225075784 Jan  7 16:21 EVNT.47898824._000702.pool.root.1
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc     15847 Jan  7 16:21 start_atlas.sh
[2026-01-07 16:26:55] drwxrwx--x. 2 boinc boinc      4096 Jan  7 16:21 shared
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc    592400 Jan  7 16:21 input.tar.gz
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc         0 Jan  7 16:21 boinc_lockfile
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc      2519 Jan  7 16:21 pandaJob.out
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc    989785 Jan  7 16:21 agis_schedconf.cvmfs.json
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc   1516240 Jan  7 16:21 agis_ddmendpoints.agis.ALL.json
[2026-01-07 16:26:55] drwx------. 5 boinc boinc      4096 Jan  7 16:21 pilot3
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc       989 Jan  7 16:23 memory_monitor_summary.json
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc     22014 Jan  7 16:23 log.47898826._014954.job.log.tgz.1
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc        95 Jan  7 16:25 pilot_heartbeat.json
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc      8428 Jan  7 16:26 heartbeat.json
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc       524 Jan  7 16:26 boinc_task_state.xml
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc      4823 Jan  7 16:26 pilotlog.txt
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc     92709 Jan  7 16:26 log.47898826._014954.job.log.1
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc      8192 Jan  7 16:26 boinc_mmap_file
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc        22 Jan  7 16:26 wrapper_checkpoint.txt
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc       188 Jan  7 16:26 output.list
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc       620 Jan  7 16:26 runtime_log
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc    133120 Jan  7 16:26 result.tar.gz
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc       645 Jan  7 16:26 xWdLDmLupx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxziKDm1vQTSm.diag
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc      8636 Jan  7 16:26 runtime_log.err
[2026-01-07 16:26:55] -rw-r--r--. 1 boinc boinc     21927 Jan  7 16:26 stderr.txt
[2026-01-07 16:26:55] No HITS result produced
[2026-01-07 16:26:55]  *** Contents of shared directory: ***
[2026-01-07 16:26:55] total 220536
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc 225075784 Jan  7 16:21 ATLAS.root_0
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc     15847 Jan  7 16:21 start_atlas.sh
[2026-01-07 16:26:55] -rw-r--r--. 2 boinc boinc    592400 Jan  7 16:21 input.tar.gz
[2026-01-07 16:26:55] -rw-------. 1 boinc boinc    133120 Jan  7 16:26 result.tar.gz
16:26:56 (2852425): run_atlas exited; CPU time 27.023662
16:26:56 (2852425): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN