Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:50 (15760): wrapper (7.7.26015): starting
19:03:50 (15760): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 19:03:50] Arguments: --nthreads 8
[2026-01-07 19:03:50] Threads: 8
[2026-01-07 19:03:50] Checking for CVMFS
[2026-01-07 19:03:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 19:03:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 19:03:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 19:03:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 19:03:51] 2.11.2.0 2840 128810 82816 154884 2 58 17483737 20275200 1 130560 0 30750669 99.811 8315456 30730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 19:03:51] CVMFS is ok
[2026-01-07 19:03:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 19:03:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 19:03:51] Further information can be found at the LHC@home message board.
[2026-01-07 19:03:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 19:03:51] Checking for apptainer binary...
[2026-01-07 19:03:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 19:03:51] Running /usr/bin/apptainer --version
[2026-01-07 19:03:51] apptainer version 1.3.2-1.el7
[2026-01-07 19:03:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 19:03:52] c-204-39.aglt2.org
[2026-01-07 19:03:52] apptainer works
[2026-01-07 19:03:52] Set ATHENA_PROC_NUMBER=8
[2026-01-07 19:03:52] Set ATHENA_CORE_NUMBER=8
[2026-01-07 19:03:52] Starting ATLAS job with PandaID=6962321693
[2026-01-07 19:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 22:03:33]  *** The last 200 lines of the pilot log: ***
[2026-01-07 22:03:33] 2026-01-08 03:02:53,435 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-07 22:03:33] 2026-01-08 03:02:53,439 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-07 22:03:33] 2026-01-08 03:02:53,440 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962321693/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,442 | INFO     | extracted standard info from prmon json
[2026-01-07 22:03:33] 2026-01-08 03:02:53,442 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 22:03:33] 2026-01-08 03:02:53,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 22:03:33] 2026-01-08 03:02:53,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 22:03:33] 2026-01-08 03:02:53,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 22:03:33] 2026-01-08 03:02:53,447 | INFO     | fitting pss+swap vs Time
[2026-01-07 22:03:33] 2026-01-08 03:02:53,447 | INFO     | sum of square deviations: 1690450300.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,448 | INFO     | sum of deviations: 16048571862.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,448 | INFO     | mean x: 1767836017.5
[2026-01-07 22:03:33] 2026-01-08 03:02:53,449 | INFO     | mean y: 2473642.897727273
[2026-01-07 22:03:33] 2026-01-08 03:02:53,449 | INFO     | intersect: -16780772434.837086
[2026-01-07 22:03:33] 2026-01-08 03:02:53,449 | INFO     | chi2: 2.117434153716835
[2026-01-07 22:03:33] 2026-01-08 03:02:53,449 | INFO     | sum of square deviations: 1550429070.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,450 | INFO     | sum of deviations: 27017767724.999996
[2026-01-07 22:03:33] 2026-01-08 03:02:53,450 | INFO     | mean x: 1767835865.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,451 | INFO     | mean y: 2485297.3391812867
[2026-01-07 22:03:33] 2026-01-08 03:02:53,451 | INFO     | intersect: -30803811940.42769
[2026-01-07 22:03:33] 2026-01-08 03:02:53,451 | INFO     | chi2: 1.345810936883079
[2026-01-07 22:03:33] 2026-01-08 03:02:53,451 | INFO     | current chi2=1.345810936883079 (change=36.44142678436013 %)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,451 | INFO     | sum of square deviations: 1418361477.5
[2026-01-07 22:03:33] 2026-01-08 03:02:53,452 | INFO     | sum of deviations: 26120542210.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,452 | INFO     | mean x: 1767835712.5
[2026-01-07 22:03:33] 2026-01-08 03:02:53,452 | INFO     | mean y: 2484261.012048193
[2026-01-07 22:03:33] 2026-01-08 03:02:53,453 | INFO     | intersect: -32553974780.79218
[2026-01-07 22:03:33] 2026-01-08 03:02:53,453 | INFO     | chi2: 1.3465715719644513
[2026-01-07 22:03:33] 2026-01-08 03:02:53,453 | INFO     | current chi2=1.3465715719644513 (change=-0.05651871749042963 %)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,453 | INFO     | right removable region: 165
[2026-01-07 22:03:33] 2026-01-08 03:02:53,453 | INFO     | sum of square deviations: 1550429070.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,454 | INFO     | sum of deviations: -8197833798.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,454 | INFO     | mean x: 1767836170.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,455 | INFO     | mean y: 2499674.98245614
[2026-01-07 22:03:33] 2026-01-08 03:02:53,455 | INFO     | intersect: 9349865113.475475
[2026-01-07 22:03:33] 2026-01-08 03:02:53,455 | INFO     | chi2: 0.8190097535996346
[2026-01-07 22:03:33] 2026-01-08 03:02:53,455 | INFO     | current chi2=0.8190097535996346 (change=61.320650648711464 %)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,455 | INFO     | sum of square deviations: 1418361477.5
[2026-01-07 22:03:33] 2026-01-08 03:02:53,456 | INFO     | sum of deviations: -5830621529.499999
[2026-01-07 22:03:33] 2026-01-08 03:02:53,456 | INFO     | mean x: 1767836322.5
[2026-01-07 22:03:33] 2026-01-08 03:02:53,457 | INFO     | mean y: 2496877.5722891567
[2026-01-07 22:03:33] 2026-01-08 03:02:53,457 | INFO     | intersect: 7269744815.501853
[2026-01-07 22:03:33] 2026-01-08 03:02:53,457 | INFO     | chi2: 0.7967976462308836
[2026-01-07 22:03:33] 2026-01-08 03:02:53,457 | INFO     | current chi2=0.7967976462308836 (change=2.712068723373128 %)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,457 | INFO     | left removable region: 20
[2026-01-07 22:03:33] 2026-01-08 03:02:53,458 | INFO     | sum of square deviations: 945282840.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,458 | INFO     | sum of deviations: 2489133792.0000005
[2026-01-07 22:03:33] 2026-01-08 03:02:53,458 | INFO     | mean x: 1767836292.0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,459 | INFO     | mean y: 2512986.206896552
[2026-01-07 22:03:33] 2026-01-08 03:02:53,459 | INFO     | intersect: -4652581623.50926
[2026-01-07 22:03:33] 2026-01-08 03:02:53,459 | INFO     | chi2: 0.0007095002387707506
[2026-01-07 22:03:33] 2026-01-08 03:02:53,459 | INFO     | current memory leak: 2.63 B/s (using 145 data points, chi2=0.00)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,459 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | ..............................
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . Timing measurements:
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . get job = 0 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . initial setup = 2 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . payload setup = 8 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . stage-in = 0 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . payload execution = 10684 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,460 | INFO     | . stage-out = 0 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,461 | INFO     | . log creation = 0 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,461 | INFO     | ..............................
[2026-01-07 22:03:33] 2026-01-08 03:02:53,549 | INFO     | 
[2026-01-07 22:03:33] 2026-01-08 03:02:53,549 | INFO     | job summary report
[2026-01-07 22:03:33] 2026-01-08 03:02:53,549 | INFO     | --------------------------------------------------
[2026-01-07 22:03:33] 2026-01-08 03:02:53,549 | INFO     | PanDA job id: 6962321693
[2026-01-07 22:03:33] 2026-01-08 03:02:53,550 | INFO     | task id: 47898826
[2026-01-07 22:03:33] 2026-01-08 03:02:53,550 | INFO     | errors: (none)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,550 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 22:03:33] 2026-01-08 03:02:53,550 | INFO     | pilot state: finished 
[2026-01-07 22:03:33] 2026-01-08 03:02:53,550 | INFO     | transexitcode: 0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | exeerrorcode: 0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | exeerrordiag: 
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | exitcode: 0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | exitmsg: OK
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | cpuconsumptiontime: 80186 s
[2026-01-07 22:03:33] 2026-01-08 03:02:53,551 | INFO     | nevents: 400
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | neventsw: 0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | pid: 26065
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | pgrp: 26065
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | corecount: 8
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | event service: False
[2026-01-07 22:03:33] 2026-01-08 03:02:53,552 | INFO     | sizes: {0: 2283969, 6: 2284231, 11: 2284259, 10696: 2313231, 10698: 2322285, 10707: 2322487}
[2026-01-07 22:03:33] 2026-01-08 03:02:53,553 | INFO     | --------------------------------------------------
[2026-01-07 22:03:33] 2026-01-08 03:02:53,553 | INFO     | 
[2026-01-07 22:03:33] 2026-01-08 03:02:53,553 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-07 22:03:33] 2026-01-08 03:02:53,582 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,582 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 22:03:33] 2026-01-08 03:02:53,587 | INFO     | job 6962321693 has completed (purged errors)
[2026-01-07 22:03:33] 2026-01-08 03:02:53,587 | INFO     | overall cleanup function is called
[2026-01-07 22:03:33] 2026-01-08 03:02:54,595 | INFO     | --- collectZombieJob: --- 10, [26065]
[2026-01-07 22:03:33] 2026-01-08 03:02:54,595 | INFO     | zombie collector waiting for pid 26065
[2026-01-07 22:03:33] 2026-01-08 03:02:54,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 22:03:33] 2026-01-08 03:02:54,596 | INFO     | collected zombie processes
[2026-01-07 22:03:33] 2026-01-08 03:02:54,596 | INFO     | will attempt to kill all subprocesses of pid=26065
[2026-01-07 22:03:33] 2026-01-08 03:02:54,692 | INFO     | process IDs to be killed: [26065] (in reverse order)
[2026-01-07 22:03:33] 2026-01-08 03:02:54,754 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 22:03:33] 2026-01-08 03:02:54,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 22:03:33] 2026-01-08 03:02:54,758 | INFO     | did not find any defunct processes belonging to 26065
[2026-01-07 22:03:33] 2026-01-08 03:02:54,762 | INFO     | did not find any defunct processes belonging to 26065
[2026-01-07 22:03:33] 2026-01-08 03:02:54,762 | INFO     | ready for new job
[2026-01-07 22:03:33] 2026-01-08 03:02:54,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 22:03:33] 2026-01-08 03:02:54,764 | INFO     | ***************************************
[2026-01-07 22:03:33] 2026-01-08 03:02:54,765 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 22:03:33] 2026-01-08 03:02:54,765 | INFO     | ***************************************
[2026-01-07 22:03:33] 2026-01-08 03:02:54,765 | INFO     | 
[2026-01-07 22:03:33] 2026-01-08 03:02:54,765 | INFO     | architecture information:
[2026-01-07 22:03:33] 2026-01-08 03:02:54,766 | INFO     | executing command: cat /etc/os-release
[2026-01-07 22:03:33] 2026-01-08 03:02:54,784 | INFO     | cat /etc/os-release:
[2026-01-07 22:03:33] NAME="CentOS Linux"
[2026-01-07 22:03:33] VERSION="7 (Core)"
[2026-01-07 22:03:33] ID="centos"
[2026-01-07 22:03:33] ID_LIKE="rhel fedora"
[2026-01-07 22:03:33] VERSION_ID="7"
[2026-01-07 22:03:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 22:03:33] ANSI_COLOR="0;31"
[2026-01-07 22:03:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 22:03:33] HOME_URL="https://www.centos.org/"
[2026-01-07 22:03:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 22:03:33] 
[2026-01-07 22:03:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 22:03:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 22:03:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 22:03:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 22:03:33] 
[2026-01-07 22:03:33] 2026-01-08 03:02:54,785 | INFO     | ***************************************
[2026-01-07 22:03:33] 2026-01-08 03:02:55,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-07 22:03:33] 2026-01-08 03:02:55,309 | INFO     | sufficient remaining disk space (18494783488 B)
[2026-01-07 22:03:33] 2026-01-08 03:02:55,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 22:03:33] 2026-01-08 03:02:55,309 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 22:03:33] 2026-01-08 03:02:55,310 | INFO     | update_server=False
[2026-01-07 22:03:33] 2026-01-08 03:02:55,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 22:03:33] 2026-01-08 03:02:55,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 22:03:33] 2026-01-08 03:02:55,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 22:03:33] 2026-01-08 03:02:55,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 22:03:33] 2026-01-08 03:02:55,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-07 22:03:33] 2026-01-08 03:02:55,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-07 22:03:33] 2026-01-08 03:02:55,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 22:03:33] 2026-01-08 03:02:55,585 | INFO     | will abort loop
[2026-01-07 22:03:33] 2026-01-08 03:02:55,756 | INFO     | all data control threads have been joined
[2026-01-07 22:03:33] 2026-01-08 03:02:55,759 | INFO     | all job control threads have been joined
[2026-01-07 22:03:33] 2026-01-08 03:02:55,861 | INFO     | all payload control threads have been joined
[2026-01-07 22:03:33] 2026-01-08 03:02:56,316 | INFO     | [job] retrieve thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,316 | INFO     | [job] queue monitor thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,542 | INFO     | [job] validate thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,559 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,591 | INFO     | [job] job monitor thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,692 | INFO     | [payload] validate_post thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,757 | INFO     | [data] control thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,765 | INFO     | [job] control thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,867 | INFO     | [payload] control thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:56,959 | INFO     | [payload] failed_post thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:57,297 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:57,317 | INFO     | [data] copytool_out thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:57,807 | INFO     | [data] copytool_in thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:57,808 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:02:59,317 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:03:06,030 | INFO     | job.realtimelogging is not enabled
[2026-01-07 22:03:33] 2026-01-08 03:03:07,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 22:03:33] 2026-01-08 03:03:25,959 | INFO     | PID=19513 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 22:03:33] 2026-01-08 03:03:25,959 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 22:03:33] 2026-01-08 03:03:25,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 22:03:33] 2026-01-08 03:03:25,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 22:03:33] 2026-01-08 03:03:26,380 | INFO     | [monitor] cgroup control has ended
[2026-01-07 22:03:33] 2026-01-08 03:03:27,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140308998199104)>', '<ExcThread(monitor, started 140308092270336)>']
[2026-01-07 22:03:33] 2026-01-08 03:03:27,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 22:03:33] 2026-01-08 03:03:27,970 | INFO     | [monitor] control thread has ended
[2026-01-07 22:03:33] 2026-01-08 03:03:32,683 | INFO     | all workflow threads have been joined
[2026-01-07 22:03:33] 2026-01-08 03:03:32,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 22:03:33] 2026-01-08 03:03:32,683 | INFO     | traces error code: 0
[2026-01-07 22:03:33] 2026-01-08 03:03:32,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 22:03:33] 2026-01-08 03:03:32,788 [wrapper] ==== pilot stdout END ====
[2026-01-07 22:03:33] 2026-01-08 03:03:32,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 22:03:33] 2026-01-08 03:03:32,798 [wrapper] pilotpid: 19513
[2026-01-07 22:03:33] 2026-01-08 03:03:32,802 [wrapper] Pilot exit status: 0
[2026-01-07 22:03:33] 2026-01-08 03:03:32,819 [wrapper] pandaids: 6962321693
[2026-01-07 22:03:33] 2026-01-08 03:03:32,865 [wrapper] cleanup supervisor_pilot  6161 19514
[2026-01-07 22:03:33] 2026-01-08 03:03:32,870 [wrapper] Test setup, not cleaning
[2026-01-07 22:03:33] 2026-01-08 03:03:32,875 [wrapper] apfmon messages muted
[2026-01-07 22:03:33] 2026-01-08 03:03:32,880 [wrapper] ==== wrapper stdout END ====
[2026-01-07 22:03:33] 2026-01-08 03:03:32,885 [wrapper] ==== wrapper stderr END ====
[2026-01-07 22:03:33]  *** Error codes and diagnostics ***
[2026-01-07 22:03:33]     "exeErrorCode": 0,
[2026-01-07 22:03:33]     "exeErrorDiag": "",
[2026-01-07 22:03:33]     "pilotErrorCode": 0,
[2026-01-07 22:03:33]     "pilotErrorDiag": "",
[2026-01-07 22:03:33]  *** Listing of results directory ***
[2026-01-07 22:03:33] total 448656
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-07 22:03:33] -rwx------ 1 boincer umatlas     36322 Jan  7 16:06 runpilot2-wrapper.sh
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 16:11 queuedata.json
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas       100 Jan  7 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 22:03:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 19:03 run_atlas
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas       105 Jan  7 19:03 job.xml
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas 224627405 Jan  7 19:03 EVNT.47898824._000700.pool.root.1
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 19:03 start_atlas.sh
[2026-01-07 22:03:33] drwxrwx--x 2 boincer umatlas      4096 Jan  7 19:03 shared
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas    592402 Jan  7 19:03 input.tar.gz
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas         0 Jan  7 19:03 boinc_lockfile
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas      2519 Jan  7 19:03 pandaJob.out
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas        57 Jan  7 19:03 setup.sh.local
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas    989785 Jan  7 19:04 agis_schedconf.cvmfs.json
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas   1516240 Jan  7 19:04 agis_ddmendpoints.agis.ALL.json
[2026-01-07 22:03:33] drwx------ 5 boincer umatlas      4096 Jan  7 19:04 pilot3
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas      5910 Jan  7 22:00 init_data.xml
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas 227090798 Jan  7 22:02 HITS.47898826._014894.pool.root.1
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas       530 Jan  7 22:02 boinc_task_state.xml
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas      1049 Jan  7 22:02 memory_monitor_summary.json
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas        95 Jan  7 22:02 pilot_heartbeat.json
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas    399598 Jan  7 22:02 log.47898826._014894.job.log.tgz.1
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas      7843 Jan  7 22:02 heartbeat.json
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas        28 Jan  7 22:03 wrapper_checkpoint.txt
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas      8192 Jan  7 22:03 boinc_mmap_file
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas      5004 Jan  7 22:03 pilotlog.txt
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas   1492560 Jan  7 22:03 log.47898826._014894.job.log.1
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas       357 Jan  7 22:03 output.list
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas       620 Jan  7 22:03 runtime_log
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas   1914880 Jan  7 22:03 result.tar.gz
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas      9343 Jan  7 22:03 runtime_log.err
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas       662 Jan  7 22:03 LEyNDmJupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUsdKDmsUxnhn.diag
[2026-01-07 22:03:33] -rw-r--r-- 1 boincer umatlas     21007 Jan  7 22:03 stderr.txt
[2026-01-07 22:03:33] HITS file was successfully produced:
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas 227090798 Jan  7 22:02 shared/HITS.pool.root.1
[2026-01-07 22:03:33]  *** Contents of shared directory: ***
[2026-01-07 22:03:33] total 443608
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas 224627405 Jan  7 19:03 ATLAS.root_0
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 19:03 start_atlas.sh
[2026-01-07 22:03:33] -rw-r--r-- 2 boincer umatlas    592402 Jan  7 19:03 input.tar.gz
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas 227090798 Jan  7 22:02 HITS.pool.root.1
[2026-01-07 22:03:33] -rw------- 1 boincer umatlas   1914880 Jan  7 22:03 result.tar.gz
22:03:34 (15760): run_atlas exited; CPU time 80138.585808
22:03:34 (15760): called boinc_finish(0)

</stderr_txt>
]]>

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