Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:15 (291806): wrapper (7.7.26015): starting
00:03:15 (291806): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:03:15] Arguments: --nthreads 12
[2026-01-08 00:03:15] Threads: 12
[2026-01-08 00:03:15] Checking for CVMFS
[2026-01-08 00:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:03:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:03:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:03:17] 2.13.3.0 589311 15015 146208 154891 0 108 33998608 39288832 7079 16776704 0 6067230 99.505 10136408 50875 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 00:03:17] CVMFS is ok
[2026-01-08 00:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:03:17] Further information can be found at the LHC@home message board.
[2026-01-08 00:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:03:17] Checking for apptainer binary...
[2026-01-08 00:03:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:03:17] Running /usr/bin/apptainer --version
[2026-01-08 00:03:17] apptainer version 1.4.5-2.el9
[2026-01-08 00:03:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:03:18] c-210-23.aglt2.org
[2026-01-08 00:03:18] apptainer works
[2026-01-08 00:03:18] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:03:18] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:03:18] Starting ATLAS job with PandaID=6962321654
[2026-01-08 00:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 13:41:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 13:41:29] 2026-01-08 18:40:51,784 | INFO     | monitor loop #2876: job 0:6962321654 is in state 'finished'
[2026-01-08 13:41:29] 2026-01-08 18:40:51,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:41:29] 2026-01-08 18:40:52,870 | INFO     | time since job start (48975s) is within the limit (174528.0s)
[2026-01-08 13:41:29] 2026-01-08 18:40:54,298 | INFO     | monitor loop #2877: job 0:6962321654 is in state 'finished'
[2026-01-08 13:41:29] 2026-01-08 18:40:54,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,267 | INFO     | PID=297183 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 13:41:29] 2026-01-08 18:40:55,267 | INFO     | .. there are 6 such processes running
[2026-01-08 13:41:29] 2026-01-08 18:40:55,799 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 13:41:29] 2026-01-08 18:40:55,806 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.10285
[2026-01-08 13:41:29] 2026-01-08 18:40:55,813 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962321654/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,814 | INFO     | extracted standard info from prmon json
[2026-01-08 13:41:29] 2026-01-08 18:40:55,814 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:41:29] 2026-01-08 18:40:55,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:41:29] 2026-01-08 18:40:55,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:41:29] 2026-01-08 18:40:55,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:41:29] 2026-01-08 18:40:55,830 | INFO     | fitting pss+swap vs Time
[2026-01-08 13:41:29] 2026-01-08 18:40:55,831 | INFO     | sum of square deviations: 158757937183.12042
[2026-01-08 13:41:29] 2026-01-08 18:40:55,848 | INFO     | sum of deviations: 837474938669.248
[2026-01-08 13:41:29] 2026-01-08 18:40:55,848 | INFO     | mean x: 1767873217.31
[2026-01-08 13:41:29] 2026-01-08 18:40:55,849 | INFO     | mean y: 2667987.40625
[2026-01-08 13:41:29] 2026-01-08 18:40:55,849 | INFO     | intersect: -9323161892.418585
[2026-01-08 13:41:29] 2026-01-08 18:40:55,850 | INFO     | chi2: 5.309398143586945
[2026-01-08 13:41:29] 2026-01-08 18:40:55,851 | INFO     | sum of square deviations: 155799902609.81873
[2026-01-08 13:41:29] 2026-01-08 18:40:55,868 | INFO     | sum of deviations: 884648078320.5175
[2026-01-08 13:41:29] 2026-01-08 18:40:55,868 | INFO     | mean x: 1767873064.8150942
[2026-01-08 13:41:29] 2026-01-08 18:40:55,868 | INFO     | mean y: 2670404.8402515724
[2026-01-08 13:41:29] 2026-01-08 18:40:55,868 | INFO     | intersect: -10035497034.968628
[2026-01-08 13:41:29] 2026-01-08 18:40:55,869 | INFO     | chi2: 4.6097147215035115
[2026-01-08 13:41:29] 2026-01-08 18:40:55,870 | INFO     | current chi2=4.6097147215035115 (change=13.178205950302655 %)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,870 | INFO     | right removable region: 794
[2026-01-08 13:41:29] 2026-01-08 18:40:55,871 | INFO     | sum of square deviations: 155799556008.4478
[2026-01-08 13:41:29] 2026-01-08 18:40:55,887 | INFO     | sum of deviations: 614808855261.3411
[2026-01-08 13:41:29] 2026-01-08 18:40:55,888 | INFO     | mean x: 1767873369.8138366
[2026-01-08 13:41:29] 2026-01-08 18:40:55,888 | INFO     | mean y: 2679454.914465409
[2026-01-08 13:41:29] 2026-01-08 18:40:55,888 | INFO     | intersect: -6973619005.674985
[2026-01-08 13:41:29] 2026-01-08 18:40:55,889 | INFO     | chi2: 2.784124687498961
[2026-01-08 13:41:29] 2026-01-08 18:40:55,889 | INFO     | current chi2=2.784124687498961 (change=47.56232981205567 %)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,890 | INFO     | sum of square deviations: 152878345883.7722
[2026-01-08 13:41:29] 2026-01-08 18:40:55,907 | INFO     | sum of deviations: 502777694806.3807
[2026-01-08 13:41:29] 2026-01-08 18:40:55,907 | INFO     | mean x: 1767873522.3126583
[2026-01-08 13:41:29] 2026-01-08 18:40:55,907 | INFO     | mean y: 2685303.9620253164
[2026-01-08 13:41:29] 2026-01-08 18:40:55,907 | INFO     | intersect: -5811397580.826334
[2026-01-08 13:41:29] 2026-01-08 18:40:55,908 | INFO     | chi2: 2.2405985735959595
[2026-01-08 13:41:29] 2026-01-08 18:40:55,909 | INFO     | current chi2=2.2405985735959595 (change=19.522333764126877 %)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,909 | INFO     | left removable region: 20
[2026-01-08 13:41:29] 2026-01-08 18:40:55,910 | INFO     | sum of square deviations: 143776431319.44858
[2026-01-08 13:41:29] 2026-01-08 18:40:55,925 | INFO     | sum of deviations: 335661438184.3524
[2026-01-08 13:41:29] 2026-01-08 18:40:55,926 | INFO     | mean x: 1767873644.3165374
[2026-01-08 13:41:29] 2026-01-08 18:40:55,926 | INFO     | mean y: 2699369.027131783
[2026-01-08 13:41:29] 2026-01-08 18:40:55,926 | INFO     | intersect: -4124590511.057904
[2026-01-08 13:41:29] 2026-01-08 18:40:55,927 | INFO     | chi2: 0.49476826959434866
[2026-01-08 13:41:29] 2026-01-08 18:40:55,927 | INFO     | current memory leak: 2.33 B/s (using 774 data points, chi2=0.49)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,929 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2026-01-08 13:41:29] 2026-01-08 18:40:55,929 | INFO     | ..............................
[2026-01-08 13:41:29] 2026-01-08 18:40:55,929 | INFO     | . Timing measurements:
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . get job = 0 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . initial setup = 6 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . payload setup = 48 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . stage-in = 0 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . payload execution = 48804 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . stage-out = 4 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | . log creation = 1 s
[2026-01-08 13:41:29] 2026-01-08 18:40:55,930 | INFO     | ..............................
[2026-01-08 13:41:29] 2026-01-08 18:40:56,037 | INFO     | 
[2026-01-08 13:41:29] 2026-01-08 18:40:56,037 | INFO     | job summary report
[2026-01-08 13:41:29] 2026-01-08 18:40:56,037 | INFO     | --------------------------------------------------
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | PanDA job id: 6962321654
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | task id: 47898826
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | errors: (none)
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | pilot state: finished 
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | transexitcode: 0
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | exeerrorcode: 0
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | exeerrordiag: 
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | exitcode: 0
[2026-01-08 13:41:29] 2026-01-08 18:40:56,038 | INFO     | exitmsg: OK
[2026-01-08 13:41:29] 2026-01-08 18:40:56,039 | INFO     | cpuconsumptiontime: 72116 s
[2026-01-08 13:41:29] 2026-01-08 18:40:56,039 | INFO     | nevents: 400
[2026-01-08 13:41:29] 2026-01-08 18:40:56,039 | INFO     | neventsw: 0
[2026-01-08 13:41:29] 2026-01-08 18:40:56,046 | INFO     | pid: 304894
[2026-01-08 13:41:29] 2026-01-08 18:40:56,046 | INFO     | pgrp: 304894
[2026-01-08 13:41:29] 2026-01-08 18:40:56,046 | INFO     | corecount: 12
[2026-01-08 13:41:29] 2026-01-08 18:40:56,047 | INFO     | event service: False
[2026-01-08 13:41:29] 2026-01-08 18:40:56,047 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 14: 2284025, 25: 2284053, 36: 2284081, 38: 2284499, 48: 2284527, 48857: 2330174, 48863: 2339172, 48867: 2339228, 48896:
[2026-01-08 13:41:29] 2026-01-08 18:40:56,047 | INFO     | --------------------------------------------------
[2026-01-08 13:41:29] 2026-01-08 18:40:56,047 | INFO     | 
[2026-01-08 13:41:29] 2026-01-08 18:40:56,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 13:41:29] 2026-01-08 18:40:56,161 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,163 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 13:41:29] 2026-01-08 18:40:56,164 | INFO     | job 6962321654 has completed (purged errors)
[2026-01-08 13:41:29] 2026-01-08 18:40:56,164 | INFO     | overall cleanup function is called
[2026-01-08 13:41:29] 2026-01-08 18:40:57,176 | INFO     | --- collectZombieJob: --- 10, [304894]
[2026-01-08 13:41:29] 2026-01-08 18:40:57,180 | INFO     | zombie collector waiting for pid 304894
[2026-01-08 13:41:29] 2026-01-08 18:40:57,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 13:41:29] 2026-01-08 18:40:57,181 | INFO     | collected zombie processes
[2026-01-08 13:41:29] 2026-01-08 18:40:57,182 | INFO     | will attempt to kill all subprocesses of pid=304894
[2026-01-08 13:41:29] 2026-01-08 18:40:57,720 | INFO     | process IDs to be killed: [304894] (in reverse order)
[2026-01-08 13:41:29] 2026-01-08 18:40:58,058 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 13:41:29] 2026-01-08 18:40:58,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 13:41:29] 2026-01-08 18:40:58,073 | INFO     | did not find any defunct processes belonging to 304894
[2026-01-08 13:41:29] 2026-01-08 18:40:58,087 | INFO     | did not find any defunct processes belonging to 304894
[2026-01-08 13:41:29] 2026-01-08 18:40:58,088 | INFO     | ready for new job
[2026-01-08 13:41:29] 2026-01-08 18:40:58,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 13:41:29] 2026-01-08 18:40:58,095 | INFO     | ***************************************
[2026-01-08 13:41:29] 2026-01-08 18:40:58,096 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 13:41:29] 2026-01-08 18:40:58,096 | INFO     | ***************************************
[2026-01-08 13:41:29] 2026-01-08 18:40:58,096 | INFO     | 
[2026-01-08 13:41:29] 2026-01-08 18:40:58,098 | INFO     | architecture information:
[2026-01-08 13:41:29] 2026-01-08 18:40:58,103 | INFO     | executing command: cat /etc/os-release
[2026-01-08 13:41:29] 2026-01-08 18:40:58,193 | INFO     | cat /etc/os-release:
[2026-01-08 13:41:29] NAME="CentOS Linux"
[2026-01-08 13:41:29] VERSION="7 (Core)"
[2026-01-08 13:41:29] ID="centos"
[2026-01-08 13:41:29] ID_LIKE="rhel fedora"
[2026-01-08 13:41:29] VERSION_ID="7"
[2026-01-08 13:41:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 13:41:29] ANSI_COLOR="0;31"
[2026-01-08 13:41:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 13:41:29] HOME_URL="https://www.centos.org/"
[2026-01-08 13:41:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 13:41:29] 
[2026-01-08 13:41:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 13:41:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 13:41:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 13:41:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 13:41:29] 
[2026-01-08 13:41:29] 2026-01-08 18:40:58,194 | INFO     | ***************************************
[2026-01-08 13:41:29] 2026-01-08 18:40:58,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 13:41:29] 2026-01-08 18:40:58,822 | INFO     | sufficient remaining disk space (53777268736 B)
[2026-01-08 13:41:29] 2026-01-08 18:40:58,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 13:41:29] 2026-01-08 18:40:58,822 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 13:41:29] 2026-01-08 18:40:58,822 | INFO     | update_server=False
[2026-01-08 13:41:29] 2026-01-08 18:40:58,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 13:41:29] 2026-01-08 18:40:58,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 13:41:29] 2026-01-08 18:40:58,966 | INFO     | all data control threads have been joined
[2026-01-08 13:41:29] 2026-01-08 18:40:59,313 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 13:41:29] 2026-01-08 18:40:59,313 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 13:41:29] 2026-01-08 18:40:59,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:41:29] 2026-01-08 18:40:59,314 | INFO     | will abort loop
[2026-01-08 13:41:29] 2026-01-08 18:40:59,681 | INFO     | all job control threads have been joined
[2026-01-08 13:41:29] 2026-01-08 18:40:59,833 | INFO     | [job] retrieve thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:40:59,972 | INFO     | [data] control thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 13:41:29] 2026-01-08 18:41:00,116 | INFO     | [job] validate thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,277 | INFO     | [payload] validate_post thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,278 | INFO     | [payload] failed_post thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,295 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,319 | INFO     | [job] job monitor thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,335 | INFO     | all payload control threads have been joined
[2026-01-08 13:41:29] 2026-01-08 18:41:00,618 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,687 | INFO     | [job] control thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,863 | INFO     | [data] copytool_out thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:00,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:01,050 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:01,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:41:29] 2026-01-08 18:41:01,194 | INFO     | [data] copytool_in thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:01,341 | INFO     | [payload] control thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:02,060 | INFO     | [job] queue monitor thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:04,021 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 13:41:29] 2026-01-08 18:41:04,182 | INFO     | [monitor] cgroup control has ended
[2026-01-08 13:41:29] 2026-01-08 18:41:05,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127556319040)>', '<ExcThread(monitor, started 140127183558400)>']
[2026-01-08 13:41:29] 2026-01-08 18:41:10,945 | INFO     | all workflow threads have been joined
[2026-01-08 13:41:29] 2026-01-08 18:41:10,945 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 13:41:29] 2026-01-08 18:41:10,946 | INFO     | traces error code: 0
[2026-01-08 13:41:29] 2026-01-08 18:41:10,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 13:41:29] 2026-01-08 18:41:27,927 | INFO     | PID=297183 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 13:41:29] 2026-01-08 18:41:27,928 | INFO     | .. there are 6 such processes running
[2026-01-08 13:41:29] 2026-01-08 18:41:27,929 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 13:41:29] 2026-01-08 18:41:27,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 13:41:29] 2026-01-08 18:41:27,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 13:41:29] 2026-01-08 18:41:27,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 13:41:29] 2026-01-08 18:41:27,930 | INFO     | [monitor] control thread has ended
[2026-01-08 13:41:29] 2026-01-08 18:41:28,059 [wrapper] ==== pilot stdout END ====
[2026-01-08 13:41:29] 2026-01-08 18:41:28,062 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 13:41:29] 2026-01-08 18:41:28,065 [wrapper] pilotpid: 297183
[2026-01-08 13:41:29] 2026-01-08 18:41:28,069 [wrapper] Pilot exit status: 0
[2026-01-08 13:41:29] 2026-01-08 18:41:28,228 [wrapper] pandaids: 6962321654
[2026-01-08 13:41:29] 2026-01-08 18:41:28,829 [wrapper] cleanup supervisor_pilot 1483911 297184
[2026-01-08 13:41:29] 2026-01-08 18:41:28,866 [wrapper] Test setup, not cleaning
[2026-01-08 13:41:29] 2026-01-08 18:41:28,897 [wrapper] apfmon messages muted
[2026-01-08 13:41:29] 2026-01-08 18:41:28,939 [wrapper] ==== wrapper stdout END ====
[2026-01-08 13:41:29] 2026-01-08 18:41:28,970 [wrapper] ==== wrapper stderr END ====
[2026-01-08 13:41:29]  *** Error codes and diagnostics ***
[2026-01-08 13:41:29]     "exeErrorCode": 0,
[2026-01-08 13:41:29]     "exeErrorDiag": "",
[2026-01-08 13:41:29]     "pilotErrorCode": 0,
[2026-01-08 13:41:29]     "pilotErrorDiag": "",
[2026-01-08 13:41:29]  *** Listing of results directory ***
[2026-01-08 13:41:29] total 451684
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 13:41:29] -rwx------. 1 boincer umatlas     36322 Jan  7 16:06 runpilot2-wrapper.sh
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:11 queuedata.json
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 13:41:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:03 run_atlas
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:03 job.xml
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas 224714756 Jan  8 00:03 EVNT.47898824._000693.pool.root.1
[2026-01-08 13:41:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:03 shared
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 00:03 input.tar.gz
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:03 boinc_lockfile
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 00:03 pandaJob.out
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas        57 Jan  8 00:03 setup.sh.local
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas    989835 Jan  8 00:04 agis_schedconf.cvmfs.json
[2026-01-08 13:41:29] drwx------. 5 boincer umatlas      4096 Jan  8 00:04 pilot3
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas 219987986 Jan  8 13:39 HITS.47898826._014855.pool.root.1
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas       531 Jan  8 13:39 boinc_task_state.xml
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas      6658 Jan  8 13:40 init_data.xml
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas      1040 Jan  8 13:40 memory_monitor_summary.json
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas   1516240 Jan  8 13:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas    955611 Jan  8 13:40 log.47898826._014855.job.log.tgz.1
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 13:40 boinc_mmap_file
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas        28 Jan  8 13:40 wrapper_checkpoint.txt
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas      7824 Jan  8 13:40 heartbeat.json
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas        95 Jan  8 13:41 pilot_heartbeat.json
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas       821 Jan  8 13:41 pilotlog.txt
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas   5994784 Jan  8 13:41 log.47898826._014855.job.log.1
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas       357 Jan  8 13:41 output.list
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas       620 Jan  8 13:41 runtime_log
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas   6973440 Jan  8 13:41 result.tar.gz
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas      9345 Jan  8 13:41 runtime_log.err
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas       658 Jan  8 13:41 CPHNDmJupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2rdKDmLwaq0m.diag
[2026-01-08 13:41:29] -rw-r--r--. 1 boincer umatlas     21481 Jan  8 13:41 stderr.txt
[2026-01-08 13:41:29] HITS file was successfully produced:
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas 219987986 Jan  8 13:39 shared/HITS.pool.root.1
[2026-01-08 13:41:29]  *** Contents of shared directory: ***
[2026-01-08 13:41:29] total 441700
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas 224714756 Jan  8 00:03 ATLAS.root_0
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 00:03 input.tar.gz
[2026-01-08 13:41:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas 219987986 Jan  8 13:39 HITS.pool.root.1
[2026-01-08 13:41:29] -rw-------. 1 boincer umatlas   6973440 Jan  8 13:41 result.tar.gz
13:41:31 (291806): run_atlas exited; CPU time 73370.736239
13:41:31 (291806): called boinc_finish(0)

</stderr_txt>
]]>

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