Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:03:56 (1951850): wrapper (7.7.26015): starting
13:03:56 (1951850): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 13:03:56] Arguments: --nthreads 4
[2026-01-08 13:03:56] Threads: 4
[2026-01-08 13:03:56] Checking for CVMFS
[2026-01-08 13:03:56] No cvmfs_config command found, will try listing directly
[2026-01-08 13:03:56] CVMFS is ok
[2026-01-08 13:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:03:56] Further information can be found at the LHC@home message board.
[2026-01-08 13:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:03:56] Checking for apptainer binary...
[2026-01-08 13:03:56] which: no apptainer in ((null))
[2026-01-08 13:03:56] apptainer is not installed, using version from CVMFS
[2026-01-08 13:03:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:03:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-08 13:03:56] apptainer works
[2026-01-08 13:03:56] Set ATHENA_PROC_NUMBER=4
[2026-01-08 13:03:56] Set ATHENA_CORE_NUMBER=4
[2026-01-08 13:03:56] Starting ATLAS job with PandaID=6962319788
[2026-01-08 13:03:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:38:58 (2116973): wrapper (7.7.26015): starting
14:38:58 (2116973): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 14:38:58] Arguments: --nthreads 4
[2026-01-08 14:38:58] Threads: 4
[2026-01-08 14:38:58] This job has been restarted, cleaning up previous attempt
[2026-01-08 14:38:59] Checking for CVMFS
[2026-01-08 14:38:59] No cvmfs_config command found, will try listing directly
[2026-01-08 14:38:59] CVMFS is ok
[2026-01-08 14:38:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:38:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:38:59] Further information can be found at the LHC@home message board.
[2026-01-08 14:38:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:38:59] Checking for apptainer binary...
[2026-01-08 14:38:59] which: no apptainer in ((null))
[2026-01-08 14:38:59] apptainer is not installed, using version from CVMFS
[2026-01-08 14:38:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:38:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-08 14:38:59] apptainer works
[2026-01-08 14:38:59] Set ATHENA_PROC_NUMBER=4
[2026-01-08 14:38:59] Set ATHENA_CORE_NUMBER=4
[2026-01-08 14:38:59] Starting ATLAS job with PandaID=6962319788
[2026-01-08 14:38:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:43:50]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:43:50] 2026-01-08 17:41:32,433 | INFO     | .. there are 5 such processes running
[2026-01-08 18:43:50] 2026-01-08 17:41:32,491 | WARNING  | process 2128338 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 18:43:50] 2026-01-08 17:41:32,492 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962319788/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,001 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:43:50] 2026-01-08 17:41:33,077 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2625.5252734375003
[2026-01-08 18:43:50] 2026-01-08 17:41:33,111 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962319788/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,112 | INFO     | extracted standard info from prmon json
[2026-01-08 18:43:50] 2026-01-08 17:41:33,112 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:43:50] 2026-01-08 17:41:33,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:43:50] 2026-01-08 17:41:33,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:43:50] 2026-01-08 17:41:33,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:43:50] 2026-01-08 17:41:33,118 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:43:50] 2026-01-08 17:41:33,119 | INFO     | sum of square deviations: 4180243959.5
[2026-01-08 18:43:50] 2026-01-08 17:41:33,121 | INFO     | sum of deviations: -33854272269.999992
[2026-01-08 18:43:50] 2026-01-08 17:41:33,121 | INFO     | mean x: 1767886815.5
[2026-01-08 18:43:50] 2026-01-08 17:41:33,121 | INFO     | mean y: 2372003.680672269
[2026-01-08 18:43:50] 2026-01-08 17:41:33,121 | INFO     | intersect: 14319842987.273453
[2026-01-08 18:43:50] 2026-01-08 17:41:33,122 | INFO     | chi2: 1.654348239311827
[2026-01-08 18:43:50] 2026-01-08 17:41:33,122 | INFO     | sum of square deviations: 3922276332.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,124 | INFO     | sum of deviations: -33248002908.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,124 | INFO     | mean x: 1767886663.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,124 | INFO     | mean y: 2372362.1330472105
[2026-01-08 18:43:50] 2026-01-08 17:41:33,124 | INFO     | intersect: 14988236675.896654
[2026-01-08 18:43:50] 2026-01-08 17:41:33,125 | INFO     | chi2: 1.6505636717067593
[2026-01-08 18:43:50] 2026-01-08 17:41:33,125 | INFO     | current chi2=1.6505636717067593 (change=0.2287648703662248 %)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,125 | INFO     | right removable region: 232
[2026-01-08 18:43:50] 2026-01-08 17:41:33,125 | INFO     | sum of square deviations: 3922276332.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,127 | INFO     | sum of deviations: -59079786550.99999
[2026-01-08 18:43:50] 2026-01-08 17:41:33,127 | INFO     | mean x: 1767886968.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,127 | INFO     | mean y: 2386704.3090128754
[2026-01-08 18:43:50] 2026-01-08 17:41:33,127 | INFO     | intersect: 26631409209.328823
[2026-01-08 18:43:50] 2026-01-08 17:41:33,128 | INFO     | chi2: 0.40720355585350493
[2026-01-08 18:43:50] 2026-01-08 17:41:33,128 | INFO     | current chi2=0.40720355585350493 (change=75.38586216751482 %)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,128 | INFO     | sum of square deviations: 3675146117.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | sum of deviations: -53025588065.50001
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | mean x: 1767887120.5
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | mean y: 2382955.6184210526
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | intersect: 25509737279.385563
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | chi2: 0.40162638691518276
[2026-01-08 18:43:50] 2026-01-08 17:41:33,130 | INFO     | current chi2=0.40162638691518276 (change=1.3696267771120838 %)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,131 | INFO     | left removable region: 20
[2026-01-08 18:43:50] 2026-01-08 17:41:33,131 | INFO     | sum of square deviations: 2954447953.0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,132 | INFO     | sum of deviations: -31162329124.499992
[2026-01-08 18:43:50] 2026-01-08 17:41:33,133 | INFO     | mean x: 1767887242.5
[2026-01-08 18:43:50] 2026-01-08 17:41:33,133 | INFO     | mean y: 2369203.797169811
[2026-01-08 18:43:50] 2026-01-08 17:41:33,133 | INFO     | intersect: 18649333029.932213
[2026-01-08 18:43:50] 2026-01-08 17:41:33,133 | INFO     | chi2: 0.30772995895433986
[2026-01-08 18:43:50] 2026-01-08 17:41:33,134 | INFO     | current memory leak: -10.55 B/s (using 212 data points, chi2=0.31)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | could have reported an average CPU frequency of 2635 MHz (12 samples)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | ..............................
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . Timing measurements:
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . get job = 0 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . initial setup = 1 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . payload setup = 8 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . stage-in = 0 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . payload execution = 14500 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,135 | INFO     | . stage-out = 1 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,136 | INFO     | . log creation = 0 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,136 | INFO     | ..............................
[2026-01-08 18:43:50] 2026-01-08 17:41:33,239 | INFO     | 
[2026-01-08 18:43:50] 2026-01-08 17:41:33,240 | INFO     | job summary report
[2026-01-08 18:43:50] 2026-01-08 17:41:33,240 | INFO     | --------------------------------------------------
[2026-01-08 18:43:50] 2026-01-08 17:41:33,240 | INFO     | PanDA job id: 6962319788
[2026-01-08 18:43:50] 2026-01-08 17:41:33,240 | INFO     | task id: 47898826
[2026-01-08 18:43:50] 2026-01-08 17:41:33,241 | INFO     | errors: (none)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,241 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:43:50] 2026-01-08 17:41:33,241 | INFO     | pilot state: finished 
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | transexitcode: 0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | exeerrorcode: 0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | exeerrordiag: 
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | exitcode: 0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | exitmsg: OK
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | cpuconsumptiontime: 55420 s
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | nevents: 400
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | neventsw: 0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,244 | INFO     | pid: 2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | pgrp: 2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | corecount: 4
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | event service: False
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | sizes: {0: 2283981, 7: 2284243, 11: 2284271, 14513: 2315601, 14514: 2324623, 14515: 2324679, 14522: 2325001}
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | --------------------------------------------------
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | 
[2026-01-08 18:43:50] 2026-01-08 17:41:33,245 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-08 18:43:50] 2026-01-08 17:41:33,277 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,277 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | job 6962319788 has completed (purged errors)
[2026-01-08 18:43:50] 2026-01-08 17:41:33,279 | INFO     | overall cleanup function is called
[2026-01-08 18:43:50] 2026-01-08 17:41:33,507 | INFO     | number of running child processes to parent process 2128338: 1
[2026-01-08 18:43:50] 2026-01-08 17:41:33,507 | INFO     | maximum number of monitored processes: 6
[2026-01-08 18:43:50] 2026-01-08 17:41:33,507 | INFO     | aborting job monitoring since job object (job id=6962319788) has expired
[2026-01-08 18:43:50] 2026-01-08 17:41:34,290 | INFO     | --- collectZombieJob: --- 10, [2128338]
[2026-01-08 18:43:50] 2026-01-08 17:41:34,290 | INFO     | zombie collector waiting for pid 2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:34,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:43:50] 2026-01-08 17:41:34,290 | INFO     | collected zombie processes
[2026-01-08 18:43:50] 2026-01-08 17:41:34,291 | INFO     | will attempt to kill all subprocesses of pid=2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:35,067 | INFO     | process IDs to be killed: [2128338] (in reverse order)
[2026-01-08 18:43:50] 2026-01-08 17:41:35,318 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:43:50] 2026-01-08 17:41:35,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:43:50] 2026-01-08 17:41:35,352 | INFO     | did not find any defunct processes belonging to 2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:35,384 | INFO     | did not find any defunct processes belonging to 2128338
[2026-01-08 18:43:50] 2026-01-08 17:41:35,385 | INFO     | ready for new job
[2026-01-08 18:43:50] 2026-01-08 17:41:35,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:43:50] 2026-01-08 17:41:35,388 | INFO     | ***************************************
[2026-01-08 18:43:50] 2026-01-08 17:41:35,388 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:43:50] 2026-01-08 17:41:35,388 | INFO     | ***************************************
[2026-01-08 18:43:50] 2026-01-08 17:41:35,388 | INFO     | 
[2026-01-08 18:43:50] 2026-01-08 17:41:35,397 | INFO     | architecture information:
[2026-01-08 18:43:50] 2026-01-08 17:41:35,398 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:43:50] 2026-01-08 17:41:35,422 | INFO     | cat /etc/os-release:
[2026-01-08 18:43:50] NAME="CentOS Linux"
[2026-01-08 18:43:50] VERSION="7 (Core)"
[2026-01-08 18:43:50] ID="centos"
[2026-01-08 18:43:50] ID_LIKE="rhel fedora"
[2026-01-08 18:43:50] VERSION_ID="7"
[2026-01-08 18:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:43:50] ANSI_COLOR="0;31"
[2026-01-08 18:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:43:50] HOME_URL="https://www.centos.org/"
[2026-01-08 18:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:43:50] 
[2026-01-08 18:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:43:50] 
[2026-01-08 18:43:50] 2026-01-08 17:41:35,422 | INFO     | ***************************************
[2026-01-08 18:43:50] 2026-01-08 17:41:35,925 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-08 18:43:50] 2026-01-08 17:41:35,948 | INFO     | sufficient remaining disk space (3328910032896 B)
[2026-01-08 18:43:50] 2026-01-08 17:41:35,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:43:50] 2026-01-08 17:41:35,949 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:43:50] 2026-01-08 17:41:35,949 | INFO     | update_server=False
[2026-01-08 18:43:50] 2026-01-08 17:41:35,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:43:50] 2026-01-08 17:41:35,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:43:50] 2026-01-08 17:41:36,011 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 18:43:50] 2026-01-08 17:41:36,011 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 18:43:50] 2026-01-08 17:41:36,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:43:50] 2026-01-08 17:41:36,011 | INFO     | will abort loop
[2026-01-08 18:43:50] 2026-01-08 17:41:36,653 | INFO     | all job control threads have been joined
[2026-01-08 18:43:50] 2026-01-08 17:41:36,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:43:50] 2026-01-08 17:41:36,842 | INFO     | all data control threads have been joined
[2026-01-08 18:43:50] 2026-01-08 17:41:36,937 | INFO     | all payload control threads have been joined
[2026-01-08 18:43:50] 2026-01-08 17:41:36,954 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:36,957 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,017 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,659 | INFO     | [job] control thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,747 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,761 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,790 | INFO     | [job] validate thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,847 | INFO     | [data] control thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,944 | INFO     | [payload] control thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:37,956 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:38,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:43:50] 2026-01-08 17:41:38,299 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:38,305 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:38,346 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:39,255 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:40,724 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:41:46,500 | INFO     | job.realtimelogging is not enabled
[2026-01-08 18:43:50] 2026-01-08 17:41:47,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:43:50] 2026-01-08 17:42:05,445 | INFO     | PID=2121021 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-08 18:43:50] 2026-01-08 17:42:05,445 | INFO     | .. there are 5 such processes running
[2026-01-08 18:43:50] 2026-01-08 17:42:05,446 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:43:50] 2026-01-08 17:42:05,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:43:50] 2026-01-08 17:42:05,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:43:50] 2026-01-08 17:42:35,681 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:43:50] 2026-01-08 17:42:37,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23446009460544)>', '<ExcThread(monitor, started 23445769246464)>']
[2026-01-08 18:43:50] 2026-01-08 17:42:37,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:43:50] 2026-01-08 17:42:37,592 | INFO     | [monitor] control thread has ended
[2026-01-08 18:43:50] 2026-01-08 17:42:42,281 | INFO     | all workflow threads have been joined
[2026-01-08 18:43:50] 2026-01-08 17:42:42,281 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:43:50] 2026-01-08 17:42:42,281 | INFO     | traces error code: 0
[2026-01-08 18:43:50] 2026-01-08 17:42:42,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:43:50] 2026-01-08 17:42:42,438 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:43:50] 2026-01-08 17:42:42,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:43:50] 2026-01-08 17:42:42,443 [wrapper] pilotpid: 2121021
[2026-01-08 18:43:50] 2026-01-08 17:42:42,446 [wrapper] Pilot exit status: 0
[2026-01-08 18:43:50] 2026-01-08 17:42:42,460 [wrapper] pandaids: 6962319788 6962319788
[2026-01-08 18:43:50] 2026-01-08 17:42:42,625 [wrapper] cleanup supervisor_pilot 2430013 2121022
[2026-01-08 18:43:50] 2026-01-08 17:42:42,628 [wrapper] Test setup, not cleaning
[2026-01-08 18:43:50] 2026-01-08 17:42:42,631 [wrapper] apfmon messages muted
[2026-01-08 18:43:50] 2026-01-08 17:42:42,634 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:43:50] 2026-01-08 17:42:42,636 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:43:50]  *** Error codes and diagnostics ***
[2026-01-08 18:43:50]     "exeErrorCode": 0,
[2026-01-08 18:43:50]     "exeErrorDiag": "",
[2026-01-08 18:43:50]     "pilotErrorCode": 0,
[2026-01-08 18:43:50]     "pilotErrorDiag": "",
[2026-01-08 18:43:50]  *** Listing of results directory ***
[2026-01-08 18:43:50] total 663840
[2026-01-08 18:43:50] drwx------ 5 boinc boinc      4096 Dec  3 15:30 pilot3
[2026-01-08 18:43:50] -rwx------ 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc       100 Jan  8 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:43:50] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 13:03 run_atlas
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc       105 Jan  8 13:03 job.xml
[2026-01-08 18:43:50] -rw-r--r-- 3 boinc boinc 222992138 Jan  8 13:03 EVNT.47898824._000592.pool.root.1
[2026-01-08 18:43:50] -rw-r--r-- 3 boinc boinc 222992138 Jan  8 13:03 ATLAS.root_0
[2026-01-08 18:43:50] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:03 start_atlas.sh
[2026-01-08 18:43:50] drwxrwx--x 2 boinc boinc      4096 Jan  8 13:03 shared
[2026-01-08 18:43:50] -rw-r--r-- 2 boinc boinc    592393 Jan  8 13:03 input.tar.gz
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc         0 Jan  8 13:03 boinc_lockfile
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc      6697 Jan  8 14:38 init_data.xml
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc      2519 Jan  8 14:38 pandaJob.out
[2026-01-08 18:43:50] -rw------- 1 boinc boinc    989835 Jan  8 14:39 agis_schedconf.cvmfs.json
[2026-01-08 18:43:50] -rw------- 1 boinc boinc 224997014 Jan  8 18:40 HITS.47898826._013665.pool.root.1
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc       528 Jan  8 18:40 boinc_task_state.xml
[2026-01-08 18:43:50] -rw------- 1 boinc boinc      1027 Jan  8 18:41 memory_monitor_summary.json
[2026-01-08 18:43:50] -rw------- 1 boinc boinc   1516240 Jan  8 18:41 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:43:50] -rw------- 1 boinc boinc    420049 Jan  8 18:41 log.47898826._013665.job.log.tgz.1
[2026-01-08 18:43:50] -rw------- 1 boinc boinc      7801 Jan  8 18:41 heartbeat.json
[2026-01-08 18:43:50] -rw------- 1 boinc boinc        97 Jan  8 18:42 pilot_heartbeat.json
[2026-01-08 18:43:50] -rw------- 1 boinc boinc      5094 Jan  8 18:42 pilotlog.txt
[2026-01-08 18:43:50] -rw------- 1 boinc boinc   2013580 Jan  8 18:42 log.47898826._013665.job.log.1
[2026-01-08 18:43:50] -rw------- 1 boinc boinc       357 Jan  8 18:42 output.list
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc       620 Jan  8 18:42 runtime_log
[2026-01-08 18:43:50] -rw------- 1 boinc boinc   2457600 Jan  8 18:42 result.tar.gz
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc      9300 Jan  8 18:42 runtime_log.err
[2026-01-08 18:43:50] -rw------- 1 boinc boinc       792 Jan  8 18:42 QZxKDmjopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwxiKDmrmX3An.diag
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc        26 Jan  8 18:43 wrapper_checkpoint.txt
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc      8192 Jan  8 18:43 boinc_mmap_file
[2026-01-08 18:43:50] -rw-r--r-- 1 boinc boinc     23008 Jan  8 18:43 stderr.txt
[2026-01-08 18:43:50] HITS file was successfully produced:
[2026-01-08 18:43:50] -rw------- 1 boinc boinc 224997014 Jan  8 18:40 shared/HITS.pool.root.1
[2026-01-08 18:43:50]  *** Contents of shared directory: ***
[2026-01-08 18:43:50] total 440496
[2026-01-08 18:43:50] -rw-r--r-- 3 boinc boinc 222992138 Jan  8 13:03 ATLAS.root_0
[2026-01-08 18:43:50] -rw-r--r-- 2 boinc boinc     15847 Jan  8 13:03 start_atlas.sh
[2026-01-08 18:43:50] -rw-r--r-- 2 boinc boinc    592393 Jan  8 13:03 input.tar.gz
[2026-01-08 18:43:50] -rw------- 1 boinc boinc 224997014 Jan  8 18:40 HITS.pool.root.1
[2026-01-08 18:43:50] -rw------- 1 boinc boinc   2457600 Jan  8 18:42 result.tar.gz
18:43:51 (2116973): run_atlas exited; CPU time 56469.985751
18:43:51 (2116973): called boinc_finish(0)

</stderr_txt>
]]>

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