Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:05 (24351): wrapper (7.7.26015): starting
18:50:05 (24351): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 18:50:05] Arguments: --nthreads 8
[2026-01-07 18:50:05] Threads: 8
[2026-01-07 18:50:05] Checking for CVMFS
[2026-01-07 18:50:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 18:50:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 18:50:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 18:50:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 18:50:05] 2.11.2.0 2919 115630 113696 154884 1 59 11530819 20275201 1 130560 0 24385668 99.781 7526722 31111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 18:50:05] CVMFS is ok
[2026-01-07 18:50:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 18:50:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 18:50:05] Further information can be found at the LHC@home message board.
[2026-01-07 18:50:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 18:50:05] Checking for apptainer binary...
[2026-01-07 18:50:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 18:50:05] Running /usr/bin/apptainer --version
[2026-01-07 18:50:05] apptainer version 1.3.2-1.el7
[2026-01-07 18:50:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 18:50:07] c-204-17.aglt2.org
[2026-01-07 18:50:07] apptainer works
[2026-01-07 18:50:07] Set ATHENA_PROC_NUMBER=8
[2026-01-07 18:50:07] Set ATHENA_CORE_NUMBER=8
[2026-01-07 18:50:07] Starting ATLAS job with PandaID=6962319648
[2026-01-07 18:50:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 21:44:00]  *** The last 200 lines of the pilot log: ***
[2026-01-07 21:44:00] 2026-01-08 02:43:21,057 | INFO     | time since job start (10377s) is within the limit (174528.0s)
[2026-01-07 21:44:00] 2026-01-08 02:43:23,058 | INFO     | time since job start (10379s) is within the limit (174528.0s)
[2026-01-07 21:44:00] 2026-01-08 02:43:23,350 | INFO     | monitor loop #761: job 0:6962319648 is in state 'finished'
[2026-01-07 21:44:00] 2026-01-08 02:43:23,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-07 21:44:00] 2026-01-08 02:43:24,189 | INFO     | PID=28702 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 21:44:00] 2026-01-08 02:43:25,189 | INFO     | time since job start (10381s) is within the limit (174528.0s)
[2026-01-07 21:44:00] 2026-01-08 02:43:25,853 | INFO     | monitor loop #762: job 0:6962319648 is in state 'finished'
[2026-01-07 21:44:00] 2026-01-08 02:43:25,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-07 21:44:00] 2026-01-08 02:43:27,195 | INFO     | time since job start (10383s) is within the limit (174528.0s)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,051 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-07 21:44:00] 2026-01-08 02:43:28,055 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-07 21:44:00] 2026-01-08 02:43:28,057 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962319648/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,057 | INFO     | extracted standard info from prmon json
[2026-01-07 21:44:00] 2026-01-08 02:43:28,058 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 21:44:00] 2026-01-08 02:43:28,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 21:44:00] 2026-01-08 02:43:28,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 21:44:00] 2026-01-08 02:43:28,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 21:44:00] 2026-01-08 02:43:28,063 | INFO     | fitting pss+swap vs Time
[2026-01-07 21:44:00] 2026-01-08 02:43:28,063 | INFO     | sum of square deviations: 1523386702.5
[2026-01-07 21:44:00] 2026-01-08 02:43:28,064 | INFO     | sum of deviations: 18433994857.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,064 | INFO     | mean x: 1767835009.5
[2026-01-07 21:44:00] 2026-01-08 02:43:28,064 | INFO     | mean y: 2489595.964705882
[2026-01-07 21:44:00] 2026-01-08 02:43:28,064 | INFO     | intersect: -21389492767.84849
[2026-01-07 21:44:00] 2026-01-08 02:43:28,065 | INFO     | chi2: 1.4527322216597733
[2026-01-07 21:44:00] 2026-01-08 02:43:28,065 | INFO     | sum of square deviations: 1392881930.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,066 | INFO     | sum of deviations: 17618054160.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,066 | INFO     | mean x: 1767834857.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,066 | INFO     | mean y: 2488646.933333333
[2026-01-07 21:44:00] 2026-01-08 02:43:28,066 | INFO     | intersect: -22358207967.575733
[2026-01-07 21:44:00] 2026-01-08 02:43:28,067 | INFO     | chi2: 1.4538315987561419
[2026-01-07 21:44:00] 2026-01-08 02:43:28,067 | INFO     | current chi2=1.4538315987561419 (change=-0.07567651353616141 %)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,067 | INFO     | right removable region: 164
[2026-01-07 21:44:00] 2026-01-08 02:43:28,067 | INFO     | sum of square deviations: 1392881930.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,068 | INFO     | sum of deviations: -5249036397.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,068 | INFO     | mean x: 1767835162.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,068 | INFO     | mean y: 2516868.0303030303
[2026-01-07 21:44:00] 2026-01-08 02:43:28,068 | INFO     | intersect: 6664553979.269438
[2026-01-07 21:44:00] 2026-01-08 02:43:28,069 | INFO     | chi2: 0.11495443446761267
[2026-01-07 21:44:00] 2026-01-08 02:43:28,069 | INFO     | current chi2=0.11495443446761267 (change=92.0870183263179 %)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,069 | INFO     | sum of square deviations: 1270051720.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,070 | INFO     | sum of deviations: -7652470587.500001
[2026-01-07 21:44:00] 2026-01-08 02:43:28,070 | INFO     | mean x: 1767835314.5
[2026-01-07 21:44:00] 2026-01-08 02:43:28,070 | INFO     | mean y: 2519851.18125
[2026-01-07 21:44:00] 2026-01-08 02:43:28,070 | INFO     | intersect: 10654296888.855797
[2026-01-07 21:44:00] 2026-01-08 02:43:28,071 | INFO     | chi2: 0.1026123934014405
[2026-01-07 21:44:00] 2026-01-08 02:43:28,071 | INFO     | current chi2=0.1026123934014405 (change=10.736463646080063 %)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,071 | INFO     | left removable region: 20
[2026-01-07 21:44:00] 2026-01-08 02:43:28,071 | INFO     | sum of square deviations: 925859220.0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,072 | INFO     | sum of deviations: -1451810064.9999998
[2026-01-07 21:44:00] 2026-01-08 02:43:28,072 | INFO     | mean x: 1767835436.5
[2026-01-07 21:44:00] 2026-01-08 02:43:28,072 | INFO     | mean y: 2510416.7916666665
[2026-01-07 21:44:00] 2026-01-08 02:43:28,072 | INFO     | intersect: 2774596306.8845124
[2026-01-07 21:44:00] 2026-01-08 02:43:28,072 | INFO     | chi2: 0.057679108441523366
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | current memory leak: -1.57 B/s (using 144 data points, chi2=0.06)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | ..............................
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | . Timing measurements:
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | . get job = 0 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,073 | INFO     | . initial setup = 2 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | . payload setup = 8 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | . stage-in = 0 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | . payload execution = 10345 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | . stage-out = 0 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | . log creation = 0 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,074 | INFO     | ..............................
[2026-01-07 21:44:00] 2026-01-08 02:43:28,165 | INFO     | 
[2026-01-07 21:44:00] 2026-01-08 02:43:28,165 | INFO     | job summary report
[2026-01-07 21:44:00] 2026-01-08 02:43:28,165 | INFO     | --------------------------------------------------
[2026-01-07 21:44:00] 2026-01-08 02:43:28,165 | INFO     | PanDA job id: 6962319648
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | task id: 47898826
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | errors: (none)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | pilot state: finished 
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | transexitcode: 0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | exeerrorcode: 0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | exeerrordiag: 
[2026-01-07 21:44:00] 2026-01-08 02:43:28,166 | INFO     | exitcode: 0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | exitmsg: OK
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | cpuconsumptiontime: 76205 s
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | nevents: 400
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | neventsw: 0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | pid: 2787
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | pgrp: 2787
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | corecount: 8
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | event service: False
[2026-01-07 21:44:00] 2026-01-08 02:43:28,167 | INFO     | sizes: {0: 2283969, 6: 2284231, 11: 2284259, 10356: 2312931, 10357: 2312930, 10359: 2322196, 10366: 2322398}
[2026-01-07 21:44:00] 2026-01-08 02:43:28,168 | INFO     | --------------------------------------------------
[2026-01-07 21:44:00] 2026-01-08 02:43:28,168 | INFO     | 
[2026-01-07 21:44:00] 2026-01-08 02:43:28,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-07 21:44:00] 2026-01-08 02:43:28,195 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,196 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,196 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,196 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,198 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,199 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 21:44:00] 2026-01-08 02:43:28,199 | INFO     | job 6962319648 has completed (purged errors)
[2026-01-07 21:44:00] 2026-01-08 02:43:28,199 | INFO     | overall cleanup function is called
[2026-01-07 21:44:00] 2026-01-08 02:43:29,207 | INFO     | --- collectZombieJob: --- 10, [2787]
[2026-01-07 21:44:00] 2026-01-08 02:43:29,208 | INFO     | zombie collector waiting for pid 2787
[2026-01-07 21:44:00] 2026-01-08 02:43:29,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 21:44:00] 2026-01-08 02:43:29,208 | INFO     | collected zombie processes
[2026-01-07 21:44:00] 2026-01-08 02:43:29,208 | INFO     | will attempt to kill all subprocesses of pid=2787
[2026-01-07 21:44:00] 2026-01-08 02:43:29,297 | INFO     | process IDs to be killed: [2787] (in reverse order)
[2026-01-07 21:44:00] 2026-01-08 02:43:29,354 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 21:44:00] 2026-01-08 02:43:29,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 21:44:00] 2026-01-08 02:43:29,359 | INFO     | did not find any defunct processes belonging to 2787
[2026-01-07 21:44:00] 2026-01-08 02:43:29,363 | INFO     | did not find any defunct processes belonging to 2787
[2026-01-07 21:44:00] 2026-01-08 02:43:29,363 | INFO     | ready for new job
[2026-01-07 21:44:00] 2026-01-08 02:43:29,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 21:44:00] 2026-01-08 02:43:29,365 | INFO     | ***************************************
[2026-01-07 21:44:00] 2026-01-08 02:43:29,365 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 21:44:00] 2026-01-08 02:43:29,365 | INFO     | ***************************************
[2026-01-07 21:44:00] 2026-01-08 02:43:29,365 | INFO     | 
[2026-01-07 21:44:00] 2026-01-08 02:43:29,365 | INFO     | architecture information:
[2026-01-07 21:44:00] 2026-01-08 02:43:29,366 | INFO     | executing command: cat /etc/os-release
[2026-01-07 21:44:00] 2026-01-08 02:43:29,384 | INFO     | cat /etc/os-release:
[2026-01-07 21:44:00] NAME="CentOS Linux"
[2026-01-07 21:44:00] VERSION="7 (Core)"
[2026-01-07 21:44:00] ID="centos"
[2026-01-07 21:44:00] ID_LIKE="rhel fedora"
[2026-01-07 21:44:00] VERSION_ID="7"
[2026-01-07 21:44:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 21:44:00] ANSI_COLOR="0;31"
[2026-01-07 21:44:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 21:44:00] HOME_URL="https://www.centos.org/"
[2026-01-07 21:44:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 21:44:00] 
[2026-01-07 21:44:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 21:44:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 21:44:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 21:44:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 21:44:00] 
[2026-01-07 21:44:00] 2026-01-08 02:43:29,384 | INFO     | ***************************************
[2026-01-07 21:44:00] 2026-01-08 02:43:29,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-07 21:44:00] 2026-01-08 02:43:29,908 | INFO     | sufficient remaining disk space (18498977792 B)
[2026-01-07 21:44:00] 2026-01-08 02:43:29,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 21:44:00] 2026-01-08 02:43:29,909 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 21:44:00] 2026-01-08 02:43:29,909 | INFO     | update_server=False
[2026-01-07 21:44:00] 2026-01-08 02:43:29,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 21:44:00] 2026-01-08 02:43:29,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 21:44:00] 2026-01-08 02:43:29,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 21:44:00] 2026-01-08 02:43:29,910 | INFO     | aborting loop
[2026-01-07 21:44:00] 2026-01-08 02:43:30,033 | INFO     | all data control threads have been joined
[2026-01-07 21:44:00] 2026-01-08 02:43:30,911 | INFO     | [job] job monitor thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:30,915 | INFO     | [job] retrieve thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:30,916 | INFO     | [job] queue monitor thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:30,919 | INFO     | [job] validate thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,038 | INFO     | [data] control thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 21:44:00] 2026-01-08 02:43:31,180 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,191 | INFO     | [payload] failed_post thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,194 | INFO     | all payload control threads have been joined
[2026-01-07 21:44:00] 2026-01-08 02:43:31,258 | INFO     | [data] copytool_in thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,265 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 21:44:00] 2026-01-08 02:43:31,424 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:31,598 | INFO     | all job control threads have been joined
[2026-01-07 21:44:00] 2026-01-08 02:43:32,200 | INFO     | [payload] control thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:32,493 | INFO     | [payload] validate_post thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:32,604 | INFO     | [job] control thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:33,076 | INFO     | [data] copytool_out thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:35,308 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:40,518 | INFO     | job.realtimelogging is not enabled
[2026-01-07 21:44:00] 2026-01-08 02:43:40,654 | INFO     | [monitor] cgroup control has ended
[2026-01-07 21:44:00] 2026-01-08 02:43:41,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 21:44:00] 2026-01-08 02:43:42,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930364811072)>', '<ExcThread(monitor, started 139929405343488)>']
[2026-01-07 21:44:00] 2026-01-08 02:43:47,582 | INFO     | all workflow threads have been joined
[2026-01-07 21:44:00] 2026-01-08 02:43:47,582 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 21:44:00] 2026-01-08 02:43:47,583 | INFO     | traces error code: 0
[2026-01-07 21:44:00] 2026-01-08 02:43:47,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 21:44:00] 2026-01-08 02:44:00,401 | INFO     | PID=28702 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 21:44:00] 2026-01-08 02:44:00,402 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 21:44:00] 2026-01-08 02:44:00,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 21:44:00] 2026-01-08 02:44:00,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 21:44:00] 2026-01-08 02:44:00,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 21:44:00] 2026-01-08 02:44:00,403 | INFO     | [monitor] control thread has ended
[2026-01-07 21:44:00] 2026-01-08 02:44:00,510 [wrapper] ==== pilot stdout END ====
[2026-01-07 21:44:00] 2026-01-08 02:44:00,514 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 21:44:00] 2026-01-08 02:44:00,519 [wrapper] pilotpid: 28702
[2026-01-07 21:44:00] 2026-01-08 02:44:00,523 [wrapper] Pilot exit status: 0
[2026-01-07 21:44:00] 2026-01-08 02:44:00,542 [wrapper] pandaids: 6962319648
[2026-01-07 21:44:00] 2026-01-08 02:44:00,586 [wrapper] cleanup supervisor_pilot 11475 28703
[2026-01-07 21:44:00] 2026-01-08 02:44:00,590 [wrapper] Test setup, not cleaning
[2026-01-07 21:44:00] 2026-01-08 02:44:00,594 [wrapper] apfmon messages muted
[2026-01-07 21:44:00] 2026-01-08 02:44:00,599 [wrapper] ==== wrapper stdout END ====
[2026-01-07 21:44:00] 2026-01-08 02:44:00,603 [wrapper] ==== wrapper stderr END ====
[2026-01-07 21:44:00]  *** Error codes and diagnostics ***
[2026-01-07 21:44:00]     "exeErrorCode": 0,
[2026-01-07 21:44:00]     "exeErrorDiag": "",
[2026-01-07 21:44:00]     "pilotErrorCode": 0,
[2026-01-07 21:44:00]     "pilotErrorDiag": "",
[2026-01-07 21:44:00]  *** Listing of results directory ***
[2026-01-07 21:44:00] total 439664
[2026-01-07 21:44:00] -rwx------ 1 boincer umatlas     36322 Jan  7 16:00 runpilot2-wrapper.sh
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 16:05 queuedata.json
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas       100 Jan  7 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 21:44:00] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 18:50 run_atlas
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas       105 Jan  7 18:50 job.xml
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas 226092767 Jan  7 18:50 EVNT.47898824._000587.pool.root.1
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 18:50 start_atlas.sh
[2026-01-07 21:44:00] drwxrwx--x 2 boincer umatlas      4096 Jan  7 18:50 shared
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas    592399 Jan  7 18:50 input.tar.gz
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas         0 Jan  7 18:50 boinc_lockfile
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas      2519 Jan  7 18:50 pandaJob.out
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas        57 Jan  7 18:50 setup.sh.local
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas    989785 Jan  7 18:50 agis_schedconf.cvmfs.json
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas   1516240 Jan  7 18:50 agis_ddmendpoints.agis.ALL.json
[2026-01-07 21:44:00] drwx------ 5 boincer umatlas      4096 Jan  7 18:50 pilot3
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas      5909 Jan  7 21:40 init_data.xml
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas 216525621 Jan  7 21:42 HITS.47898826._013525.pool.root.1
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas       530 Jan  7 21:42 boinc_task_state.xml
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas      1048 Jan  7 21:43 memory_monitor_summary.json
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas    403996 Jan  7 21:43 log.47898826._013525.job.log.tgz.1
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas      7845 Jan  7 21:43 heartbeat.json
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas      8192 Jan  7 21:43 boinc_mmap_file
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas        28 Jan  7 21:43 wrapper_checkpoint.txt
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas        95 Jan  7 21:44 pilot_heartbeat.json
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas       745 Jan  7 21:44 pilotlog.txt
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas   1439494 Jan  7 21:44 log.47898826._013525.job.log.1
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas       357 Jan  7 21:44 output.list
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas       620 Jan  7 21:44 runtime_log
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas   1863680 Jan  7 21:44 result.tar.gz
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas      9343 Jan  7 21:44 runtime_log.err
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas       662 Jan  7 21:44 0ZmKDmjopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmxiKDmLcOcnm.diag
[2026-01-07 21:44:00] -rw-r--r-- 1 boincer umatlas     21357 Jan  7 21:44 stderr.txt
[2026-01-07 21:44:00] HITS file was successfully produced:
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas 216525621 Jan  7 21:42 shared/HITS.pool.root.1
[2026-01-07 21:44:00]  *** Contents of shared directory: ***
[2026-01-07 21:44:00] total 434668
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas 226092767 Jan  7 18:50 ATLAS.root_0
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 18:50 start_atlas.sh
[2026-01-07 21:44:00] -rw-r--r-- 2 boincer umatlas    592399 Jan  7 18:50 input.tar.gz
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas 216525621 Jan  7 21:42 HITS.pool.root.1
[2026-01-07 21:44:00] -rw------- 1 boincer umatlas   1863680 Jan  7 21:44 result.tar.gz
21:44:02 (24351): run_atlas exited; CPU time 76169.638951
21:44:02 (24351): called boinc_finish(0)

</stderr_txt>
]]>

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