Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:01 (3649782): wrapper (7.7.26015): starting
12:34:01 (3649782): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 12:34:01] Arguments: --nthreads 4
[2026-01-11 12:34:01] Threads: 4
[2026-01-11 12:34:01] Checking for CVMFS
[2026-01-11 12:34:01] No cvmfs_config command found, will try listing directly
[2026-01-11 12:34:01] CVMFS is ok
[2026-01-11 12:34:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 12:34:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 12:34:01] Further information can be found at the LHC@home message board.
[2026-01-11 12:34:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 12:34:01] Checking for apptainer binary...
[2026-01-11 12:34:01] which: no apptainer in ((null))
[2026-01-11 12:34:01] apptainer is not installed, using version from CVMFS
[2026-01-11 12:34:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 12:34:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-11 12:34:01] apptainer works
[2026-01-11 12:34:01] Set ATHENA_PROC_NUMBER=4
[2026-01-11 12:34:01] Set ATHENA_CORE_NUMBER=4
[2026-01-11 12:34:01] Starting ATLAS job with PandaID=6962319544
[2026-01-11 12:34:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:25:45]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:25:45] 2026-01-11 15:24:35,255 | INFO     | time since job start (13819s) is within the limit (174528.0s)
[2026-01-11 16:25:45] 2026-01-11 15:24:35,256 | INFO     | 13820s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 16:25:45] 2026-01-11 15:24:37,263 | INFO     | time since job start (13821s) is within the limit (174528.0s)
[2026-01-11 16:25:45] 2026-01-11 15:24:37,382 | INFO     | monitor loop #941: job 0:6962319544 is in state 'finished'
[2026-01-11 16:25:45] 2026-01-11 15:24:37,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:25:45] 2026-01-11 15:24:39,270 | INFO     | time since job start (13823s) is within the limit (174528.0s)
[2026-01-11 16:25:45] 2026-01-11 15:24:39,886 | INFO     | monitor loop #942: job 0:6962319544 is in state 'finished'
[2026-01-11 16:25:45] 2026-01-11 15:24:39,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,338 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 16:25:45] 2026-01-11 15:24:40,357 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2672.105765624999
[2026-01-11 16:25:45] 2026-01-11 15:24:40,381 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962319544/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,382 | INFO     | extracted standard info from prmon json
[2026-01-11 16:25:45] 2026-01-11 15:24:40,382 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:25:45] 2026-01-11 15:24:40,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:25:45] 2026-01-11 15:24:40,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 16:25:45] 2026-01-11 15:24:40,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 16:25:45] 2026-01-11 15:24:40,387 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:25:45] 2026-01-11 15:24:40,387 | INFO     | sum of square deviations: 3579276412.5
[2026-01-11 16:25:45] 2026-01-11 15:24:40,388 | INFO     | sum of deviations: -41606938590.5
[2026-01-11 16:25:45] 2026-01-11 15:24:40,389 | INFO     | mean x: 1768138154.5
[2026-01-11 16:25:45] 2026-01-11 15:24:40,389 | INFO     | mean y: 2368323.384955752
[2026-01-11 16:25:45] 2026-01-11 15:24:40,389 | INFO     | intersect: 20555912429.920624
[2026-01-11 16:25:45] 2026-01-11 15:24:40,389 | INFO     | chi2: 1.6433219827262318
[2026-01-11 16:25:45] 2026-01-11 15:24:40,389 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,391 | INFO     | sum of deviations: -40487479553.00001
[2026-01-11 16:25:45] 2026-01-11 15:24:40,391 | INFO     | mean x: 1768138002.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,391 | INFO     | mean y: 2369058.2488687783
[2026-01-11 16:25:45] 2026-01-11 15:24:40,391 | INFO     | intersect: 21391372342.283573
[2026-01-11 16:25:45] 2026-01-11 15:24:40,392 | INFO     | chi2: 1.6387604617650682
[2026-01-11 16:25:45] 2026-01-11 15:24:40,392 | INFO     | current chi2=1.6387604617650682 (change=0.2775792576933782 %)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,392 | INFO     | right removable region: 220
[2026-01-11 16:25:45] 2026-01-11 15:24:40,392 | INFO     | sum of square deviations: 3346927870.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | sum of deviations: -63804998440.99999
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | mean x: 1768138307.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | mean y: 2382651.6923076925
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | intersect: 33709730495.31565
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | chi2: 0.42204788351521083
[2026-01-11 16:25:45] 2026-01-11 15:24:40,394 | INFO     | current chi2=0.42204788351521083 (change=74.31739561987459 %)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,395 | INFO     | sum of square deviations: 3124858590.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,396 | INFO     | sum of deviations: -53306584260.50001
[2026-01-11 16:25:45] 2026-01-11 15:24:40,396 | INFO     | mean x: 1768138459.5
[2026-01-11 16:25:45] 2026-01-11 15:24:40,396 | INFO     | mean y: 2375438.847222222
[2026-01-11 16:25:45] 2026-01-11 15:24:40,396 | INFO     | intersect: 30164835294.532223
[2026-01-11 16:25:45] 2026-01-11 15:24:40,397 | INFO     | chi2: 0.39377710072003697
[2026-01-11 16:25:45] 2026-01-11 15:24:40,397 | INFO     | current chi2=0.39377710072003697 (change=6.6984775660307205 %)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,397 | INFO     | left removable region: 20
[2026-01-11 16:25:45] 2026-01-11 15:24:40,397 | INFO     | sum of square deviations: 2480604650.0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,398 | INFO     | sum of deviations: -30036566712.999996
[2026-01-11 16:25:45] 2026-01-11 15:24:40,398 | INFO     | mean x: 1768138581.5
[2026-01-11 16:25:45] 2026-01-11 15:24:40,398 | INFO     | mean y: 2359613.86
[2026-01-11 16:25:45] 2026-01-11 15:24:40,399 | INFO     | intersect: 21411983457.40715
[2026-01-11 16:25:45] 2026-01-11 15:24:40,399 | INFO     | chi2: 0.2891322547210623
[2026-01-11 16:25:45] 2026-01-11 15:24:40,399 | INFO     | current memory leak: -12.11 B/s (using 200 data points, chi2=0.29)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,399 | INFO     | could have reported an average CPU frequency of 2670 MHz (11 samples)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,399 | INFO     | ..............................
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . Timing measurements:
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . get job = 0 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . initial setup = 1 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . payload setup = 9 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . stage-in = 0 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . payload execution = 13781 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . stage-out = 1 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | . log creation = 0 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,400 | INFO     | ..............................
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | 
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | job summary report
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | --------------------------------------------------
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | PanDA job id: 6962319544
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | task id: 47898826
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | errors: (none)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | pilot state: finished 
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | transexitcode: 0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,492 | INFO     | exeerrorcode: 0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | exeerrordiag: 
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | exitcode: 0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | exitmsg: OK
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | cpuconsumptiontime: 53176 s
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | nevents: 400
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | neventsw: 0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | pid: 3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | pgrp: 3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | corecount: 4
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | event service: False
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | sizes: {0: 2283981, 7: 2284243, 11: 2284271, 13795: 2315297, 13796: 2324319, 13799: 2324375, 13806: 2324697}
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | --------------------------------------------------
[2026-01-11 16:25:45] 2026-01-11 15:24:40,493 | INFO     | 
[2026-01-11 16:25:45] 2026-01-11 15:24:40,494 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-11 16:25:45] 2026-01-11 15:24:40,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,523 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,523 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,523 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | job 6962319544 has completed (purged errors)
[2026-01-11 16:25:45] 2026-01-11 15:24:40,525 | INFO     | overall cleanup function is called
[2026-01-11 16:25:45] 2026-01-11 15:24:41,534 | INFO     | --- collectZombieJob: --- 10, [3663868]
[2026-01-11 16:25:45] 2026-01-11 15:24:41,534 | INFO     | zombie collector waiting for pid 3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:41,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:25:45] 2026-01-11 15:24:41,534 | INFO     | collected zombie processes
[2026-01-11 16:25:45] 2026-01-11 15:24:41,534 | INFO     | will attempt to kill all subprocesses of pid=3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:42,380 | INFO     | process IDs to be killed: [3663868] (in reverse order)
[2026-01-11 16:25:45] 2026-01-11 15:24:42,664 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:25:45] 2026-01-11 15:24:42,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:25:45] 2026-01-11 15:24:42,702 | INFO     | did not find any defunct processes belonging to 3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:42,737 | INFO     | did not find any defunct processes belonging to 3663868
[2026-01-11 16:25:45] 2026-01-11 15:24:42,737 | INFO     | ready for new job
[2026-01-11 16:25:45] 2026-01-11 15:24:42,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:25:45] 2026-01-11 15:24:42,740 | INFO     | ***************************************
[2026-01-11 16:25:45] 2026-01-11 15:24:42,741 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:25:45] 2026-01-11 15:24:42,741 | INFO     | ***************************************
[2026-01-11 16:25:45] 2026-01-11 15:24:42,741 | INFO     | 
[2026-01-11 16:25:45] 2026-01-11 15:24:42,749 | INFO     | architecture information:
[2026-01-11 16:25:45] 2026-01-11 15:24:42,750 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:25:45] 2026-01-11 15:24:42,776 | INFO     | cat /etc/os-release:
[2026-01-11 16:25:45] NAME="CentOS Linux"
[2026-01-11 16:25:45] VERSION="7 (Core)"
[2026-01-11 16:25:45] ID="centos"
[2026-01-11 16:25:45] ID_LIKE="rhel fedora"
[2026-01-11 16:25:45] VERSION_ID="7"
[2026-01-11 16:25:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:25:45] ANSI_COLOR="0;31"
[2026-01-11 16:25:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:25:45] HOME_URL="https://www.centos.org/"
[2026-01-11 16:25:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:25:45] 
[2026-01-11 16:25:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:25:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:25:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:25:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:25:45] 
[2026-01-11 16:25:45] 2026-01-11 15:24:42,777 | INFO     | ***************************************
[2026-01-11 16:25:45] 2026-01-11 15:24:43,279 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-11 16:25:45] 2026-01-11 15:24:43,307 | INFO     | sufficient remaining disk space (3348087439360 B)
[2026-01-11 16:25:45] 2026-01-11 15:24:43,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:25:45] 2026-01-11 15:24:43,308 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:25:45] 2026-01-11 15:24:43,308 | INFO     | update_server=False
[2026-01-11 16:25:45] 2026-01-11 15:24:43,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:25:45] 2026-01-11 15:24:43,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:25:45] 2026-01-11 15:24:43,395 | INFO     | aborting loop
[2026-01-11 16:25:45] 2026-01-11 15:24:43,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:25:45] 2026-01-11 15:24:44,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:25:45] 2026-01-11 15:24:44,208 | INFO     | all job control threads have been joined
[2026-01-11 16:25:45] 2026-01-11 15:24:44,313 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:44,373 | INFO     | all data control threads have been joined
[2026-01-11 16:25:45] 2026-01-11 15:24:44,394 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:44,400 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:44,475 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:44,644 | INFO     | all payload control threads have been joined
[2026-01-11 16:25:45] 2026-01-11 15:24:44,844 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,213 | INFO     | [job] control thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,323 | INFO     | [job] validate thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,332 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,378 | INFO     | [data] control thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:25:45] 2026-01-11 15:24:45,576 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,649 | INFO     | [payload] control thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,701 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:45,734 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:46,506 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:48,150 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:24:53,816 | INFO     | job.realtimelogging is not enabled
[2026-01-11 16:25:45] 2026-01-11 15:24:54,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:25:45] 2026-01-11 15:25:13,417 | INFO     | PID=3653788 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 16:25:45] 2026-01-11 15:25:13,417 | INFO     | .. there are 9 such processes running
[2026-01-11 16:25:45] 2026-01-11 15:25:13,418 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:25:45] 2026-01-11 15:25:13,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:25:45] 2026-01-11 15:25:13,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:25:45] 2026-01-11 15:25:38,468 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:25:45] 2026-01-11 15:25:40,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22758477522752)>', '<ExcThread(monitor, started 22758241044224)>']
[2026-01-11 16:25:45] 2026-01-11 15:25:40,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:25:45] 2026-01-11 15:25:40,558 | INFO     | [monitor] control thread has ended
[2026-01-11 16:25:45] 2026-01-11 15:25:45,297 | INFO     | all workflow threads have been joined
[2026-01-11 16:25:45] 2026-01-11 15:25:45,297 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:25:45] 2026-01-11 15:25:45,297 | INFO     | traces error code: 0
[2026-01-11 16:25:45] 2026-01-11 15:25:45,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:25:45] 2026-01-11 15:25:45,470 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:25:45] 2026-01-11 15:25:45,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:25:45] 2026-01-11 15:25:45,479 [wrapper] pilotpid: 3653788
[2026-01-11 16:25:45] 2026-01-11 15:25:45,482 [wrapper] Pilot exit status: 0
[2026-01-11 16:25:45] 2026-01-11 15:25:45,497 [wrapper] pandaids: 6962319544
[2026-01-11 16:25:45] 2026-01-11 15:25:45,671 [wrapper] cleanup supervisor_pilot 4090968 3653789
[2026-01-11 16:25:45] 2026-01-11 15:25:45,676 [wrapper] Test setup, not cleaning
[2026-01-11 16:25:45] 2026-01-11 15:25:45,680 [wrapper] apfmon messages muted
[2026-01-11 16:25:45] 2026-01-11 15:25:45,684 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:25:45] 2026-01-11 15:25:45,688 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:25:45]  *** Error codes and diagnostics ***
[2026-01-11 16:25:45]     "exeErrorCode": 0,
[2026-01-11 16:25:45]     "exeErrorDiag": "",
[2026-01-11 16:25:45]     "pilotErrorCode": 0,
[2026-01-11 16:25:45]     "pilotErrorDiag": "",
[2026-01-11 16:25:45]  *** Listing of results directory ***
[2026-01-11 16:25:45] total 433636
[2026-01-11 16:25:45] -rwx------ 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc       100 Jan 11 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:25:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 12:33 run_atlas
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc       105 Jan 11 12:33 job.xml
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc      6692 Jan 11 12:34 init_data.xml
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc 223616210 Jan 11 12:34 EVNT.47898824._000583.pool.root.1
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:34 start_atlas.sh
[2026-01-11 16:25:45] drwxrwx--x 2 boinc boinc      4096 Jan 11 12:34 shared
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc    592398 Jan 11 12:34 input.tar.gz
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc         0 Jan 11 12:34 boinc_lockfile
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc      2519 Jan 11 12:34 pandaJob.out
[2026-01-11 16:25:45] -rw------- 1 boinc boinc    989548 Jan 11 12:34 agis_schedconf.cvmfs.json
[2026-01-11 16:25:45] drwx------ 5 boinc boinc      4096 Jan 11 12:34 pilot3
[2026-01-11 16:25:45] -rw------- 1 boinc boinc 211905617 Jan 11 16:23 HITS.47898826._013421.pool.root.1
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc       528 Jan 11 16:24 boinc_task_state.xml
[2026-01-11 16:25:45] -rw------- 1 boinc boinc      1029 Jan 11 16:24 memory_monitor_summary.json
[2026-01-11 16:25:45] -rw------- 1 boinc boinc   1516240 Jan 11 16:24 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:25:45] -rw------- 1 boinc boinc    388825 Jan 11 16:24 log.47898826._013421.job.log.tgz.1
[2026-01-11 16:25:45] -rw------- 1 boinc boinc      7789 Jan 11 16:24 heartbeat.json
[2026-01-11 16:25:45] -rw------- 1 boinc boinc        95 Jan 11 16:25 pilot_heartbeat.json
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc      8192 Jan 11 16:25 boinc_mmap_file
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc        26 Jan 11 16:25 wrapper_checkpoint.txt
[2026-01-11 16:25:45] -rw------- 1 boinc boinc      4908 Jan 11 16:25 pilotlog.txt
[2026-01-11 16:25:45] -rw------- 1 boinc boinc   1913481 Jan 11 16:25 log.47898826._013421.job.log.1
[2026-01-11 16:25:45] -rw------- 1 boinc boinc       357 Jan 11 16:25 output.list
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc       620 Jan 11 16:25 runtime_log
[2026-01-11 16:25:45] -rw------- 1 boinc boinc   2324480 Jan 11 16:25 result.tar.gz
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc      9223 Jan 11 16:25 runtime_log.err
[2026-01-11 16:25:45] -rw------- 1 boinc boinc       667 Jan 11 16:25 cdcKDmjopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdxiKDmCmypIo.diag
[2026-01-11 16:25:45] -rw-r--r-- 1 boinc boinc     21102 Jan 11 16:25 stderr.txt
[2026-01-11 16:25:45] HITS file was successfully produced:
[2026-01-11 16:25:45] -rw------- 1 boinc boinc 211905617 Jan 11 16:23 shared/HITS.pool.root.1
[2026-01-11 16:25:45]  *** Contents of shared directory: ***
[2026-01-11 16:25:45] total 428192
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc 223616210 Jan 11 12:34 ATLAS.root_0
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:34 start_atlas.sh
[2026-01-11 16:25:45] -rw-r--r-- 2 boinc boinc    592398 Jan 11 12:34 input.tar.gz
[2026-01-11 16:25:45] -rw------- 1 boinc boinc 211905617 Jan 11 16:23 HITS.pool.root.1
[2026-01-11 16:25:45] -rw------- 1 boinc boinc   2324480 Jan 11 16:25 result.tar.gz
16:29:48 (3649782): run_atlas exited; CPU time 54148.621892
16:29:48 (3649782): called boinc_finish(0)

</stderr_txt>
]]>

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