Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:30:39 (22852): wrapper (7.7.26015): starting
06:30:39 (22852): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 06:30:39] Arguments: --nthreads 8
[2026-01-08 06:30:39] Threads: 8
[2026-01-08 06:30:39] Checking for CVMFS
[2026-01-08 06:30:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 06:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 06:30:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 06:30:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 06:30:42] 2.11.2.0 25293 33540 131340 154893 2 60 13004752 25165824 899 130560 0 12626560 99.771 9113861 3589 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 06:30:42] CVMFS is ok
[2026-01-08 06:30:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:30:43] Checking for apptainer binary...
[2026-01-08 06:30:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 06:30:43] Running /usr/bin/apptainer --version
[2026-01-08 06:30:43] apptainer version 1.3.2-1.el7
[2026-01-08 06:30:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:30:51] cg-vwn372.simple-grid.lan
[2026-01-08 06:30:51] apptainer works
[2026-01-08 06:30:51] Set ATHENA_PROC_NUMBER=8
[2026-01-08 06:30:51] Set ATHENA_CORE_NUMBER=8
[2026-01-08 06:30:52] Starting ATLAS job with PandaID=6962320406
[2026-01-08 06:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 12:32:21]  *** The last 200 lines of the pilot log: ***
[2026-01-08 12:32:21] 2026-01-08 11:31:38,569 | INFO     | time since job start (21366s) is within the limit (174528.0s)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,105 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 12:32:21] 2026-01-08 11:31:39,106 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 12:32:21] 2026-01-08 11:31:39,108 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6962320406/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,109 | INFO     | extracted standard info from prmon json
[2026-01-08 12:32:21] 2026-01-08 11:31:39,109 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 12:32:21] 2026-01-08 11:31:39,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 12:32:21] 2026-01-08 11:31:39,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 12:32:21] 2026-01-08 11:31:39,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 12:32:21] 2026-01-08 11:31:39,116 | INFO     | fitting pss+swap vs Time
[2026-01-08 12:32:21] 2026-01-08 11:31:39,117 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,121 | INFO     | sum of deviations: 150115374762.99994
[2026-01-08 12:32:21] 2026-01-08 11:31:39,121 | INFO     | mean x: 1767861403.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,121 | INFO     | mean y: 2446231.1592920353
[2026-01-08 12:32:21] 2026-01-08 11:31:39,121 | INFO     | intersect: -21966015575.98081
[2026-01-08 12:32:21] 2026-01-08 11:31:39,121 | INFO     | chi2: 6.832038178335161
[2026-01-08 12:32:21] 2026-01-08 11:31:39,122 | INFO     | sum of square deviations: 11553509647.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,125 | INFO     | sum of deviations: 170046981840.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,126 | INFO     | mean x: 1767861250.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,126 | INFO     | mean y: 2451924.3113772455
[2026-01-08 12:32:21] 2026-01-08 11:31:39,126 | INFO     | intersect: -26017301304.913006
[2026-01-08 12:32:21] 2026-01-08 11:31:39,126 | INFO     | chi2: 6.096144855015827
[2026-01-08 12:32:21] 2026-01-08 11:31:39,126 | INFO     | current chi2=6.096144855015827 (change=10.771212105530962 %)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,127 | INFO     | right removable region: 333
[2026-01-08 12:32:21] 2026-01-08 11:31:39,127 | INFO     | sum of square deviations: 11553509647.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,131 | INFO     | sum of deviations: 34683701043.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,131 | INFO     | mean x: 1767861555.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,131 | INFO     | mean y: 2479635.2155688624
[2026-01-08 12:32:21] 2026-01-08 11:31:39,131 | INFO     | intersect: -5304650712.803206
[2026-01-08 12:32:21] 2026-01-08 11:31:39,131 | INFO     | chi2: 2.3289785856362455
[2026-01-08 12:32:21] 2026-01-08 11:31:39,132 | INFO     | current chi2=2.3289785856362455 (change=65.91092548309246 %)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,132 | INFO     | sum of square deviations: 11042365180.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,136 | INFO     | sum of deviations: -24428912353.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,136 | INFO     | mean x: 1767861708.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,136 | INFO     | mean y: 2497196.3191489363
[2026-01-08 12:32:21] 2026-01-08 11:31:39,136 | INFO     | intersect: 3913519700.3726583
[2026-01-08 12:32:21] 2026-01-08 11:31:39,136 | INFO     | chi2: 0.9075868562075354
[2026-01-08 12:32:21] 2026-01-08 11:31:39,137 | INFO     | current chi2=0.9075868562075354 (change=61.030691230696966 %)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,137 | INFO     | sum of square deviations: 10546523325.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,140 | INFO     | sum of deviations: -29907240643.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,141 | INFO     | mean x: 1767861860.5
[2026-01-08 12:32:21] 2026-01-08 11:31:39,141 | INFO     | mean y: 2498875.7438271604
[2026-01-08 12:32:21] 2026-01-08 11:31:39,141 | INFO     | intersect: 5015702607.167721
[2026-01-08 12:32:21] 2026-01-08 11:31:39,141 | INFO     | chi2: 0.8926932937777607
[2026-01-08 12:32:21] 2026-01-08 11:31:39,141 | INFO     | current chi2=0.8926932937777607 (change=1.6410068444588644 %)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,142 | INFO     | left removable region: 30
[2026-01-08 12:32:21] 2026-01-08 11:31:39,142 | INFO     | sum of square deviations: 8625843592.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,145 | INFO     | sum of deviations: 17134696748.000002
[2026-01-08 12:32:21] 2026-01-08 11:31:39,145 | INFO     | mean x: 1767862135.0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,145 | INFO     | mean y: 2497047.7227722774
[2026-01-08 12:32:21] 2026-01-08 11:31:39,146 | INFO     | intersect: -3509250093.576059
[2026-01-08 12:32:21] 2026-01-08 11:31:39,146 | INFO     | chi2: 0.0020064217478748827
[2026-01-08 12:32:21] 2026-01-08 11:31:39,146 | INFO     | current memory leak: 1.99 B/s (using 303 data points, chi2=0.00)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,147 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,147 | INFO     | ..............................
[2026-01-08 12:32:21] 2026-01-08 11:31:39,147 | INFO     | . Timing measurements:
[2026-01-08 12:32:21] 2026-01-08 11:31:39,147 | INFO     | . get job = 0 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . initial setup = 12 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . payload setup = 151 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . stage-in = 0 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . payload execution = 20860 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . stage-out = 4 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | . log creation = 1 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,148 | INFO     | ..............................
[2026-01-08 12:32:21] 2026-01-08 11:31:39,275 | INFO     | 
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | job summary report
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | --------------------------------------------------
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | PanDA job id: 6962320406
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | task id: 47898826
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | errors: (none)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | pilot state: finished 
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | transexitcode: 0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | exeerrorcode: 0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,276 | INFO     | exeerrordiag: 
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | exitcode: 0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | exitmsg: OK
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | cpuconsumptiontime: 77525 s
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | nevents: 400
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | neventsw: 0
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | pid: 705
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | pgrp: 705
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | corecount: 8
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | event service: False
[2026-01-08 12:32:21] 2026-01-08 11:31:39,277 | INFO     | sizes: {0: 2283141, 1: 2283998, 2: 2283998, 13: 2284026, 23: 2284082, 34: 2284110, 45: 2284266, 56: 2284294, 67: 2284322, 77: 2284350, 88: 2284406, 99: 2284714, 11
[2026-01-08 12:32:21] 2026-01-08 11:31:39,278 | INFO     | --------------------------------------------------
[2026-01-08 12:32:21] 2026-01-08 11:31:39,278 | INFO     | 
[2026-01-08 12:32:21] 2026-01-08 11:31:39,278 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-08 12:32:21] 2026-01-08 11:31:39,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,982 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 12:32:21] 2026-01-08 11:31:39,982 | INFO     | job 6962320406 has completed (purged errors)
[2026-01-08 12:32:21] 2026-01-08 11:31:39,982 | INFO     | overall cleanup function is called
[2026-01-08 12:32:21] 2026-01-08 11:31:40,992 | INFO     | --- collectZombieJob: --- 10, [705]
[2026-01-08 12:32:21] 2026-01-08 11:31:40,992 | INFO     | zombie collector waiting for pid 705
[2026-01-08 12:32:21] 2026-01-08 11:31:40,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 12:32:21] 2026-01-08 11:31:40,992 | INFO     | collected zombie processes
[2026-01-08 12:32:21] 2026-01-08 11:31:40,992 | INFO     | will attempt to kill all subprocesses of pid=705
[2026-01-08 12:32:21] 2026-01-08 11:31:41,074 | INFO     | process IDs to be killed: [705] (in reverse order)
[2026-01-08 12:32:21] 2026-01-08 11:31:41,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 12:32:21] 2026-01-08 11:31:41,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 12:32:21] 2026-01-08 11:31:41,962 | INFO     | did not find any defunct processes belonging to 705
[2026-01-08 12:32:21] 2026-01-08 11:31:41,963 | INFO     | did not find any defunct processes belonging to 705
[2026-01-08 12:32:21] 2026-01-08 11:31:41,964 | INFO     | ready for new job
[2026-01-08 12:32:21] 2026-01-08 11:31:41,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 12:32:21] 2026-01-08 11:31:41,966 | INFO     | ***************************************
[2026-01-08 12:32:21] 2026-01-08 11:31:41,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 12:32:21] 2026-01-08 11:31:41,967 | INFO     | ***************************************
[2026-01-08 12:32:21] 2026-01-08 11:31:41,967 | INFO     | 
[2026-01-08 12:32:21] 2026-01-08 11:31:41,967 | INFO     | pilot is running in a VM
[2026-01-08 12:32:21] 2026-01-08 11:31:41,967 | INFO     | architecture information:
[2026-01-08 12:32:21] 2026-01-08 11:31:41,987 | INFO     | executing command: cat /etc/os-release
[2026-01-08 12:32:21] 2026-01-08 11:31:42,254 | INFO     | cat /etc/os-release:
[2026-01-08 12:32:21] NAME="CentOS Linux"
[2026-01-08 12:32:21] VERSION="7 (Core)"
[2026-01-08 12:32:21] ID="centos"
[2026-01-08 12:32:21] ID_LIKE="rhel fedora"
[2026-01-08 12:32:21] VERSION_ID="7"
[2026-01-08 12:32:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 12:32:21] ANSI_COLOR="0;31"
[2026-01-08 12:32:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 12:32:21] HOME_URL="https://www.centos.org/"
[2026-01-08 12:32:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 12:32:21] 
[2026-01-08 12:32:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 12:32:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 12:32:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 12:32:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 12:32:21] 
[2026-01-08 12:32:21] 2026-01-08 11:31:42,255 | INFO     | ***************************************
[2026-01-08 12:32:21] 2026-01-08 11:31:42,758 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-08 12:32:21] 2026-01-08 11:31:43,063 | INFO     | sufficient remaining disk space (496868786176 B)
[2026-01-08 12:32:21] 2026-01-08 11:31:43,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 12:32:21] 2026-01-08 11:31:43,064 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 12:32:21] 2026-01-08 11:31:43,064 | INFO     | update_server=False
[2026-01-08 12:32:21] 2026-01-08 11:31:43,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 12:32:21] 2026-01-08 11:31:43,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 12:32:21] 2026-01-08 11:31:43,544 | INFO     | all payload control threads have been joined
[2026-01-08 12:32:21] 2026-01-08 11:31:43,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:32:21] 2026-01-08 11:31:43,679 | INFO     | aborting loop
[2026-01-08 12:32:21] 2026-01-08 11:31:44,048 | INFO     | all data control threads have been joined
[2026-01-08 12:32:21] 2026-01-08 11:31:44,070 | INFO     | [job] retrieve thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,169 | INFO     | all job control threads have been joined
[2026-01-08 12:32:21] 2026-01-08 11:31:44,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:32:21] 2026-01-08 11:31:44,524 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,550 | INFO     | [payload] control thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,617 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,626 | INFO     | [data] copytool_in thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,685 | INFO     | [job] job monitor thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,854 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:44,880 | INFO     | [payload] failed_post thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,054 | INFO     | [data] control thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,175 | INFO     | [job] control thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,239 | INFO     | [data] copytool_out thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,296 | INFO     | [job] queue monitor thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,393 | INFO     | [payload] validate_post thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,543 | INFO     | [job] validate thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:31:45,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 12:32:21] 2026-01-08 11:31:49,794 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 12:32:21] 2026-01-08 11:32:08,591 | INFO     | [monitor] cgroup control has ended
[2026-01-08 12:32:21] 2026-01-08 11:32:10,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803712411456)>', '<ExcThread(monitor, started 139803064530688)>']
[2026-01-08 12:32:21] 2026-01-08 11:32:11,718 | INFO     | PID=26634 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 12:32:21] 2026-01-08 11:32:11,719 | INFO     | .. there are 2 such processes running
[2026-01-08 12:32:21] 2026-01-08 11:32:11,721 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 12:32:21] 2026-01-08 11:32:11,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 12:32:21] 2026-01-08 11:32:11,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 12:32:21] 2026-01-08 11:32:11,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 12:32:21] 2026-01-08 11:32:11,721 | INFO     | [monitor] control thread has ended
[2026-01-08 12:32:21] 2026-01-08 11:32:15,035 | INFO     | all workflow threads have been joined
[2026-01-08 12:32:21] 2026-01-08 11:32:15,035 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 12:32:21] 2026-01-08 11:32:15,035 | INFO     | traces error code: 0
[2026-01-08 12:32:21] 2026-01-08 11:32:15,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 12:32:21] 2026-01-08 11:32:15,491 [wrapper] ==== pilot stdout END ====
[2026-01-08 12:32:21] 2026-01-08 11:32:15,591 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 12:32:21] 2026-01-08 11:32:15,716 [wrapper] pilotpid: 26634
[2026-01-08 12:32:21] 2026-01-08 11:32:15,835 [wrapper] Pilot exit status: 0
[2026-01-08 12:32:21] 2026-01-08 11:32:16,372 [wrapper] pandaids: 6962320406
[2026-01-08 12:32:21] 2026-01-08 11:32:17,337 [wrapper] cleanup supervisor_pilot 32239 26635
[2026-01-08 12:32:21] 2026-01-08 11:32:17,448 [wrapper] Test setup, not cleaning
[2026-01-08 12:32:21] 2026-01-08 11:32:17,544 [wrapper] apfmon messages muted
[2026-01-08 12:32:21] 2026-01-08 11:32:17,633 [wrapper] ==== wrapper stdout END ====
[2026-01-08 12:32:21] 2026-01-08 11:32:17,731 [wrapper] ==== wrapper stderr END ====
[2026-01-08 12:32:21]  *** Error codes and diagnostics ***
[2026-01-08 12:32:21]     "exeErrorCode": 0,
[2026-01-08 12:32:21]     "exeErrorDiag": "",
[2026-01-08 12:32:21]     "pilotErrorCode": 0,
[2026-01-08 12:32:21]     "pilotErrorDiag": "",
[2026-01-08 12:32:21]  *** Listing of results directory ***
[2026-01-08 12:32:21] total 435700
[2026-01-08 12:32:21] -rwx------. 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc       100 Jan  8 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 12:32:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 06:30 run_atlas
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc       105 Jan  8 06:30 job.xml
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc 222600981 Jan  8 06:30 EVNT.47898824._000616.pool.root.1
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc     15847 Jan  8 06:30 start_atlas.sh
[2026-01-08 12:32:21] drwxrwx--x. 2 boinc boinc        68 Jan  8 06:30 shared
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc    592405 Jan  8 06:30 input.tar.gz
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc      6390 Jan  8 06:30 init_data.xml
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc         0 Jan  8 06:30 boinc_lockfile
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc      2519 Jan  8 06:30 pandaJob.out
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc    989827 Jan  8 06:35 agis_schedconf.cvmfs.json
[2026-01-08 12:32:21] drwx------. 5 boinc boinc      4096 Jan  8 06:35 pilot3
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc 212933469 Jan  8 12:28 HITS.47898826._014219.pool.root.1
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc       531 Jan  8 12:28 boinc_task_state.xml
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc      1015 Jan  8 12:29 memory_monitor_summary.json
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc   1516240 Jan  8 12:29 agis_ddmendpoints.agis.ALL.json
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc    533980 Jan  8 12:29 log.47898826._014219.job.log.tgz.1
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc      7776 Jan  8 12:31 heartbeat.json
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc        95 Jan  8 12:32 pilot_heartbeat.json
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc      4885 Jan  8 12:32 pilotlog.txt
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc   2827980 Jan  8 12:32 log.47898826._014219.job.log.1
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc      8192 Jan  8 12:32 boinc_mmap_file
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc        28 Jan  8 12:32 wrapper_checkpoint.txt
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc       357 Jan  8 12:32 output.list
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc       620 Jan  8 12:32 runtime_log
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc   3379200 Jan  8 12:32 result.tar.gz
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc       657 Jan  8 12:32 z1KMDmWopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3viKDmnAxTPm.diag
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc      8833 Jan  8 12:32 runtime_log.err
[2026-01-08 12:32:21] -rw-r--r--. 1 boinc boinc     20766 Jan  8 12:32 stderr.txt
[2026-01-08 12:32:21] HITS file was successfully produced:
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc 212933469 Jan  8 12:28 shared/HITS.pool.root.1
[2026-01-08 12:32:21]  *** Contents of shared directory: ***
[2026-01-08 12:32:21] total 429224
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc 222600981 Jan  8 06:30 ATLAS.root_0
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc     15847 Jan  8 06:30 start_atlas.sh
[2026-01-08 12:32:21] -rw-r--r--. 2 boinc boinc    592405 Jan  8 06:30 input.tar.gz
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc 212933469 Jan  8 12:28 HITS.pool.root.1
[2026-01-08 12:32:21] -rw-------. 1 boinc boinc   3379200 Jan  8 12:32 result.tar.gz
12:32:22 (22852): run_atlas exited; CPU time 77739.451324
12:32:22 (22852): called boinc_finish(0)

</stderr_txt>
]]>

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