Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:12 (848542): wrapper (7.7.26015): starting
14:13:12 (848542): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 14:13:12] Arguments: --nthreads 4
[2026-01-08 14:13:12] Threads: 4
[2026-01-08 14:13:12] Checking for CVMFS
[2026-01-08 14:13:12] No cvmfs_config command found, will try listing directly
[2026-01-08 14:13:12] CVMFS is ok
[2026-01-08 14:13:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:13:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:13:12] Further information can be found at the LHC@home message board.
[2026-01-08 14:13:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:13:12] Checking for apptainer binary...
[2026-01-08 14:13:12] which: no apptainer in ((null))
[2026-01-08 14:13:12] apptainer is not installed, using version from CVMFS
[2026-01-08 14:13:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:13:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-01-08 14:13:12] apptainer works
[2026-01-08 14:13:12] Set ATHENA_PROC_NUMBER=4
[2026-01-08 14:13:12] Set ATHENA_CORE_NUMBER=4
[2026-01-08 14:13:12] Starting ATLAS job with PandaID=6962320208
[2026-01-08 14:13:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:55:22]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:55:22] 2026-01-08 19:51:29,839 | INFO     | total number of processed events: 400 (read)
[2026-01-08 21:55:22] 2026-01-08 19:51:29,839 | INFO     | executing command: lscpu
[2026-01-08 21:55:22] 2026-01-08 19:51:29,891 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 21:55:22] 2026-01-08 19:51:31,742 | INFO     | time since job start (23887s) is within the limit (174528.0s)
[2026-01-08 21:55:22] 2026-01-08 19:51:32,428 | WARNING  | process 859067 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 21:55:22] 2026-01-08 19:51:32,428 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962320208/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:55:22] 2026-01-08 19:51:32,775 | INFO     | number of running child processes to parent process 859067: 1
[2026-01-08 21:55:22] 2026-01-08 19:51:32,776 | INFO     | maximum number of monitored processes: 6
[2026-01-08 21:55:22] 2026-01-08 19:51:33,748 | INFO     | time since job start (23889s) is within the limit (174528.0s)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,499 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 21:55:22] 2026-01-08 19:51:34,505 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2590.09015
[2026-01-08 21:55:22] 2026-01-08 19:51:34,511 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962320208/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,511 | INFO     | extracted standard info from prmon json
[2026-01-08 21:55:22] 2026-01-08 19:51:34,511 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:55:22] 2026-01-08 19:51:34,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:55:22] 2026-01-08 19:51:34,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:55:22] 2026-01-08 19:51:34,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:55:22] 2026-01-08 19:51:34,517 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:55:22] 2026-01-08 19:51:34,518 | INFO     | sum of square deviations: 18535566140.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,522 | INFO     | sum of deviations: 2970683347.000008
[2026-01-08 21:55:22] 2026-01-08 19:51:34,522 | INFO     | mean x: 1767889927.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,522 | INFO     | mean y: 2358445.1867007674
[2026-01-08 21:55:22] 2026-01-08 19:51:34,522 | INFO     | intersect: -280980144.301236
[2026-01-08 21:55:22] 2026-01-08 19:51:34,523 | INFO     | chi2: 1.4263820485637166
[2026-01-08 21:55:22] 2026-01-08 19:51:34,524 | INFO     | sum of square deviations: 17833534372.5
[2026-01-08 21:55:22] 2026-01-08 19:51:34,527 | INFO     | sum of deviations: 1654715554.4999993
[2026-01-08 21:55:22] 2026-01-08 19:51:34,527 | INFO     | mean x: 1767889774.5
[2026-01-08 21:55:22] 2026-01-08 19:51:34,527 | INFO     | mean y: 2358159.3082901556
[2026-01-08 21:55:22] 2026-01-08 19:51:34,528 | INFO     | intersect: -161678573.25424978
[2026-01-08 21:55:22] 2026-01-08 19:51:34,528 | INFO     | chi2: 1.4253757575499295
[2026-01-08 21:55:22] 2026-01-08 19:51:34,528 | INFO     | current chi2=1.4253757575499295 (change=0.07054849118442053 %)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,528 | INFO     | right removable region: 385
[2026-01-08 21:55:22] 2026-01-08 19:51:34,529 | INFO     | sum of square deviations: 17833534372.5
[2026-01-08 21:55:22] 2026-01-08 19:51:34,533 | INFO     | sum of deviations: -50987993048.50001
[2026-01-08 21:55:22] 2026-01-08 19:51:34,533 | INFO     | mean x: 1767890079.5
[2026-01-08 21:55:22] 2026-01-08 19:51:34,533 | INFO     | mean y: 2370104.3601036267
[2026-01-08 21:55:22] 2026-01-08 19:51:34,533 | INFO     | intersect: 5056958006.075161
[2026-01-08 21:55:22] 2026-01-08 19:51:34,534 | INFO     | chi2: 0.08996999755566593
[2026-01-08 21:55:22] 2026-01-08 19:51:34,534 | INFO     | current chi2=0.08996999755566593 (change=93.6924334089692 %)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,535 | INFO     | sum of square deviations: 17149456430.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,538 | INFO     | sum of deviations: -52728622162.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,539 | INFO     | mean x: 1767890232.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,539 | INFO     | mean y: 2370486.9842519686
[2026-01-08 21:55:22] 2026-01-08 19:51:34,539 | INFO     | intersect: 5438018925.610509
[2026-01-08 21:55:22] 2026-01-08 19:51:34,540 | INFO     | chi2: 0.08274665133047379
[2026-01-08 21:55:22] 2026-01-08 19:51:34,540 | INFO     | current chi2=0.08274665133047379 (change=8.028616673822771 %)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,540 | INFO     | left removable region: 20
[2026-01-08 21:55:22] 2026-01-08 19:51:34,541 | INFO     | sum of square deviations: 15078347830.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,546 | INFO     | sum of deviations: -45428091958.99999
[2026-01-08 21:55:22] 2026-01-08 19:51:34,547 | INFO     | mean x: 1767890354.0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,547 | INFO     | mean y: 2368408.797260274
[2026-01-08 21:55:22] 2026-01-08 19:51:34,547 | INFO     | intersect: 5328673815.756495
[2026-01-08 21:55:22] 2026-01-08 19:51:34,548 | INFO     | chi2: 0.07818597028983185
[2026-01-08 21:55:22] 2026-01-08 19:51:34,549 | INFO     | current memory leak: -3.01 B/s (using 365 data points, chi2=0.08)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,550 | INFO     | could have reported an average CPU frequency of 2422 MHz (17 samples)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,550 | INFO     | ..............................
[2026-01-08 21:55:22] 2026-01-08 19:51:34,550 | INFO     | . Timing measurements:
[2026-01-08 21:55:22] 2026-01-08 19:51:34,550 | INFO     | . get job = 0 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,551 | INFO     | . initial setup = 1 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,551 | INFO     | . payload setup = 6 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,551 | INFO     | . stage-in = 0 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,551 | INFO     | . payload execution = 23854 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,552 | INFO     | . stage-out = 1 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,552 | INFO     | . log creation = 0 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,552 | INFO     | ..............................
[2026-01-08 21:55:22] 2026-01-08 19:51:34,647 | INFO     | 
[2026-01-08 21:55:22] 2026-01-08 19:51:34,648 | INFO     | job summary report
[2026-01-08 21:55:22] 2026-01-08 19:51:34,648 | INFO     | --------------------------------------------------
[2026-01-08 21:55:22] 2026-01-08 19:51:34,648 | INFO     | PanDA job id: 6962320208
[2026-01-08 21:55:22] 2026-01-08 19:51:34,648 | INFO     | task id: 47898826
[2026-01-08 21:55:22] 2026-01-08 19:51:34,648 | INFO     | errors: (none)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | pilot state: finished 
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | transexitcode: 0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | exeerrorcode: 0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | exeerrordiag: 
[2026-01-08 21:55:22] 2026-01-08 19:51:34,649 | INFO     | exitcode: 0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | exitmsg: OK
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | cpuconsumptiontime: 91744 s
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | nevents: 400
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | neventsw: 0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | pid: 859067
[2026-01-08 21:55:22] 2026-01-08 19:51:34,650 | INFO     | pgrp: 859067
[2026-01-08 21:55:22] 2026-01-08 19:51:34,651 | INFO     | corecount: 4
[2026-01-08 21:55:22] 2026-01-08 19:51:34,651 | INFO     | event service: False
[2026-01-08 21:55:22] 2026-01-08 19:51:34,651 | INFO     | sizes: {0: 2283141, 1: 2284008, 2: 2284008, 6: 2284298, 12: 2284326, 23865: 2319399, 23866: 2328419, 23867: 2328475, 23874: 2328733}
[2026-01-08 21:55:22] 2026-01-08 19:51:34,651 | INFO     | --------------------------------------------------
[2026-01-08 21:55:22] 2026-01-08 19:51:34,651 | INFO     | 
[2026-01-08 21:55:22] 2026-01-08 19:51:34,652 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-01-08 21:55:22] 2026-01-08 19:51:34,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | job 6962320208 has completed (purged errors)
[2026-01-08 21:55:22] 2026-01-08 19:51:34,678 | INFO     | overall cleanup function is called
[2026-01-08 21:55:22] 2026-01-08 19:51:35,686 | INFO     | --- collectZombieJob: --- 10, [859067]
[2026-01-08 21:55:22] 2026-01-08 19:51:35,687 | INFO     | zombie collector waiting for pid 859067
[2026-01-08 21:55:22] 2026-01-08 19:51:35,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:55:22] 2026-01-08 19:51:35,687 | INFO     | collected zombie processes
[2026-01-08 21:55:22] 2026-01-08 19:51:35,687 | INFO     | will attempt to kill all subprocesses of pid=859067
[2026-01-08 21:55:22] 2026-01-08 19:51:36,105 | INFO     | process IDs to be killed: [859067] (in reverse order)
[2026-01-08 21:55:22] 2026-01-08 19:51:36,196 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:55:22] 2026-01-08 19:51:36,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:55:22] 2026-01-08 19:51:36,208 | INFO     | did not find any defunct processes belonging to 859067
[2026-01-08 21:55:22] 2026-01-08 19:51:36,219 | INFO     | did not find any defunct processes belonging to 859067
[2026-01-08 21:55:22] 2026-01-08 19:51:36,219 | INFO     | ready for new job
[2026-01-08 21:55:22] 2026-01-08 19:51:36,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:55:22] 2026-01-08 19:51:36,222 | INFO     | ***************************************
[2026-01-08 21:55:22] 2026-01-08 19:51:36,222 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:55:22] 2026-01-08 19:51:36,223 | INFO     | ***************************************
[2026-01-08 21:55:22] 2026-01-08 19:51:36,223 | INFO     | 
[2026-01-08 21:55:22] 2026-01-08 19:51:36,225 | INFO     | architecture information:
[2026-01-08 21:55:22] 2026-01-08 19:51:36,226 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:55:22] 2026-01-08 19:51:36,241 | INFO     | cat /etc/os-release:
[2026-01-08 21:55:22] NAME="CentOS Linux"
[2026-01-08 21:55:22] VERSION="7 (Core)"
[2026-01-08 21:55:22] ID="centos"
[2026-01-08 21:55:22] ID_LIKE="rhel fedora"
[2026-01-08 21:55:22] VERSION_ID="7"
[2026-01-08 21:55:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:55:22] ANSI_COLOR="0;31"
[2026-01-08 21:55:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:55:22] HOME_URL="https://www.centos.org/"
[2026-01-08 21:55:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:55:22] 
[2026-01-08 21:55:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:55:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:55:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:55:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:55:22] 
[2026-01-08 21:55:22] 2026-01-08 19:51:36,242 | INFO     | ***************************************
[2026-01-08 21:55:22] 2026-01-08 19:51:36,744 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-01-08 21:55:22] 2026-01-08 19:51:36,761 | INFO     | sufficient remaining disk space (1673355329536 B)
[2026-01-08 21:55:22] 2026-01-08 19:51:36,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:55:22] 2026-01-08 19:51:36,762 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:55:22] 2026-01-08 19:51:36,762 | INFO     | update_server=False
[2026-01-08 21:55:22] 2026-01-08 19:51:36,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:55:22] 2026-01-08 19:51:36,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:55:22] 2026-01-08 19:51:36,763 | INFO     | aborting loop
[2026-01-08 21:55:22] 2026-01-08 19:51:37,252 | INFO     | all data control threads have been joined
[2026-01-08 21:55:22] 2026-01-08 19:51:37,638 | INFO     | all job control threads have been joined
[2026-01-08 21:55:22] 2026-01-08 19:51:37,765 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:37,767 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:37,860 | INFO     | all payload control threads have been joined
[2026-01-08 21:55:22] 2026-01-08 19:51:37,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:55:22] 2026-01-08 19:51:38,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:55:22] 2026-01-08 19:51:38,156 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,227 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,257 | INFO     | [data] control thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,298 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,317 | INFO     | [job] validate thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,379 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,642 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,644 | INFO     | [job] control thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,814 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:38,864 | INFO     | [payload] control thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:39,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:55:22] 2026-01-08 19:51:40,003 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:40,658 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:51:42,132 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:55:22] 2026-01-08 19:52:03,179 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:55:22] 2026-01-08 19:52:04,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23140251338560)>', '<ExcThread(monitor, started 23139530553088)>']
[2026-01-08 21:55:22] 2026-01-08 19:52:07,281 | INFO     | PID=852215 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 21:55:22] 2026-01-08 19:52:07,281 | INFO     | .. there are 2 such processes running
[2026-01-08 21:55:22] 2026-01-08 19:52:07,282 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:55:22] 2026-01-08 19:52:07,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:55:22] 2026-01-08 19:52:07,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:55:22] 2026-01-08 19:52:07,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:55:22] 2026-01-08 19:52:07,283 | INFO     | [monitor] control thread has ended
[2026-01-08 21:55:22] 2026-01-08 19:52:09,498 | INFO     | all workflow threads have been joined
[2026-01-08 21:55:22] 2026-01-08 19:52:09,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:55:22] 2026-01-08 19:52:09,499 | INFO     | traces error code: 0
[2026-01-08 21:55:22] 2026-01-08 19:52:09,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:55:22] 2026-01-08 19:52:09,716 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:55:22] 2026-01-08 19:52:09,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:55:22] 2026-01-08 19:52:09,724 [wrapper] pilotpid: 852215
[2026-01-08 21:55:22] 2026-01-08 19:52:09,728 [wrapper] Pilot exit status: 0
[2026-01-08 21:55:22] 2026-01-08 19:52:09,742 [wrapper] pandaids: 6962320208
[2026-01-08 21:55:22] 2026-01-08 19:52:09,828 [wrapper] cleanup supervisor_pilot 1080312 852216
[2026-01-08 21:55:22] 2026-01-08 19:52:09,832 [wrapper] Test setup, not cleaning
[2026-01-08 21:55:22] 2026-01-08 19:52:09,836 [wrapper] apfmon messages muted
[2026-01-08 21:55:22] 2026-01-08 19:52:09,839 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:55:22] 2026-01-08 19:52:09,843 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:55:22]  *** Error codes and diagnostics ***
[2026-01-08 21:55:22]     "exeErrorCode": 0,
[2026-01-08 21:55:22]     "exeErrorDiag": "",
[2026-01-08 21:55:22]     "pilotErrorCode": 0,
[2026-01-08 21:55:22]     "pilotErrorDiag": "",
[2026-01-08 21:55:22]  *** Listing of results directory ***
[2026-01-08 21:55:22] total 439792
[2026-01-08 21:55:22] -rwx------ 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc       100 Jan  8 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:55:22] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 14:13 run_atlas
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc       105 Jan  8 14:13 job.xml
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc 223800447 Jan  8 14:13 EVNT.47898824._000608.pool.root.1
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc      6422 Jan  8 14:13 init_data.xml
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc     15847 Jan  8 14:13 start_atlas.sh
[2026-01-08 21:55:22] drwxrwx--x 2 boinc boinc      4096 Jan  8 14:13 shared
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc    592397 Jan  8 14:13 input.tar.gz
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc         0 Jan  8 14:13 boinc_lockfile
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc      2519 Jan  8 14:13 pandaJob.out
[2026-01-08 21:55:22] -rw------- 1 boinc boinc    989843 Jan  8 14:13 agis_schedconf.cvmfs.json
[2026-01-08 21:55:22] drwx------ 5 boinc boinc      4096 Jan  8 14:13 pilot3
[2026-01-08 21:55:22] -rw------- 1 boinc boinc 214895307 Jan  8 20:50 HITS.47898826._014054.pool.root.1
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc       529 Jan  8 20:50 boinc_task_state.xml
[2026-01-08 21:55:22] -rw------- 1 boinc boinc      1035 Jan  8 20:51 memory_monitor_summary.json
[2026-01-08 21:55:22] -rw------- 1 boinc boinc   1516240 Jan  8 20:51 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:55:22] -rw------- 1 boinc boinc    539135 Jan  8 20:51 log.47898826._014054.job.log.tgz.1
[2026-01-08 21:55:22] -rw------- 1 boinc boinc      7831 Jan  8 20:51 heartbeat.json
[2026-01-08 21:55:22] -rw------- 1 boinc boinc        95 Jan  8 20:52 pilot_heartbeat.json
[2026-01-08 21:55:22] -rw------- 1 boinc boinc      4833 Jan  8 20:52 pilotlog.txt
[2026-01-08 21:55:22] -rw------- 1 boinc boinc   3329872 Jan  8 20:52 log.47898826._014054.job.log.1
[2026-01-08 21:55:22] -rw------- 1 boinc boinc       357 Jan  8 20:52 output.list
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc       620 Jan  8 20:52 runtime_log
[2026-01-08 21:55:22] -rw------- 1 boinc boinc   3891200 Jan  8 20:52 result.tar.gz
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc      9206 Jan  8 20:52 runtime_log.err
[2026-01-08 21:55:22] -rw------- 1 boinc boinc       667 Jan  8 20:52 ngRMDmtopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiqdKDmhT385m.diag
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc        27 Jan  8 21:55 wrapper_checkpoint.txt
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc      8192 Jan  8 21:55 boinc_mmap_file
[2026-01-08 21:55:22] -rw-r--r-- 1 boinc boinc     21185 Jan  8 21:55 stderr.txt
[2026-01-08 21:55:22] HITS file was successfully produced:
[2026-01-08 21:55:22] -rw------- 1 boinc boinc 214895307 Jan  8 20:50 shared/HITS.pool.root.1
[2026-01-08 21:55:22]  *** Contents of shared directory: ***
[2026-01-08 21:55:22] total 432820
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc 223800447 Jan  8 14:13 ATLAS.root_0
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc     15847 Jan  8 14:13 start_atlas.sh
[2026-01-08 21:55:22] -rw-r--r-- 2 boinc boinc    592397 Jan  8 14:13 input.tar.gz
[2026-01-08 21:55:22] -rw------- 1 boinc boinc 214895307 Jan  8 20:50 HITS.pool.root.1
[2026-01-08 21:55:22] -rw------- 1 boinc boinc   3891200 Jan  8 20:52 result.tar.gz
21:55:24 (848542): run_atlas exited; CPU time 92823.401323
21:55:24 (848542): called boinc_finish(0)

</stderr_txt>
]]>

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