Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:30:15 (16132): wrapper (7.7.26015): starting
18:30:15 (16132): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 18:30:15] Arguments: --nthreads 8
[2026-01-07 18:30:15] Threads: 8
[2026-01-07 18:30:15] Checking for CVMFS
[2026-01-07 18:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 18:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 18:30:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 18:30:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 18:30:15] 2.11.2.0 2864 140291 91084 154884 2 59 16137400 20275201 1 130560 0 40949265 99.870 8017102 37253 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 18:30:15] CVMFS is ok
[2026-01-07 18:30:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 18:30:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 18:30:15] Further information can be found at the LHC@home message board.
[2026-01-07 18:30:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 18:30:15] Checking for apptainer binary...
[2026-01-07 18:30:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 18:30:15] Running /usr/bin/apptainer --version
[2026-01-07 18:30:15] apptainer version 1.3.2-1.el7
[2026-01-07 18:30:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 18:30:17] c-115-17.aglt2.org
[2026-01-07 18:30:17] apptainer works
[2026-01-07 18:30:17] Set ATHENA_PROC_NUMBER=8
[2026-01-07 18:30:17] Set ATHENA_CORE_NUMBER=8
[2026-01-07 18:30:17] Starting ATLAS job with PandaID=6962320534
[2026-01-07 18:30:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 21:11:01]  *** The last 200 lines of the pilot log: ***
[2026-01-07 21:11:01] 2026-01-08 02:10:24,079 | INFO     | time since job start (9591s) is within the limit (174528.0s)
[2026-01-07 21:11:01] 2026-01-08 02:10:25,197 | INFO     | PID=19808 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 21:11:01] 2026-01-08 02:10:25,562 | INFO     | monitor loop #708: job 0:6962320534 is in state 'finished'
[2026-01-07 21:11:01] 2026-01-08 02:10:25,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-07 21:11:01] 2026-01-08 02:10:26,198 | INFO     | time since job start (9593s) is within the limit (174528.0s)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,065 | INFO     | monitor loop #709: job 0:6962320534 is in state 'finished'
[2026-01-07 21:11:01] 2026-01-08 02:10:28,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,203 | INFO     | time since job start (9595s) is within the limit (174528.0s)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,260 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-07 21:11:01] 2026-01-08 02:10:28,265 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-07 21:11:01] 2026-01-08 02:10:28,266 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962320534/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,267 | INFO     | extracted standard info from prmon json
[2026-01-07 21:11:01] 2026-01-08 02:10:28,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 21:11:01] 2026-01-08 02:10:28,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 21:11:01] 2026-01-08 02:10:28,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 21:11:01] 2026-01-08 02:10:28,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 21:11:01] 2026-01-08 02:10:28,271 | INFO     | fitting pss+swap vs Time
[2026-01-07 21:11:01] 2026-01-08 02:10:28,272 | INFO     | sum of square deviations: 1199940638.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,273 | INFO     | sum of deviations: -8492084927.000007
[2026-01-07 21:11:01] 2026-01-08 02:10:28,273 | INFO     | mean x: 1767833422.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,273 | INFO     | mean y: 2565571.6369426753
[2026-01-07 21:11:01] 2026-01-08 02:10:28,273 | INFO     | intersect: 12513677439.16671
[2026-01-07 21:11:01] 2026-01-08 02:10:28,273 | INFO     | chi2: 1.5458216167919305
[2026-01-07 21:11:01] 2026-01-08 02:10:28,274 | INFO     | sum of square deviations: 1088905998.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,274 | INFO     | sum of deviations: -7856824522.000001
[2026-01-07 21:11:01] 2026-01-08 02:10:28,274 | INFO     | mean x: 1767833269.5
[2026-01-07 21:11:01] 2026-01-08 02:10:28,274 | INFO     | mean y: 2566446.4342105263
[2026-01-07 21:11:01] 2026-01-08 02:10:28,275 | INFO     | intersect: 12758080520.308414
[2026-01-07 21:11:01] 2026-01-08 02:10:28,275 | INFO     | chi2: 1.5452982253321574
[2026-01-07 21:11:01] 2026-01-08 02:10:28,275 | INFO     | current chi2=1.5452982253321574 (change=0.033858464268296085 %)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,275 | INFO     | right removable region: 151
[2026-01-07 21:11:01] 2026-01-08 02:10:28,275 | INFO     | sum of square deviations: 1088905998.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,276 | INFO     | sum of deviations: -30928494256.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,276 | INFO     | mean x: 1767833574.5
[2026-01-07 21:11:01] 2026-01-08 02:10:28,276 | INFO     | mean y: 2595914.7236842103
[2026-01-07 21:11:01] 2026-01-08 02:10:28,276 | INFO     | intersect: 50214855425.56458
[2026-01-07 21:11:01] 2026-01-08 02:10:28,277 | INFO     | chi2: 0.16956914909897083
[2026-01-07 21:11:01] 2026-01-08 02:10:28,277 | INFO     | current chi2=0.16956914909897083 (change=89.03048403147056 %)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,277 | INFO     | sum of square deviations: 984941258.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | sum of deviations: -30633140734.999996
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | mean x: 1767833727.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | mean y: 2595397.619047619
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | intersect: 54984858467.02797
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | chi2: 0.1447532045706285
[2026-01-07 21:11:01] 2026-01-08 02:10:28,278 | INFO     | current chi2=0.1447532045706285 (change=14.6347048742093 %)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,279 | INFO     | left removable region: 20
[2026-01-07 21:11:01] 2026-01-08 02:10:28,279 | INFO     | sum of square deviations: 697054930.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,279 | INFO     | sum of deviations: -21221071741.999996
[2026-01-07 21:11:01] 2026-01-08 02:10:28,279 | INFO     | mean x: 1767833849.0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,280 | INFO     | mean y: 2583774.809160305
[2026-01-07 21:11:01] 2026-01-08 02:10:28,280 | INFO     | intersect: 53822343628.69182
[2026-01-07 21:11:01] 2026-01-08 02:10:28,280 | INFO     | chi2: 0.13355439859989587
[2026-01-07 21:11:01] 2026-01-08 02:10:28,280 | INFO     | current memory leak: -30.44 B/s (using 131 data points, chi2=0.13)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,280 | INFO     | could have reported an average CPU frequency of 2185 MHz (9 samples)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | ..............................
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . Timing measurements:
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . get job = 0 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . initial setup = 2 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . payload setup = 8 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . stage-in = 0 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . payload execution = 9552 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,281 | INFO     | . stage-out = 0 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,282 | INFO     | . log creation = 0 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,282 | INFO     | ..............................
[2026-01-07 21:11:01] 2026-01-08 02:10:28,622 | INFO     | 
[2026-01-07 21:11:01] 2026-01-08 02:10:28,622 | INFO     | job summary report
[2026-01-07 21:11:01] 2026-01-08 02:10:28,622 | INFO     | --------------------------------------------------
[2026-01-07 21:11:01] 2026-01-08 02:10:28,622 | INFO     | PanDA job id: 6962320534
[2026-01-07 21:11:01] 2026-01-08 02:10:28,622 | INFO     | task id: 47898826
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | errors: (none)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | pilot state: finished 
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | transexitcode: 0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | exeerrorcode: 0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,623 | INFO     | exeerrordiag: 
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | exitcode: 0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | exitmsg: OK
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | cpuconsumptiontime: 71752 s
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | nevents: 400
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | neventsw: 0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,624 | INFO     | pid: 26194
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | pgrp: 26194
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | corecount: 8
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | event service: False
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | sizes: {0: 2283969, 1: 2283969, 6: 2284259, 11: 2284287, 9564: 2312707, 9566: 2321705, 9569: 2321889, 9577: 2322147}
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | --------------------------------------------------
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | 
[2026-01-07 21:11:01] 2026-01-08 02:10:28,625 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-07 21:11:01] 2026-01-08 02:10:28,651 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,652 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,652 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,652 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 21:11:01] 2026-01-08 02:10:28,655 | INFO     | job 6962320534 has completed (purged errors)
[2026-01-07 21:11:01] 2026-01-08 02:10:28,655 | INFO     | overall cleanup function is called
[2026-01-07 21:11:01] 2026-01-08 02:10:29,664 | INFO     | --- collectZombieJob: --- 10, [26194]
[2026-01-07 21:11:01] 2026-01-08 02:10:29,664 | INFO     | zombie collector waiting for pid 26194
[2026-01-07 21:11:01] 2026-01-08 02:10:29,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 21:11:01] 2026-01-08 02:10:29,664 | INFO     | collected zombie processes
[2026-01-07 21:11:01] 2026-01-08 02:10:29,664 | INFO     | will attempt to kill all subprocesses of pid=26194
[2026-01-07 21:11:01] 2026-01-08 02:10:29,751 | INFO     | process IDs to be killed: [26194] (in reverse order)
[2026-01-07 21:11:01] 2026-01-08 02:10:29,807 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 21:11:01] 2026-01-08 02:10:29,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 21:11:01] 2026-01-08 02:10:29,812 | INFO     | did not find any defunct processes belonging to 26194
[2026-01-07 21:11:01] 2026-01-08 02:10:29,816 | INFO     | did not find any defunct processes belonging to 26194
[2026-01-07 21:11:01] 2026-01-08 02:10:29,816 | INFO     | ready for new job
[2026-01-07 21:11:01] 2026-01-08 02:10:29,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 21:11:01] 2026-01-08 02:10:29,818 | INFO     | ***************************************
[2026-01-07 21:11:01] 2026-01-08 02:10:29,819 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 21:11:01] 2026-01-08 02:10:29,819 | INFO     | ***************************************
[2026-01-07 21:11:01] 2026-01-08 02:10:29,819 | INFO     | 
[2026-01-07 21:11:01] 2026-01-08 02:10:29,819 | INFO     | architecture information:
[2026-01-07 21:11:01] 2026-01-08 02:10:29,820 | INFO     | executing command: cat /etc/os-release
[2026-01-07 21:11:01] 2026-01-08 02:10:29,837 | INFO     | cat /etc/os-release:
[2026-01-07 21:11:01] NAME="CentOS Linux"
[2026-01-07 21:11:01] VERSION="7 (Core)"
[2026-01-07 21:11:01] ID="centos"
[2026-01-07 21:11:01] ID_LIKE="rhel fedora"
[2026-01-07 21:11:01] VERSION_ID="7"
[2026-01-07 21:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 21:11:01] ANSI_COLOR="0;31"
[2026-01-07 21:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 21:11:01] HOME_URL="https://www.centos.org/"
[2026-01-07 21:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 21:11:01] 
[2026-01-07 21:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 21:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 21:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 21:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 21:11:01] 
[2026-01-07 21:11:01] 2026-01-08 02:10:29,838 | INFO     | ***************************************
[2026-01-07 21:11:01] 2026-01-08 02:10:30,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-07 21:11:01] 2026-01-08 02:10:30,361 | INFO     | sufficient remaining disk space (18529386496 B)
[2026-01-07 21:11:01] 2026-01-08 02:10:30,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 21:11:01] 2026-01-08 02:10:30,362 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 21:11:01] 2026-01-08 02:10:30,362 | INFO     | update_server=False
[2026-01-07 21:11:01] 2026-01-08 02:10:30,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 21:11:01] 2026-01-08 02:10:30,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 21:11:01] 2026-01-08 02:10:30,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 21:11:01] 2026-01-08 02:10:30,572 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-07 21:11:01] 2026-01-08 02:10:30,575 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-07 21:11:01] 2026-01-08 02:10:30,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 21:11:01] 2026-01-08 02:10:30,576 | INFO     | will abort loop
[2026-01-07 21:11:01] 2026-01-08 02:10:30,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 21:11:01] 2026-01-08 02:10:30,906 | INFO     | all data control threads have been joined
[2026-01-07 21:11:01] 2026-01-08 02:10:31,368 | INFO     | [job] retrieve thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:31,368 | INFO     | [job] queue monitor thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:31,386 | INFO     | all payload control threads have been joined
[2026-01-07 21:11:01] 2026-01-08 02:10:31,442 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:31,581 | INFO     | [job] job monitor thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:31,911 | INFO     | [data] control thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,045 | INFO     | all job control threads have been joined
[2026-01-07 21:11:01] 2026-01-08 02:10:32,218 | INFO     | [payload] validate_post thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,273 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,369 | INFO     | [data] copytool_out thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,391 | INFO     | [payload] control thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,532 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,656 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,674 | INFO     | [data] copytool_in thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,676 | INFO     | [job] validate thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:32,744 | INFO     | [payload] failed_post thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:33,050 | INFO     | [job] control thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:34,806 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 21:11:01] 2026-01-08 02:10:48,792 | INFO     | [monitor] cgroup control has ended
[2026-01-07 21:11:01] 2026-01-08 02:10:50,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140035915880256)>', '<ExcThread(monitor, started 140035236022016)>']
[2026-01-07 21:11:01] 2026-01-08 02:10:55,394 | INFO     | all workflow threads have been joined
[2026-01-07 21:11:01] 2026-01-08 02:10:55,395 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 21:11:01] 2026-01-08 02:10:55,395 | INFO     | traces error code: 0
[2026-01-07 21:11:01] 2026-01-08 02:10:55,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 21:11:01] 2026-01-08 02:11:01,415 | INFO     | PID=19808 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 21:11:01] 2026-01-08 02:11:01,416 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 21:11:01] 2026-01-08 02:11:01,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 21:11:01] 2026-01-08 02:11:01,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 21:11:01] 2026-01-08 02:11:01,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 21:11:01] 2026-01-08 02:11:01,417 | INFO     | [monitor] control thread has ended
[2026-01-07 21:11:01] 2026-01-08 02:11:01,537 [wrapper] ==== pilot stdout END ====
[2026-01-07 21:11:01] 2026-01-08 02:11:01,542 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 21:11:01] 2026-01-08 02:11:01,547 [wrapper] pilotpid: 19808
[2026-01-07 21:11:01] 2026-01-08 02:11:01,551 [wrapper] Pilot exit status: 0
[2026-01-07 21:11:01] 2026-01-08 02:11:01,571 [wrapper] pandaids: 6962320534
[2026-01-07 21:11:01] 2026-01-08 02:11:01,615 [wrapper] cleanup supervisor_pilot 30905 19809
[2026-01-07 21:11:01] 2026-01-08 02:11:01,619 [wrapper] Test setup, not cleaning
[2026-01-07 21:11:01] 2026-01-08 02:11:01,624 [wrapper] apfmon messages muted
[2026-01-07 21:11:01] 2026-01-08 02:11:01,629 [wrapper] ==== wrapper stdout END ====
[2026-01-07 21:11:01] 2026-01-08 02:11:01,634 [wrapper] ==== wrapper stderr END ====
[2026-01-07 21:11:01]  *** Error codes and diagnostics ***
[2026-01-07 21:11:01]     "exeErrorCode": 0,
[2026-01-07 21:11:01]     "exeErrorDiag": "",
[2026-01-07 21:11:01]     "pilotErrorCode": 0,
[2026-01-07 21:11:01]     "pilotErrorDiag": "",
[2026-01-07 21:11:01]  *** Listing of results directory ***
[2026-01-07 21:11:01] total 441340
[2026-01-07 21:11:01] -rwx------ 1 boincer umatlas     36322 Jan  7 16:00 runpilot2-wrapper.sh
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 16:05 queuedata.json
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas       100 Jan  7 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 21:11:01] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 18:30 run_atlas
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas       105 Jan  7 18:30 job.xml
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas 223564334 Jan  7 18:30 EVNT.47898824._000673.pool.root.1
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 18:30 start_atlas.sh
[2026-01-07 21:11:01] drwxrwx--x 2 boincer umatlas      4096 Jan  7 18:30 shared
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas    592397 Jan  7 18:30 input.tar.gz
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas         0 Jan  7 18:30 boinc_lockfile
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas      2519 Jan  7 18:30 pandaJob.out
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas        57 Jan  7 18:30 setup.sh.local
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas    989785 Jan  7 18:30 agis_schedconf.cvmfs.json
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas   1516240 Jan  7 18:30 agis_ddmendpoints.agis.ALL.json
[2026-01-07 21:11:01] drwx------ 5 boincer umatlas      4096 Jan  7 18:30 pilot3
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas 221008173 Jan  7 21:09 HITS.47898826._014347.pool.root.1
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas      5909 Jan  7 21:09 init_data.xml
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas       530 Jan  7 21:09 boinc_task_state.xml
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas      1047 Jan  7 21:10 memory_monitor_summary.json
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas    387443 Jan  7 21:10 log.47898826._014347.job.log.tgz.1
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas      7846 Jan  7 21:10 heartbeat.json
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas      8192 Jan  7 21:10 boinc_mmap_file
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas        27 Jan  7 21:10 wrapper_checkpoint.txt
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas        95 Jan  7 21:11 pilot_heartbeat.json
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas       745 Jan  7 21:11 pilotlog.txt
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas   1337200 Jan  7 21:11 log.47898826._014347.job.log.1
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas       357 Jan  7 21:11 output.list
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas       620 Jan  7 21:11 runtime_log
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas   1740800 Jan  7 21:11 result.tar.gz
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas      9342 Jan  7 21:11 runtime_log.err
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas       660 Jan  7 21:11 6QBNDmhopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnpdKDmzU9Rum.diag
[2026-01-07 21:11:01] -rw-r--r-- 1 boincer umatlas     21394 Jan  7 21:11 stderr.txt
[2026-01-07 21:11:01] HITS file was successfully produced:
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas 221008173 Jan  7 21:09 shared/HITS.pool.root.1
[2026-01-07 21:11:01]  *** Contents of shared directory: ***
[2026-01-07 21:11:01] total 436460
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas 223564334 Jan  7 18:30 ATLAS.root_0
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 18:30 start_atlas.sh
[2026-01-07 21:11:01] -rw-r--r-- 2 boincer umatlas    592397 Jan  7 18:30 input.tar.gz
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas 221008173 Jan  7 21:09 HITS.pool.root.1
[2026-01-07 21:11:01] -rw------- 1 boincer umatlas   1740800 Jan  7 21:11 result.tar.gz
21:11:03 (16132): run_atlas exited; CPU time 71711.197832
21:11:03 (16132): called boinc_finish(0)

</stderr_txt>
]]>

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