Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:31 (2085228): wrapper (7.7.26015): starting
14:11:31 (2085228): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 14:11:31] Arguments: --nthreads 4
[2026-01-11 14:11:31] Threads: 4
[2026-01-11 14:11:31] Checking for CVMFS
[2026-01-11 14:11:31] No cvmfs_config command found, will try listing directly
[2026-01-11 14:11:31] CVMFS is ok
[2026-01-11 14:11:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 14:11:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 14:11:31] Further information can be found at the LHC@home message board.
[2026-01-11 14:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 14:11:31] Checking for apptainer binary...
[2026-01-11 14:11:31] which: no apptainer in ((null))
[2026-01-11 14:11:31] apptainer is not installed, using version from CVMFS
[2026-01-11 14:11:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 14:11:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-11 14:11:31] apptainer works
[2026-01-11 14:11:31] Set ATHENA_PROC_NUMBER=4
[2026-01-11 14:11:31] Set ATHENA_CORE_NUMBER=4
[2026-01-11 14:11:31] Starting ATLAS job with PandaID=6962319882
[2026-01-11 14:11:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 18:04:29]  *** The last 200 lines of the pilot log: ***
[2026-01-11 18:04:29] 2026-01-11 17:02:59,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 18:04:29] 2026-01-11 17:02:59,669 | INFO     | time since job start (13877s) is within the limit (174528.0s)
[2026-01-11 18:04:29] 2026-01-11 17:03:01,537 | INFO     | monitor loop #1009: job 0:6962319882 is in state 'finished'
[2026-01-11 18:04:29] 2026-01-11 17:03:01,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 18:04:29] 2026-01-11 17:03:01,674 | INFO     | time since job start (13879s) is within the limit (174528.0s)
[2026-01-11 18:04:29] 2026-01-11 17:03:03,681 | INFO     | time since job start (13881s) is within the limit (174528.0s)
[2026-01-11 18:04:29] 2026-01-11 17:03:04,040 | INFO     | monitor loop #1010: job 0:6962319882 is in state 'finished'
[2026-01-11 18:04:29] 2026-01-11 17:03:04,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,086 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 18:04:29] 2026-01-11 17:03:05,096 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2582.099187499999
[2026-01-11 18:04:29] 2026-01-11 17:03:05,108 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962319882/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,109 | INFO     | extracted standard info from prmon json
[2026-01-11 18:04:29] 2026-01-11 17:03:05,109 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 18:04:29] 2026-01-11 17:03:05,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 18:04:29] 2026-01-11 17:03:05,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 18:04:29] 2026-01-11 17:03:05,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 18:04:29] 2026-01-11 17:03:05,114 | INFO     | fitting pss+swap vs Time
[2026-01-11 18:04:29] 2026-01-11 17:03:05,114 | INFO     | sum of square deviations: 3627000098.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,116 | INFO     | sum of deviations: 13490247233.999998
[2026-01-11 18:04:29] 2026-01-11 17:03:05,116 | INFO     | mean x: 1768144023.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,116 | INFO     | mean y: 2359310.4669603524
[2026-01-11 18:04:29] 2026-01-11 17:03:05,116 | INFO     | intersect: -6574067315.146376
[2026-01-11 18:04:29] 2026-01-11 17:03:05,117 | INFO     | chi2: 1.3704588463442346
[2026-01-11 18:04:29] 2026-01-11 17:03:05,117 | INFO     | sum of square deviations: 3392567795.5
[2026-01-11 18:04:29] 2026-01-11 17:03:05,119 | INFO     | sum of deviations: 13347098534.000021
[2026-01-11 18:04:29] 2026-01-11 17:03:05,119 | INFO     | mean x: 1768143870.5
[2026-01-11 18:04:29] 2026-01-11 17:03:05,119 | INFO     | mean y: 2359217.3333333335
[2026-01-11 18:04:29] 2026-01-11 17:03:05,119 | INFO     | intersect: -6953902789.620472
[2026-01-11 18:04:29] 2026-01-11 17:03:05,119 | INFO     | chi2: 1.3710923868536766
[2026-01-11 18:04:29] 2026-01-11 17:03:05,120 | INFO     | current chi2=1.3710923868536766 (change=-0.04622834980648829 %)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,120 | INFO     | right removable region: 221
[2026-01-11 18:04:29] 2026-01-11 17:03:05,120 | INFO     | sum of square deviations: 3392567795.5
[2026-01-11 18:04:29] 2026-01-11 17:03:05,121 | INFO     | sum of deviations: -18731248162.000004
[2026-01-11 18:04:29] 2026-01-11 17:03:05,122 | INFO     | mean x: 1768144175.5
[2026-01-11 18:04:29] 2026-01-11 17:03:05,122 | INFO     | mean y: 2380093.207207207
[2026-01-11 18:04:29] 2026-01-11 17:03:05,122 | INFO     | intersect: 9764763436.412937
[2026-01-11 18:04:29] 2026-01-11 17:03:05,122 | INFO     | chi2: 0.051608076216008485
[2026-01-11 18:04:29] 2026-01-11 17:03:05,122 | INFO     | current chi2=0.051608076216008485 (change=96.23424837938947 %)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,123 | INFO     | sum of square deviations: 3168461268.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,124 | INFO     | sum of deviations: -18934754470.999996
[2026-01-11 18:04:29] 2026-01-11 17:03:05,124 | INFO     | mean x: 1768144328.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,124 | INFO     | mean y: 2380212.465437788
[2026-01-11 18:04:29] 2026-01-11 17:03:05,124 | INFO     | intersect: 10568827420.798895
[2026-01-11 18:04:29] 2026-01-11 17:03:05,125 | INFO     | chi2: 0.04536134637365813
[2026-01-11 18:04:29] 2026-01-11 17:03:05,125 | INFO     | current chi2=0.04536134637365813 (change=12.104171091757653 %)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,125 | INFO     | left removable region: 20
[2026-01-11 18:04:29] 2026-01-11 17:03:05,125 | INFO     | sum of square deviations: 2518000700.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | sum of deviations: -12516059970.999998
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | mean x: 1768144450.0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | mean y: 2376219.726368159
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | intersect: 8791175195.672169
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | chi2: 0.0388589403003133
[2026-01-11 18:04:29] 2026-01-11 17:03:05,127 | INFO     | current memory leak: -4.97 B/s (using 201 data points, chi2=0.04)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,128 | INFO     | could have reported an average CPU frequency of 2518 MHz (11 samples)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,128 | INFO     | ..............................
[2026-01-11 18:04:29] 2026-01-11 17:03:05,128 | INFO     | . Timing measurements:
[2026-01-11 18:04:29] 2026-01-11 17:03:05,128 | INFO     | . get job = 0 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,128 | INFO     | . initial setup = 1 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | . payload setup = 6 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | . stage-in = 0 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | . payload execution = 13845 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | . stage-out = 1 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | . log creation = 0 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,129 | INFO     | ..............................
[2026-01-11 18:04:29] 2026-01-11 17:03:05,674 | INFO     | 
[2026-01-11 18:04:29] 2026-01-11 17:03:05,674 | INFO     | job summary report
[2026-01-11 18:04:29] 2026-01-11 17:03:05,674 | INFO     | --------------------------------------------------
[2026-01-11 18:04:29] 2026-01-11 17:03:05,674 | INFO     | PanDA job id: 6962319882
[2026-01-11 18:04:29] 2026-01-11 17:03:05,674 | INFO     | task id: 47898826
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | errors: (none)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | pilot state: finished 
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | transexitcode: 0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | exeerrorcode: 0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | exeerrordiag: 
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | exitcode: 0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | exitmsg: OK
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | cpuconsumptiontime: 53577 s
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | nevents: 400
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | neventsw: 0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,675 | INFO     | pid: 2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | pgrp: 2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | corecount: 4
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | event service: False
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | sizes: {0: 2283866, 1: 2284008, 5: 2284270, 11: 2284326, 13856: 2314762, 13858: 2323782, 13859: 2323966, 13866: 2324160}
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | --------------------------------------------------
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | 
[2026-01-11 18:04:29] 2026-01-11 17:03:05,676 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 18:04:29] 2026-01-11 17:03:05,687 | INFO     | time since job start (13883s) is within the limit (174528.0s)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,698 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 18:04:29] 2026-01-11 17:03:05,702 | INFO     | job 6962319882 has completed (purged errors)
[2026-01-11 18:04:29] 2026-01-11 17:03:05,702 | INFO     | overall cleanup function is called
[2026-01-11 18:04:29] 2026-01-11 17:03:06,710 | INFO     | --- collectZombieJob: --- 10, [2096194]
[2026-01-11 18:04:29] 2026-01-11 17:03:06,710 | INFO     | zombie collector waiting for pid 2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:06,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 18:04:29] 2026-01-11 17:03:06,710 | INFO     | collected zombie processes
[2026-01-11 18:04:29] 2026-01-11 17:03:06,710 | INFO     | will attempt to kill all subprocesses of pid=2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:07,107 | INFO     | process IDs to be killed: [2096194] (in reverse order)
[2026-01-11 18:04:29] 2026-01-11 17:03:07,221 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 18:04:29] 2026-01-11 17:03:07,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 18:04:29] 2026-01-11 17:03:07,234 | INFO     | did not find any defunct processes belonging to 2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:07,246 | INFO     | did not find any defunct processes belonging to 2096194
[2026-01-11 18:04:29] 2026-01-11 17:03:07,246 | INFO     | ready for new job
[2026-01-11 18:04:29] 2026-01-11 17:03:07,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 18:04:29] 2026-01-11 17:03:07,249 | INFO     | ***************************************
[2026-01-11 18:04:29] 2026-01-11 17:03:07,249 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 18:04:29] 2026-01-11 17:03:07,249 | INFO     | ***************************************
[2026-01-11 18:04:29] 2026-01-11 17:03:07,249 | INFO     | 
[2026-01-11 18:04:29] 2026-01-11 17:03:07,252 | INFO     | architecture information:
[2026-01-11 18:04:29] 2026-01-11 17:03:07,253 | INFO     | executing command: cat /etc/os-release
[2026-01-11 18:04:29] 2026-01-11 17:03:07,269 | INFO     | cat /etc/os-release:
[2026-01-11 18:04:29] NAME="CentOS Linux"
[2026-01-11 18:04:29] VERSION="7 (Core)"
[2026-01-11 18:04:29] ID="centos"
[2026-01-11 18:04:29] ID_LIKE="rhel fedora"
[2026-01-11 18:04:29] VERSION_ID="7"
[2026-01-11 18:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 18:04:29] ANSI_COLOR="0;31"
[2026-01-11 18:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 18:04:29] HOME_URL="https://www.centos.org/"
[2026-01-11 18:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 18:04:29] 
[2026-01-11 18:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 18:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 18:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 18:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 18:04:29] 
[2026-01-11 18:04:29] 2026-01-11 17:03:07,270 | INFO     | ***************************************
[2026-01-11 18:04:29] 2026-01-11 17:03:07,772 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 18:04:29] 2026-01-11 17:03:07,789 | INFO     | sufficient remaining disk space (700398436352 B)
[2026-01-11 18:04:29] 2026-01-11 17:03:07,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 18:04:29] 2026-01-11 17:03:07,790 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 18:04:29] 2026-01-11 17:03:07,790 | INFO     | update_server=False
[2026-01-11 18:04:29] 2026-01-11 17:03:07,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 18:04:29] 2026-01-11 17:03:07,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 18:04:29] 2026-01-11 17:03:07,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 18:04:29] 2026-01-11 17:03:07,791 | INFO     | aborting loop
[2026-01-11 18:04:29] 2026-01-11 17:03:07,863 | INFO     | all data control threads have been joined
[2026-01-11 18:04:29] 2026-01-11 17:03:08,465 | INFO     | all job control threads have been joined
[2026-01-11 18:04:29] 2026-01-11 17:03:08,670 | INFO     | all payload control threads have been joined
[2026-01-11 18:04:29] 2026-01-11 17:03:08,795 | INFO     | [job] retrieve thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:08,796 | INFO     | [job] job monitor thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:08,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 18:04:29] 2026-01-11 17:03:08,868 | INFO     | [data] control thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,029 | INFO     | [data] copytool_in thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,335 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,471 | INFO     | [job] control thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,675 | INFO     | [payload] control thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,708 | INFO     | [job] validate thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,796 | INFO     | [data] copytool_out thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:09,943 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:10,106 | INFO     | [payload] failed_post thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:10,128 | INFO     | [payload] validate_post thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:10,205 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:10,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 18:04:29] 2026-01-11 17:03:11,241 | INFO     | [job] queue monitor thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:12,859 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 18:04:29] 2026-01-11 17:03:39,236 | INFO     | PID=2089041 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 18:04:29] 2026-01-11 17:03:39,237 | INFO     | .. there are 2 such processes running
[2026-01-11 18:04:29] 2026-01-11 17:03:39,237 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 18:04:29] 2026-01-11 17:03:39,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 18:04:29] 2026-01-11 17:03:39,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 18:04:29] 2026-01-11 17:04:03,474 | INFO     | [monitor] cgroup control has ended
[2026-01-11 18:04:29] 2026-01-11 17:04:03,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22957455165248)>', '<ExcThread(monitor, started 22957216724736)>']
[2026-01-11 18:04:29] 2026-01-11 17:04:04,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 18:04:29] 2026-01-11 17:04:04,349 | INFO     | [monitor] control thread has ended
[2026-01-11 18:04:29] 2026-01-11 17:04:08,523 | INFO     | all workflow threads have been joined
[2026-01-11 18:04:29] 2026-01-11 17:04:08,524 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 18:04:29] 2026-01-11 17:04:08,524 | INFO     | traces error code: 0
[2026-01-11 18:04:29] 2026-01-11 17:04:08,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 18:04:29] 2026-01-11 17:04:08,693 [wrapper] ==== pilot stdout END ====
[2026-01-11 18:04:29] 2026-01-11 17:04:08,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 18:04:29] 2026-01-11 17:04:08,699 [wrapper] pilotpid: 2089041
[2026-01-11 18:04:29] 2026-01-11 17:04:08,701 [wrapper] Pilot exit status: 0
[2026-01-11 18:04:29] 2026-01-11 17:04:08,711 [wrapper] pandaids: 6962319882
[2026-01-11 18:04:29] 2026-01-11 17:04:08,788 [wrapper] cleanup supervisor_pilot 2251310 2089042
[2026-01-11 18:04:29] 2026-01-11 17:04:08,791 [wrapper] Test setup, not cleaning
[2026-01-11 18:04:29] 2026-01-11 17:04:08,794 [wrapper] apfmon messages muted
[2026-01-11 18:04:29] 2026-01-11 17:04:08,796 [wrapper] ==== wrapper stdout END ====
[2026-01-11 18:04:29] 2026-01-11 17:04:08,799 [wrapper] ==== wrapper stderr END ====
[2026-01-11 18:04:29]  *** Error codes and diagnostics ***
[2026-01-11 18:04:29]     "exeErrorCode": 0,
[2026-01-11 18:04:29]     "exeErrorDiag": "",
[2026-01-11 18:04:29]     "pilotErrorCode": 0,
[2026-01-11 18:04:29]     "pilotErrorDiag": "",
[2026-01-11 18:04:29]  *** Listing of results directory ***
[2026-01-11 18:04:29] total 442504
[2026-01-11 18:04:29] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:04 queuedata.json
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc       100 Jan 11 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 18:04:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 14:11 run_atlas
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc       105 Jan 11 14:11 job.xml
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc 222924007 Jan 11 14:11 EVNT.47898824._000595.pool.root.1
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc      6637 Jan 11 14:11 init_data.xml
[2026-01-11 18:04:29] drwxrwx--x 2 boinc boinc      4096 Jan 11 14:11 shared
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc    592392 Jan 11 14:11 input.tar.gz
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc     15847 Jan 11 14:11 start_atlas.sh
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc         0 Jan 11 14:11 boinc_lockfile
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc      2519 Jan 11 14:11 pandaJob.out
[2026-01-11 18:04:29] -rw------- 1 boinc boinc    989548 Jan 11 14:11 agis_schedconf.cvmfs.json
[2026-01-11 18:04:29] drwx------ 5 boinc boinc      4096 Jan 11 14:11 pilot3
[2026-01-11 18:04:29] -rw------- 1 boinc boinc 221578772 Jan 11 18:02 HITS.47898826._013733.pool.root.1
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc       528 Jan 11 18:02 boinc_task_state.xml
[2026-01-11 18:04:29] -rw------- 1 boinc boinc      1032 Jan 11 18:02 memory_monitor_summary.json
[2026-01-11 18:04:29] -rw------- 1 boinc boinc   1516240 Jan 11 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 18:04:29] -rw------- 1 boinc boinc    404091 Jan 11 18:02 log.47898826._013733.job.log.tgz.1
[2026-01-11 18:04:29] -rw------- 1 boinc boinc        95 Jan 11 18:03 pilot_heartbeat.json
[2026-01-11 18:04:29] -rw------- 1 boinc boinc      7829 Jan 11 18:03 heartbeat.json
[2026-01-11 18:04:29] -rw------- 1 boinc boinc      4833 Jan 11 18:04 pilotlog.txt
[2026-01-11 18:04:29] -rw------- 1 boinc boinc   1949660 Jan 11 18:04 log.47898826._013733.job.log.1
[2026-01-11 18:04:29] -rw------- 1 boinc boinc       357 Jan 11 18:04 output.list
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc       620 Jan 11 18:04 runtime_log
[2026-01-11 18:04:29] -rw------- 1 boinc boinc   2375680 Jan 11 18:04 result.tar.gz
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc      9206 Jan 11 18:04 runtime_log.err
[2026-01-11 18:04:29] -rw------- 1 boinc boinc       665 Jan 11 18:04 9w4MDm7npx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTtiKDmtVguWm.diag
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc        26 Jan 11 18:04 wrapper_checkpoint.txt
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc      8192 Jan 11 18:04 boinc_mmap_file
[2026-01-11 18:04:29] -rw-r--r-- 1 boinc boinc     21154 Jan 11 18:04 stderr.txt
[2026-01-11 18:04:29] HITS file was successfully produced:
[2026-01-11 18:04:29] -rw------- 1 boinc boinc 221578772 Jan 11 18:02 shared/HITS.pool.root.1
[2026-01-11 18:04:29]  *** Contents of shared directory: ***
[2026-01-11 18:04:29] total 437012
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc 222924007 Jan 11 14:11 ATLAS.root_0
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc    592392 Jan 11 14:11 input.tar.gz
[2026-01-11 18:04:29] -rw-r--r-- 2 boinc boinc     15847 Jan 11 14:11 start_atlas.sh
[2026-01-11 18:04:29] -rw------- 1 boinc boinc 221578772 Jan 11 18:02 HITS.pool.root.1
[2026-01-11 18:04:29] -rw------- 1 boinc boinc   2375680 Jan 11 18:04 result.tar.gz
18:04:31 (2085228): run_atlas exited; CPU time 54219.373517
18:04:31 (2085228): called boinc_finish(0)

</stderr_txt>
]]>

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