Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:51:44 (21944): wrapper (7.7.26015): starting
05:51:44 (21944): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:51:44] Arguments: --nthreads 8
[2026-01-08 05:51:44] Threads: 8
[2026-01-08 05:51:44] Checking for CVMFS
[2026-01-08 05:51:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:51:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:51:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:51:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:51:48] 2.11.2.0 23910 33519 124736 154891 3 61 15724539 25165824 899 130560 0 14904271 99.787 11420551 3990 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 05:51:48] CVMFS is ok
[2026-01-08 05:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:51:48] Checking for apptainer binary...
[2026-01-08 05:51:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:51:48] Running /usr/bin/apptainer --version
[2026-01-08 05:51:48] apptainer version 1.3.2-1.el7
[2026-01-08 05:51:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:51:59] cg-vwn369.simple-grid.lan
[2026-01-08 05:51:59] apptainer works
[2026-01-08 05:51:59] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:51:59] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:51:59] Starting ATLAS job with PandaID=6962319875
[2026-01-08 05:51:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 12:09:00]  *** The last 200 lines of the pilot log: ***
[2026-01-08 12:09:00] 2026-01-08 11:08:09,642 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962319875/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,642 | INFO     | extracted standard info from prmon json
[2026-01-08 12:09:00] 2026-01-08 11:08:09,643 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 12:09:00] 2026-01-08 11:08:09,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 12:09:00] 2026-01-08 11:08:09,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 12:09:00] 2026-01-08 11:08:09,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 12:09:00] 2026-01-08 11:08:09,651 | INFO     | fitting pss+swap vs Time
[2026-01-08 12:09:00] 2026-01-08 11:08:09,652 | INFO     | sum of square deviations: 13990234405.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,656 | INFO     | sum of deviations: 194471573318.99997
[2026-01-08 12:09:00] 2026-01-08 11:08:09,657 | INFO     | mean x: 1767859533.5
[2026-01-08 12:09:00] 2026-01-08 11:08:09,657 | INFO     | mean y: 2433612.6235955055
[2026-01-08 12:09:00] 2026-01-08 11:08:09,657 | INFO     | intersect: -24571738265.71659
[2026-01-08 12:09:00] 2026-01-08 11:08:09,658 | INFO     | chi2: 10.312200768027246
[2026-01-08 12:09:00] 2026-01-08 11:08:09,658 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,663 | INFO     | sum of deviations: 239951124572.99994
[2026-01-08 12:09:00] 2026-01-08 11:08:09,663 | INFO     | mean x: 1767859381.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,663 | INFO     | mean y: 2445437.4017094015
[2026-01-08 12:09:00] 2026-01-08 11:08:09,663 | INFO     | intersect: -31633022215.214832
[2026-01-08 12:09:00] 2026-01-08 11:08:09,664 | INFO     | chi2: 8.781569383570599
[2026-01-08 12:09:00] 2026-01-08 11:08:09,664 | INFO     | current chi2=8.781569383570599 (change=14.842916840819631 %)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,664 | INFO     | right removable region: 350
[2026-01-08 12:09:00] 2026-01-08 11:08:09,665 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,668 | INFO     | sum of deviations: 70383648971.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,669 | INFO     | mean x: 1767859686.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,669 | INFO     | mean y: 2466155.017094017
[2026-01-08 12:09:00] 2026-01-08 11:08:09,669 | INFO     | intersect: -9277007064.394379
[2026-01-08 12:09:00] 2026-01-08 11:08:09,670 | INFO     | chi2: 5.397771527215124
[2026-01-08 12:09:00] 2026-01-08 11:08:09,670 | INFO     | current chi2=5.397771527215124 (change=47.65645424640299 %)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,670 | INFO     | sum of square deviations: 12844082682.5
[2026-01-08 12:09:00] 2026-01-08 11:08:09,675 | INFO     | sum of deviations: -31894970844.499992
[2026-01-08 12:09:00] 2026-01-08 11:08:09,675 | INFO     | mean x: 1767859838.5
[2026-01-08 12:09:00] 2026-01-08 11:08:09,675 | INFO     | mean y: 2493754.014450867
[2026-01-08 12:09:00] 2026-01-08 11:08:09,675 | INFO     | intersect: 4392518281.258066
[2026-01-08 12:09:00] 2026-01-08 11:08:09,676 | INFO     | chi2: 2.266008938839158
[2026-01-08 12:09:00] 2026-01-08 11:08:09,676 | INFO     | current chi2=2.266008938839158 (change=58.01954700353422 %)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,676 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,680 | INFO     | sum of deviations: -68498445069.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,681 | INFO     | mean x: 1767859991.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,681 | INFO     | mean y: 2503878.794721408
[2026-01-08 12:09:00] 2026-01-08 11:08:09,681 | INFO     | intersect: 9851472509.786116
[2026-01-08 12:09:00] 2026-01-08 11:08:09,681 | INFO     | chi2: 1.7216228647871672
[2026-01-08 12:09:00] 2026-01-08 11:08:09,682 | INFO     | current chi2=1.7216228647871672 (change=24.024003821047224 %)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,682 | INFO     | left removable region: 30
[2026-01-08 12:09:00] 2026-01-08 11:08:09,682 | INFO     | sum of square deviations: 10160711440.0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,686 | INFO     | sum of deviations: -21898053036.000004
[2026-01-08 12:09:00] 2026-01-08 11:08:09,686 | INFO     | mean x: 1767860265.5
[2026-01-08 12:09:00] 2026-01-08 11:08:09,686 | INFO     | mean y: 2517426.20625
[2026-01-08 12:09:00] 2026-01-08 11:08:09,686 | INFO     | intersect: 3812555540.4424763
[2026-01-08 12:09:00] 2026-01-08 11:08:09,687 | INFO     | chi2: 0.034579206024018115
[2026-01-08 12:09:00] 2026-01-08 11:08:09,687 | INFO     | current memory leak: -2.16 B/s (using 320 data points, chi2=0.03)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | ..............................
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | . Timing measurements:
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | . get job = 0 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | . initial setup = 12 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,688 | INFO     | . payload setup = 145 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,689 | INFO     | . stage-in = 0 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,689 | INFO     | . payload execution = 21832 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,689 | INFO     | . stage-out = 4 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,689 | INFO     | . log creation = 1 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,689 | INFO     | ..............................
[2026-01-08 12:09:00] 2026-01-08 11:08:09,810 | INFO     | 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | job summary report
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | --------------------------------------------------
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | PanDA job id: 6962319875
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | task id: 47898826
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | errors: (none)
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | pilot state: finished 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | transexitcode: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,811 | INFO     | exeerrorcode: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | exeerrordiag: 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | exitcode: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | exitmsg: OK
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | cpuconsumptiontime: 81841 s
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | nevents: 400
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | neventsw: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | pid: 32204
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | pgrp: 32204
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | corecount: 8
[2026-01-08 12:09:00] 2026-01-08 11:08:09,812 | INFO     | event service: False
[2026-01-08 12:09:00] 2026-01-08 11:08:09,813 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 44: 2284081, 55: 2284237, 66: 2284265, 77: 2284293, 87: 2284349, 98: 2284377, 109: 2284685, 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,813 | INFO     | --------------------------------------------------
[2026-01-08 12:09:00] 2026-01-08 11:08:09,813 | INFO     | 
[2026-01-08 12:09:00] 2026-01-08 11:08:09,813 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 12:09:00] 2026-01-08 11:08:10,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | job 6962319875 has completed (purged errors)
[2026-01-08 12:09:00] 2026-01-08 11:08:10,029 | INFO     | overall cleanup function is called
[2026-01-08 12:09:00] 2026-01-08 11:08:11,039 | INFO     | --- collectZombieJob: --- 10, [32204]
[2026-01-08 12:09:00] 2026-01-08 11:08:11,039 | INFO     | zombie collector waiting for pid 32204
[2026-01-08 12:09:00] 2026-01-08 11:08:11,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 12:09:00] 2026-01-08 11:08:11,039 | INFO     | collected zombie processes
[2026-01-08 12:09:00] 2026-01-08 11:08:11,039 | INFO     | will attempt to kill all subprocesses of pid=32204
[2026-01-08 12:09:00] 2026-01-08 11:08:11,111 | INFO     | process IDs to be killed: [32204] (in reverse order)
[2026-01-08 12:09:00] 2026-01-08 11:08:11,834 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 12:09:00] 2026-01-08 11:08:11,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 12:09:00] 2026-01-08 11:08:11,836 | INFO     | did not find any defunct processes belonging to 32204
[2026-01-08 12:09:00] 2026-01-08 11:08:11,838 | INFO     | did not find any defunct processes belonging to 32204
[2026-01-08 12:09:00] 2026-01-08 11:08:11,839 | INFO     | ready for new job
[2026-01-08 12:09:00] 2026-01-08 11:08:11,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 12:09:00] 2026-01-08 11:08:11,841 | INFO     | ***************************************
[2026-01-08 12:09:00] 2026-01-08 11:08:11,842 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 12:09:00] 2026-01-08 11:08:11,842 | INFO     | ***************************************
[2026-01-08 12:09:00] 2026-01-08 11:08:11,842 | INFO     | 
[2026-01-08 12:09:00] 2026-01-08 11:08:11,842 | INFO     | pilot is running in a VM
[2026-01-08 12:09:00] 2026-01-08 11:08:11,843 | INFO     | architecture information:
[2026-01-08 12:09:00] 2026-01-08 11:08:11,843 | INFO     | executing command: cat /etc/os-release
[2026-01-08 12:09:00] 2026-01-08 11:08:12,078 | INFO     | cat /etc/os-release:
[2026-01-08 12:09:00] NAME="CentOS Linux"
[2026-01-08 12:09:00] VERSION="7 (Core)"
[2026-01-08 12:09:00] ID="centos"
[2026-01-08 12:09:00] ID_LIKE="rhel fedora"
[2026-01-08 12:09:00] VERSION_ID="7"
[2026-01-08 12:09:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 12:09:00] ANSI_COLOR="0;31"
[2026-01-08 12:09:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 12:09:00] HOME_URL="https://www.centos.org/"
[2026-01-08 12:09:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 12:09:00] 
[2026-01-08 12:09:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 12:09:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 12:09:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 12:09:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 12:09:00] 
[2026-01-08 12:09:00] 2026-01-08 11:08:12,078 | INFO     | ***************************************
[2026-01-08 12:09:00] 2026-01-08 11:08:12,581 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 12:09:00] 2026-01-08 11:08:12,829 | INFO     | sufficient remaining disk space (497267245056 B)
[2026-01-08 12:09:00] 2026-01-08 11:08:12,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 12:09:00] 2026-01-08 11:08:12,830 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 12:09:00] 2026-01-08 11:08:12,830 | INFO     | update_server=False
[2026-01-08 12:09:00] 2026-01-08 11:08:12,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 12:09:00] 2026-01-08 11:08:12,930 | INFO     | all payload control threads have been joined
[2026-01-08 12:09:00] 2026-01-08 11:08:12,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 12:09:00] 2026-01-08 11:08:13,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 12:09:00] 2026-01-08 11:08:13,308 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 12:09:00] 2026-01-08 11:08:13,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:09:00] 2026-01-08 11:08:13,308 | INFO     | will abort loop
[2026-01-08 12:09:00] 2026-01-08 11:08:13,462 | INFO     | all data control threads have been joined
[2026-01-08 12:09:00] 2026-01-08 11:08:13,836 | INFO     | [job] retrieve thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:13,927 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:13,936 | INFO     | [payload] control thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,007 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,187 | INFO     | all job control threads have been joined
[2026-01-08 12:09:00] 2026-01-08 11:08:14,236 | INFO     | [data] copytool_in thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,260 | INFO     | [job] validate thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,314 | INFO     | [job] job monitor thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,468 | INFO     | [data] control thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,785 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:14,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:09:00] 2026-01-08 11:08:14,987 | INFO     | [data] copytool_out thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:15,115 | INFO     | [payload] failed_post thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:15,194 | INFO     | [job] control thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:15,202 | INFO     | [payload] validate_post thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:15,830 | INFO     | [job] queue monitor thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:16,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 12:09:00] 2026-01-08 11:08:20,212 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:23,196 | INFO     | job.realtimelogging is not enabled
[2026-01-08 12:09:00] 2026-01-08 11:08:24,202 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 12:09:00] 2026-01-08 11:08:41,300 | INFO     | PID=25704 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 12:09:00] 2026-01-08 11:08:41,301 | INFO     | .. there are 2 such processes running
[2026-01-08 12:09:00] 2026-01-08 11:08:41,301 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 12:09:00] 2026-01-08 11:08:41,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 12:09:00] 2026-01-08 11:08:41,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 12:09:00] 2026-01-08 11:08:48,232 | INFO     | [monitor] cgroup control has ended
[2026-01-08 12:09:00] 2026-01-08 11:08:49,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823754049344)>', '<ExcThread(monitor, started 139823172011776)>']
[2026-01-08 12:09:00] 2026-01-08 11:08:50,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 12:09:00] 2026-01-08 11:08:50,355 | INFO     | [monitor] control thread has ended
[2026-01-08 12:09:00] 2026-01-08 11:08:54,491 | INFO     | all workflow threads have been joined
[2026-01-08 12:09:00] 2026-01-08 11:08:54,491 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 12:09:00] 2026-01-08 11:08:54,491 | INFO     | traces error code: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:54,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 12:09:00] 2026-01-08 11:08:55,050 [wrapper] ==== pilot stdout END ====
[2026-01-08 12:09:00] 2026-01-08 11:08:55,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 12:09:00] 2026-01-08 11:08:55,260 [wrapper] pilotpid: 25704
[2026-01-08 12:09:00] 2026-01-08 11:08:55,313 [wrapper] Pilot exit status: 0
[2026-01-08 12:09:00] 2026-01-08 11:08:55,853 [wrapper] pandaids: 6962319875
[2026-01-08 12:09:00] 2026-01-08 11:08:56,765 [wrapper] cleanup supervisor_pilot 31472 25705
[2026-01-08 12:09:00] 2026-01-08 11:08:56,872 [wrapper] Test setup, not cleaning
[2026-01-08 12:09:00] 2026-01-08 11:08:56,988 [wrapper] apfmon messages muted
[2026-01-08 12:09:00] 2026-01-08 11:08:57,087 [wrapper] ==== wrapper stdout END ====
[2026-01-08 12:09:00] 2026-01-08 11:08:57,203 [wrapper] ==== wrapper stderr END ====
[2026-01-08 12:09:00]  *** Error codes and diagnostics ***
[2026-01-08 12:09:00]     "exeErrorCode": 0,
[2026-01-08 12:09:00]     "exeErrorDiag": "",
[2026-01-08 12:09:00]     "pilotErrorCode": 0,
[2026-01-08 12:09:00]     "pilotErrorDiag": "",
[2026-01-08 12:09:00]  *** Listing of results directory ***
[2026-01-08 12:09:00] total 436796
[2026-01-08 12:09:00] -rwx------. 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:04 queuedata.json
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 12:09:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:51 run_atlas
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:51 job.xml
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc 222924007 Jan  8 05:51 EVNT.47898824._000595.pool.root.1
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc    592393 Jan  8 05:51 input.tar.gz
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc      6389 Jan  8 05:51 init_data.xml
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:51 start_atlas.sh
[2026-01-08 12:09:00] drwxrwx--x. 2 boinc boinc        68 Jan  8 05:51 shared
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:51 boinc_lockfile
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc      2519 Jan  8 05:51 pandaJob.out
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc    989835 Jan  8 05:56 agis_schedconf.cvmfs.json
[2026-01-08 12:09:00] drwx------. 5 boinc boinc      4096 Jan  8 05:56 pilot3
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc 213415002 Jan  8 12:04 HITS.47898826._013726.pool.root.1
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc       531 Jan  8 12:04 boinc_task_state.xml
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc      1013 Jan  8 12:06 memory_monitor_summary.json
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc   1516240 Jan  8 12:06 agis_ddmendpoints.agis.ALL.json
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc    558044 Jan  8 12:06 log.47898826._013726.job.log.tgz.1
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc        95 Jan  8 12:07 pilot_heartbeat.json
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc      7779 Jan  8 12:08 heartbeat.json
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc      8192 Jan  8 12:08 boinc_mmap_file
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc        28 Jan  8 12:08 wrapper_checkpoint.txt
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc      5142 Jan  8 12:08 pilotlog.txt
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc   2961244 Jan  8 12:08 log.47898826._013726.job.log.1
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc       357 Jan  8 12:08 output.list
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc       620 Jan  8 12:08 runtime_log
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc   3543040 Jan  8 12:08 result.tar.gz
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc      8817 Jan  8 12:08 runtime_log.err
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc       657 Jan  8 12:08 MEwMDm7npx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMtiKDmy34G5n.diag
[2026-01-08 12:09:00] -rw-r--r--. 1 boinc boinc     20761 Jan  8 12:09 stderr.txt
[2026-01-08 12:09:00] HITS file was successfully produced:
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc 213415002 Jan  8 12:04 shared/HITS.pool.root.1
[2026-01-08 12:09:00]  *** Contents of shared directory: ***
[2026-01-08 12:09:00] total 430172
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc 222924007 Jan  8 05:51 ATLAS.root_0
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc    592393 Jan  8 05:51 input.tar.gz
[2026-01-08 12:09:00] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:51 start_atlas.sh
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc 213415002 Jan  8 12:04 HITS.pool.root.1
[2026-01-08 12:09:00] -rw-------. 1 boinc boinc   3543040 Jan  8 12:08 result.tar.gz
12:09:01 (21944): run_atlas exited; CPU time 82058.878259
12:09:01 (21944): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN