Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:01 (29221): wrapper (7.7.26015): starting
00:31:01 (29221): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 00:31:01] Arguments: --nthreads 8
[2026-01-08 00:31:01] Threads: 8
[2026-01-08 00:31:01] Checking for CVMFS
[2026-01-08 00:31:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:31:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:31:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:31:06] 2.11.2.0 23910 33199 101056 154884 3 53 13918934 25165824 942 130560 0 14749120 99.806 10772070 4073 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 00:31:06] CVMFS is ok
[2026-01-08 00:31:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:31:06] Checking for apptainer binary...
[2026-01-08 00:31:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:31:06] Running /usr/bin/apptainer --version
[2026-01-08 00:31:06] apptainer version 1.3.2-1.el7
[2026-01-08 00:31:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:31:22] cg-vwn369.simple-grid.lan
[2026-01-08 00:31:22] apptainer works
[2026-01-08 00:31:22] Set ATHENA_PROC_NUMBER=8
[2026-01-08 00:31:22] Set ATHENA_CORE_NUMBER=8
[2026-01-08 00:31:22] Starting ATLAS job with PandaID=6962319828
[2026-01-08 00:31:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:51:38]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:51:38] 2026-01-08 04:50:43,317 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 05:51:38] 2026-01-08 04:50:43,319 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 05:51:38] 2026-01-08 04:50:43,321 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962319828/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,321 | INFO     | extracted standard info from prmon json
[2026-01-08 05:51:38] 2026-01-08 04:50:43,322 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:51:38] 2026-01-08 04:50:43,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:51:38] 2026-01-08 04:50:43,322 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:51:38] 2026-01-08 04:50:43,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:51:38] 2026-01-08 04:50:43,332 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:51:38] 2026-01-08 04:50:43,333 | INFO     | sum of square deviations: 8288713550.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,344 | INFO     | sum of deviations: 138478304601.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,344 | INFO     | mean x: 1767838608.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,345 | INFO     | mean y: 2445512.8227424747
[2026-01-08 05:51:38] 2026-01-08 04:50:43,345 | INFO     | intersect: -29532571202.04875
[2026-01-08 05:51:38] 2026-01-08 04:50:43,345 | INFO     | chi2: 8.206301215812353
[2026-01-08 05:51:38] 2026-01-08 04:50:43,346 | INFO     | sum of square deviations: 7879803557.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,349 | INFO     | sum of deviations: 155396101727.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,349 | INFO     | mean x: 1767838455.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,349 | INFO     | mean y: 2451722.425170068
[2026-01-08 05:51:38] 2026-01-08 04:50:43,349 | INFO     | intersect: -34860752983.6351
[2026-01-08 05:51:38] 2026-01-08 04:50:43,350 | INFO     | chi2: 7.501833692153669
[2026-01-08 05:51:38] 2026-01-08 04:50:43,350 | INFO     | current chi2=7.501833692153669 (change=8.58447070284572 %)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,350 | INFO     | right removable region: 293
[2026-01-08 05:51:38] 2026-01-08 04:50:43,351 | INFO     | sum of square deviations: 7879803557.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,354 | INFO     | sum of deviations: 33430982808.49999
[2026-01-08 05:51:38] 2026-01-08 04:50:43,354 | INFO     | mean x: 1767838760.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,354 | INFO     | mean y: 2484670.350340136
[2026-01-08 05:51:38] 2026-01-08 04:50:43,354 | INFO     | intersect: -7497776824.64892
[2026-01-08 05:51:38] 2026-01-08 04:50:43,355 | INFO     | chi2: 3.248097756297546
[2026-01-08 05:51:38] 2026-01-08 04:50:43,355 | INFO     | current chi2=3.248097756297546 (change=60.419467054914676 %)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,355 | INFO     | sum of square deviations: 7484568240.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,358 | INFO     | sum of deviations: -38538906777.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,358 | INFO     | mean x: 1767838913.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,358 | INFO     | mean y: 2512392.5570934257
[2026-01-08 05:51:38] 2026-01-08 04:50:43,359 | INFO     | intersect: 9105319245.29547
[2026-01-08 05:51:38] 2026-01-08 04:50:43,359 | INFO     | chi2: 0.9994241169828234
[2026-01-08 05:51:38] 2026-01-08 04:50:43,359 | INFO     | current chi2=0.9994241169828234 (change=69.23047913058963 %)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,368 | INFO     | sum of square deviations: 7102775035.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,371 | INFO     | sum of deviations: -46381278538.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,371 | INFO     | mean x: 1767839065.5
[2026-01-08 05:51:38] 2026-01-08 04:50:43,371 | INFO     | mean y: 2515484.7429577466
[2026-01-08 05:51:38] 2026-01-08 04:50:43,371 | INFO     | intersect: 11546543798.205803
[2026-01-08 05:51:38] 2026-01-08 04:50:43,372 | INFO     | chi2: 0.9185307392298543
[2026-01-08 05:51:38] 2026-01-08 04:50:43,372 | INFO     | current chi2=0.9185307392298543 (change=8.093998971845842 %)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,372 | INFO     | left removable region: 30
[2026-01-08 05:51:38] 2026-01-08 04:50:43,373 | INFO     | sum of square deviations: 5640782972.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,375 | INFO     | sum of deviations: 990159990.9999994
[2026-01-08 05:51:38] 2026-01-08 04:50:43,375 | INFO     | mean x: 1767839340.0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,376 | INFO     | mean y: 2510607.676806084
[2026-01-08 05:51:38] 2026-01-08 04:50:43,376 | INFO     | intersect: -307808685.5264221
[2026-01-08 05:51:38] 2026-01-08 04:50:43,376 | INFO     | chi2: 0.03516319761660284
[2026-01-08 05:51:38] 2026-01-08 04:50:43,376 | INFO     | current memory leak: 0.18 B/s (using 263 data points, chi2=0.04)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,377 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,377 | INFO     | ..............................
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . Timing measurements:
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . get job = 0 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . initial setup = 11 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . payload setup = 162 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . stage-in = 0 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . payload execution = 18373 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . stage-out = 6 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | . log creation = 1 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,378 | INFO     | ..............................
[2026-01-08 05:51:38] 2026-01-08 04:50:43,643 | INFO     | 
[2026-01-08 05:51:38] 2026-01-08 04:50:43,643 | INFO     | job summary report
[2026-01-08 05:51:38] 2026-01-08 04:50:43,643 | INFO     | --------------------------------------------------
[2026-01-08 05:51:38] 2026-01-08 04:50:43,643 | INFO     | PanDA job id: 6962319828
[2026-01-08 05:51:38] 2026-01-08 04:50:43,643 | INFO     | task id: 47898826
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | errors: (none)
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | pilot state: finished 
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | transexitcode: 0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | exeerrorcode: 0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | exeerrordiag: 
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | exitcode: 0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | exitmsg: OK
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | cpuconsumptiontime: 81118 s
[2026-01-08 05:51:38] 2026-01-08 04:50:43,644 | INFO     | nevents: 400
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | neventsw: 0
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | pid: 7358
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | pgrp: 7358
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | corecount: 8
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | event service: False
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | sizes: {0: 2283141, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 88: 2284377, 98: 2284685, 10
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | --------------------------------------------------
[2026-01-08 05:51:38] 2026-01-08 04:50:43,645 | INFO     | 
[2026-01-08 05:51:38] 2026-01-08 04:50:43,646 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 05:51:38] 2026-01-08 04:50:44,316 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,316 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:51:38] 2026-01-08 04:50:44,319 | INFO     | job 6962319828 has completed (purged errors)
[2026-01-08 05:51:38] 2026-01-08 04:50:44,319 | INFO     | overall cleanup function is called
[2026-01-08 05:51:38] 2026-01-08 04:50:45,328 | INFO     | --- collectZombieJob: --- 10, [7358]
[2026-01-08 05:51:38] 2026-01-08 04:50:45,328 | INFO     | zombie collector waiting for pid 7358
[2026-01-08 05:51:38] 2026-01-08 04:50:45,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:51:38] 2026-01-08 04:50:45,328 | INFO     | collected zombie processes
[2026-01-08 05:51:38] 2026-01-08 04:50:45,328 | INFO     | will attempt to kill all subprocesses of pid=7358
[2026-01-08 05:51:38] 2026-01-08 04:50:45,428 | INFO     | process IDs to be killed: [7358] (in reverse order)
[2026-01-08 05:51:38] 2026-01-08 04:50:46,518 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:51:38] 2026-01-08 04:50:46,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:51:38] 2026-01-08 04:50:46,521 | INFO     | did not find any defunct processes belonging to 7358
[2026-01-08 05:51:38] 2026-01-08 04:50:46,523 | INFO     | did not find any defunct processes belonging to 7358
[2026-01-08 05:51:38] 2026-01-08 04:50:46,523 | INFO     | ready for new job
[2026-01-08 05:51:38] 2026-01-08 04:50:46,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:51:38] 2026-01-08 04:50:46,525 | INFO     | ***************************************
[2026-01-08 05:51:38] 2026-01-08 04:50:46,526 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:51:38] 2026-01-08 04:50:46,526 | INFO     | ***************************************
[2026-01-08 05:51:38] 2026-01-08 04:50:46,526 | INFO     | 
[2026-01-08 05:51:38] 2026-01-08 04:50:46,526 | INFO     | pilot is running in a VM
[2026-01-08 05:51:38] 2026-01-08 04:50:46,527 | INFO     | architecture information:
[2026-01-08 05:51:38] 2026-01-08 04:50:46,542 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:51:38] 2026-01-08 04:50:46,859 | INFO     | cat /etc/os-release:
[2026-01-08 05:51:38] NAME="CentOS Linux"
[2026-01-08 05:51:38] VERSION="7 (Core)"
[2026-01-08 05:51:38] ID="centos"
[2026-01-08 05:51:38] ID_LIKE="rhel fedora"
[2026-01-08 05:51:38] VERSION_ID="7"
[2026-01-08 05:51:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:51:38] ANSI_COLOR="0;31"
[2026-01-08 05:51:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:51:38] HOME_URL="https://www.centos.org/"
[2026-01-08 05:51:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:51:38] 
[2026-01-08 05:51:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:51:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:51:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:51:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:51:38] 
[2026-01-08 05:51:38] 2026-01-08 04:50:46,859 | INFO     | ***************************************
[2026-01-08 05:51:38] 2026-01-08 04:50:47,363 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 05:51:38] 2026-01-08 04:50:47,634 | INFO     | sufficient remaining disk space (497372102656 B)
[2026-01-08 05:51:38] 2026-01-08 04:50:47,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:51:38] 2026-01-08 04:50:47,635 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:51:38] 2026-01-08 04:50:47,635 | INFO     | update_server=False
[2026-01-08 05:51:38] 2026-01-08 04:50:47,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:51:38] 2026-01-08 04:50:47,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:51:38] 2026-01-08 04:50:47,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:51:38] 2026-01-08 04:50:47,642 | INFO     | aborting loop
[2026-01-08 05:51:38] 2026-01-08 04:50:47,987 | INFO     | all data control threads have been joined
[2026-01-08 05:51:38] 2026-01-08 04:50:48,169 | INFO     | all payload control threads have been joined
[2026-01-08 05:51:38] 2026-01-08 04:50:48,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:51:38] 2026-01-08 04:50:48,339 | INFO     | all job control threads have been joined
[2026-01-08 05:51:38] 2026-01-08 04:50:48,642 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:48,649 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:48,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:51:38] 2026-01-08 04:50:48,673 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:48,695 | INFO     | [job] validate thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:48,737 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:48,993 | INFO     | [data] control thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,101 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,173 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,175 | INFO     | [payload] control thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,345 | INFO     | [job] control thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,445 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,492 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:49,670 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:50,023 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:50,288 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:51,646 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:51:38] 2026-01-08 04:50:56,775 [wrapper] supervise_pilot (15 min periods counter: 22)
[2026-01-08 05:51:38] 2026-01-08 04:51:16,197 | INFO     | PID=860 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-08 05:51:38] 2026-01-08 04:51:16,198 | INFO     | .. there are 2 such processes running
[2026-01-08 05:51:38] 2026-01-08 04:51:16,200 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:51:38] 2026-01-08 04:51:16,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:51:38] 2026-01-08 04:51:16,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:51:38] 2026-01-08 04:51:28,209 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:51:38] 2026-01-08 04:51:29,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980466796352)>', '<ExcThread(monitor, started 139979871209216)>']
[2026-01-08 05:51:38] 2026-01-08 04:51:29,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:51:38] 2026-01-08 04:51:29,278 | INFO     | [monitor] control thread has ended
[2026-01-08 05:51:38] 2026-01-08 04:51:34,096 | INFO     | all workflow threads have been joined
[2026-01-08 05:51:38] 2026-01-08 04:51:34,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:51:38] 2026-01-08 04:51:34,096 | INFO     | traces error code: 0
[2026-01-08 05:51:38] 2026-01-08 04:51:34,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:51:38] 2026-01-08 04:51:34,468 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:51:38] 2026-01-08 04:51:34,587 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:51:38] 2026-01-08 04:51:34,651 [wrapper] pilotpid: 860
[2026-01-08 05:51:38] 2026-01-08 04:51:34,763 [wrapper] Pilot exit status: 0
[2026-01-08 05:51:38] 2026-01-08 04:51:35,210 [wrapper] pandaids: 6962319828
[2026-01-08 05:51:38] 2026-01-08 04:51:36,185 [wrapper] cleanup supervisor_pilot 21887 861
[2026-01-08 05:51:38] 2026-01-08 04:51:36,309 [wrapper] Test setup, not cleaning
[2026-01-08 05:51:38] 2026-01-08 04:51:36,423 [wrapper] apfmon messages muted
[2026-01-08 05:51:38] 2026-01-08 04:51:36,480 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:51:38] 2026-01-08 04:51:36,587 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:51:38]  *** Error codes and diagnostics ***
[2026-01-08 05:51:38]     "exeErrorCode": 0,
[2026-01-08 05:51:38]     "exeErrorDiag": "",
[2026-01-08 05:51:38]     "pilotErrorCode": 0,
[2026-01-08 05:51:38]     "pilotErrorDiag": "",
[2026-01-08 05:51:38]  *** Listing of results directory ***
[2026-01-08 05:51:38] total 445004
[2026-01-08 05:51:38] -rwx------. 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:04 queuedata.json
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc       100 Jan  8 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:51:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 00:30 run_atlas
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc       105 Jan  8 00:30 job.xml
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc      6389 Jan  8 00:31 init_data.xml
[2026-01-08 05:51:38] -rw-r--r--. 2 boinc boinc 227189169 Jan  8 00:31 EVNT.47898824._000593.pool.root.1
[2026-01-08 05:51:38] -rw-r--r--. 2 boinc boinc     15847 Jan  8 00:31 start_atlas.sh
[2026-01-08 05:51:38] drwxrwx--x. 2 boinc boinc        68 Jan  8 00:31 shared
[2026-01-08 05:51:38] -rw-r--r--. 2 boinc boinc    592392 Jan  8 00:31 input.tar.gz
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc         0 Jan  8 00:31 boinc_lockfile
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc      2519 Jan  8 00:31 pandaJob.out
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc    989785 Jan  8 00:35 agis_schedconf.cvmfs.json
[2026-01-08 05:51:38] drwx------. 5 boinc boinc      4096 Jan  8 00:35 pilot3
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc 218547262 Jan  8 05:47 HITS.47898826._013679.pool.root.1
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc       531 Jan  8 05:47 boinc_task_state.xml
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc      1021 Jan  8 05:48 memory_monitor_summary.json
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc   1516240 Jan  8 05:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc    515661 Jan  8 05:48 log.47898826._013679.job.log.tgz.1
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc      7783 Jan  8 05:50 heartbeat.json
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc        95 Jan  8 05:51 pilot_heartbeat.json
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:51 boinc_mmap_file
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc        28 Jan  8 05:51 wrapper_checkpoint.txt
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc      4882 Jan  8 05:51 pilotlog.txt
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc   2508473 Jan  8 05:51 log.47898826._013679.job.log.1
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc       357 Jan  8 05:51 output.list
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:51 runtime_log
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc   3041280 Jan  8 05:51 result.tar.gz
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc      8817 Jan  8 05:51 runtime_log.err
[2026-01-08 05:51:38] -rw-------. 1 boinc boinc       657 Jan  8 05:51 dgDMDm7npx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnsiKDm4hyuHm.diag
[2026-01-08 05:51:38] -rw-r--r--. 1 boinc boinc     20727 Jan  8 05:51 stderr.txt
[2026-01-08 05:51:39] HITS file was successfully produced:
[2026-01-08 05:51:39] -rw-------. 1 boinc boinc 218547262 Jan  8 05:47 shared/HITS.pool.root.1
[2026-01-08 05:51:39]  *** Contents of shared directory: ***
[2026-01-08 05:51:39] total 438864
[2026-01-08 05:51:39] -rw-r--r--. 2 boinc boinc 227189169 Jan  8 00:31 ATLAS.root_0
[2026-01-08 05:51:39] -rw-r--r--. 2 boinc boinc     15847 Jan  8 00:31 start_atlas.sh
[2026-01-08 05:51:39] -rw-r--r--. 2 boinc boinc    592392 Jan  8 00:31 input.tar.gz
[2026-01-08 05:51:39] -rw-------. 1 boinc boinc 218547262 Jan  8 05:47 HITS.pool.root.1
[2026-01-08 05:51:39] -rw-------. 1 boinc boinc   3041280 Jan  8 05:51 result.tar.gz
05:51:40 (29221): run_atlas exited; CPU time 81305.611293
05:51:40 (29221): called boinc_finish(0)

</stderr_txt>
]]>

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