Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:13 (1540365): wrapper (7.7.26015): starting
05:23:13 (1540365): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 05:23:13] Arguments: --nthreads 4
[2026-01-11 05:23:13] Threads: 4
[2026-01-11 05:23:13] Checking for CVMFS
[2026-01-11 05:23:13] No cvmfs_config command found, will try listing directly
[2026-01-11 05:23:13] CVMFS is ok
[2026-01-11 05:23:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:23:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:23:13] Further information can be found at the LHC@home message board.
[2026-01-11 05:23:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:23:13] Checking for apptainer binary...
[2026-01-11 05:23:13] which: no apptainer in ((null))
[2026-01-11 05:23:13] apptainer is not installed, using version from CVMFS
[2026-01-11 05:23:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:23:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-11 05:23:13] apptainer works
[2026-01-11 05:23:13] Set ATHENA_PROC_NUMBER=4
[2026-01-11 05:23:13] Set ATHENA_CORE_NUMBER=4
[2026-01-11 05:23:13] Starting ATLAS job with PandaID=6962320044
[2026-01-11 05:23:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 09:51:13]  *** The last 200 lines of the pilot log: ***
[2026-01-11 09:51:13] 2026-01-11 08:47:09,467 | INFO     | total number of processed events: 400 (read)
[2026-01-11 09:51:13] 2026-01-11 08:47:09,468 | INFO     | executing command: lscpu
[2026-01-11 09:51:13] 2026-01-11 08:47:09,528 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 09:51:13] 2026-01-11 08:47:10,659 | INFO     | monitor loop #1143: job 0:6962320044 is in state 'finished'
[2026-01-11 09:51:13] 2026-01-11 08:47:10,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:51:13] 2026-01-11 08:47:10,948 | INFO     | time since job start (15826s) is within the limit (174528.0s)
[2026-01-11 09:51:13] 2026-01-11 08:47:12,953 | INFO     | time since job start (15828s) is within the limit (174528.0s)
[2026-01-11 09:51:13] 2026-01-11 08:47:13,164 | INFO     | monitor loop #1144: job 0:6962320044 is in state 'finished'
[2026-01-11 09:51:13] 2026-01-11 08:47:13,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,070 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 09:51:13] 2026-01-11 08:47:14,080 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2565.0268437500004
[2026-01-11 09:51:13] 2026-01-11 08:47:14,092 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962320044/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,093 | INFO     | extracted standard info from prmon json
[2026-01-11 09:51:13] 2026-01-11 08:47:14,093 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 09:51:13] 2026-01-11 08:47:14,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 09:51:13] 2026-01-11 08:47:14,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 09:51:13] 2026-01-11 08:47:14,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 09:51:13] 2026-01-11 08:47:14,098 | INFO     | fitting pss+swap vs Time
[2026-01-11 09:51:13] 2026-01-11 08:47:14,099 | INFO     | sum of square deviations: 5387301010.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,101 | INFO     | sum of deviations: -47265255432.99999
[2026-01-11 09:51:13] 2026-01-11 08:47:14,101 | INFO     | mean x: 1768113301.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,101 | INFO     | mean y: 2367458.5984555986
[2026-01-11 09:51:13] 2026-01-11 08:47:14,101 | INFO     | intersect: 15514834026.017862
[2026-01-11 09:51:13] 2026-01-11 08:47:14,101 | INFO     | chi2: 1.532424359430722
[2026-01-11 09:51:13] 2026-01-11 08:47:14,102 | INFO     | sum of square deviations: 5081276667.5
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | sum of deviations: -46157067639.99997
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | mean x: 1768113148.5
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | mean y: 2368010.905511811
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | intersect: 16063473030.530544
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | chi2: 1.529048177212271
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | current chi2=1.529048177212271 (change=0.2203164024164464 %)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,104 | INFO     | right removable region: 253
[2026-01-11 09:51:13] 2026-01-11 08:47:14,105 | INFO     | sum of square deviations: 5081276667.5
[2026-01-11 09:51:13] 2026-01-11 08:47:14,106 | INFO     | sum of deviations: -73927947892.00002
[2026-01-11 09:51:13] 2026-01-11 08:47:14,107 | INFO     | mean x: 1768113453.5
[2026-01-11 09:51:13] 2026-01-11 08:47:14,107 | INFO     | mean y: 2380563.6692913384
[2026-01-11 09:51:13] 2026-01-11 08:47:14,107 | INFO     | intersect: 25726821055.86617
[2026-01-11 09:51:13] 2026-01-11 08:47:14,107 | INFO     | chi2: 0.3055398644112517
[2026-01-11 09:51:13] 2026-01-11 08:47:14,107 | INFO     | current chi2=0.3055398644112517 (change=80.06166747931648 %)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,108 | INFO     | sum of square deviations: 4787066500.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,109 | INFO     | sum of deviations: -62793339488.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,109 | INFO     | mean x: 1768113606.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,109 | INFO     | mean y: 2374781.690763052
[2026-01-11 09:51:13] 2026-01-11 08:47:14,110 | INFO     | intersect: 23195233689.10512
[2026-01-11 09:51:13] 2026-01-11 08:47:14,110 | INFO     | chi2: 0.2763030916782535
[2026-01-11 09:51:13] 2026-01-11 08:47:14,110 | INFO     | current chi2=0.2763030916782535 (change=9.56888973860575 %)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,110 | INFO     | left removable region: 20
[2026-01-11 09:51:13] 2026-01-11 08:47:14,110 | INFO     | sum of square deviations: 3922276332.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,112 | INFO     | sum of deviations: -35206049594.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,112 | INFO     | mean x: 1768113728.0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,112 | INFO     | mean y: 2360602.7253218885
[2026-01-11 09:51:13] 2026-01-11 08:47:14,112 | INFO     | intersect: 15872812943.868587
[2026-01-11 09:51:13] 2026-01-11 08:47:14,113 | INFO     | chi2: 0.14826101305016362
[2026-01-11 09:51:13] 2026-01-11 08:47:14,113 | INFO     | current memory leak: -8.98 B/s (using 233 data points, chi2=0.15)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,113 | INFO     | could have reported an average CPU frequency of 2549 MHz (12 samples)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | ..............................
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . Timing measurements:
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . get job = 0 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . initial setup = 1 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . payload setup = 6 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . stage-in = 0 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . payload execution = 15795 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . stage-out = 1 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | . log creation = 0 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,114 | INFO     | ..............................
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | 
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | job summary report
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | --------------------------------------------------
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | PanDA job id: 6962320044
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | task id: 47898826
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | errors: (none)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | pilot state: finished 
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | transexitcode: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,207 | INFO     | exeerrorcode: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | exeerrordiag: 
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | exitcode: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | exitmsg: OK
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | cpuconsumptiontime: 61486 s
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | nevents: 400
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | neventsw: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | pid: 1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | pgrp: 1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | corecount: 4
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | event service: False
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | sizes: {0: 2283809, 1: 2284008, 5: 2284270, 12: 2284326, 15805: 2315626, 15806: 2324830, 15813: 2324968}
[2026-01-11 09:51:13] 2026-01-11 08:47:14,208 | INFO     | --------------------------------------------------
[2026-01-11 09:51:13] 2026-01-11 08:47:14,209 | INFO     | 
[2026-01-11 09:51:13] 2026-01-11 08:47:14,209 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 09:51:13] 2026-01-11 08:47:14,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,232 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | job 6962320044 has completed (purged errors)
[2026-01-11 09:51:13] 2026-01-11 08:47:14,234 | INFO     | overall cleanup function is called
[2026-01-11 09:51:13] 2026-01-11 08:47:15,242 | INFO     | --- collectZombieJob: --- 10, [1551145]
[2026-01-11 09:51:13] 2026-01-11 08:47:15,243 | INFO     | zombie collector waiting for pid 1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:15,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 09:51:13] 2026-01-11 08:47:15,243 | INFO     | collected zombie processes
[2026-01-11 09:51:13] 2026-01-11 08:47:15,243 | INFO     | will attempt to kill all subprocesses of pid=1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:15,623 | INFO     | process IDs to be killed: [1551145] (in reverse order)
[2026-01-11 09:51:13] 2026-01-11 08:47:15,734 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 09:51:13] 2026-01-11 08:47:15,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 09:51:13] 2026-01-11 08:47:15,747 | INFO     | did not find any defunct processes belonging to 1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:15,759 | INFO     | did not find any defunct processes belonging to 1551145
[2026-01-11 09:51:13] 2026-01-11 08:47:15,760 | INFO     | ready for new job
[2026-01-11 09:51:13] 2026-01-11 08:47:15,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 09:51:13] 2026-01-11 08:47:15,762 | INFO     | ***************************************
[2026-01-11 09:51:13] 2026-01-11 08:47:15,762 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 09:51:13] 2026-01-11 08:47:15,762 | INFO     | ***************************************
[2026-01-11 09:51:13] 2026-01-11 08:47:15,762 | INFO     | 
[2026-01-11 09:51:13] 2026-01-11 08:47:15,766 | INFO     | architecture information:
[2026-01-11 09:51:13] 2026-01-11 08:47:15,767 | INFO     | executing command: cat /etc/os-release
[2026-01-11 09:51:13] 2026-01-11 08:47:15,784 | INFO     | cat /etc/os-release:
[2026-01-11 09:51:13] NAME="CentOS Linux"
[2026-01-11 09:51:13] VERSION="7 (Core)"
[2026-01-11 09:51:13] ID="centos"
[2026-01-11 09:51:13] ID_LIKE="rhel fedora"
[2026-01-11 09:51:13] VERSION_ID="7"
[2026-01-11 09:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 09:51:13] ANSI_COLOR="0;31"
[2026-01-11 09:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 09:51:13] HOME_URL="https://www.centos.org/"
[2026-01-11 09:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 09:51:13] 
[2026-01-11 09:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 09:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 09:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 09:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 09:51:13] 
[2026-01-11 09:51:13] 2026-01-11 08:47:15,784 | INFO     | ***************************************
[2026-01-11 09:51:13] 2026-01-11 08:47:16,287 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 09:51:13] 2026-01-11 08:47:16,304 | INFO     | sufficient remaining disk space (699423260672 B)
[2026-01-11 09:51:13] 2026-01-11 08:47:16,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 09:51:13] 2026-01-11 08:47:16,304 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 09:51:13] 2026-01-11 08:47:16,305 | INFO     | update_server=False
[2026-01-11 09:51:13] 2026-01-11 08:47:16,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 09:51:13] 2026-01-11 08:47:16,325 | INFO     | all data control threads have been joined
[2026-01-11 09:51:13] 2026-01-11 08:47:16,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:51:13] 2026-01-11 08:47:16,678 | INFO     | aborting loop
[2026-01-11 09:51:13] 2026-01-11 08:47:16,733 | INFO     | all job control threads have been joined
[2026-01-11 09:51:13] 2026-01-11 08:47:17,203 | INFO     | all payload control threads have been joined
[2026-01-11 09:51:13] 2026-01-11 08:47:17,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 09:51:13] 2026-01-11 08:47:17,309 | INFO     | [job] retrieve thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,330 | INFO     | [data] control thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,550 | INFO     | [job] validate thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 09:51:13] 2026-01-11 08:47:17,683 | INFO     | [job] job monitor thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,689 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,716 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,738 | INFO     | [job] control thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,773 | INFO     | [payload] failed_post thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:17,773 | INFO     | [payload] validate_post thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:18,200 | INFO     | [data] copytool_in thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:18,208 | INFO     | [payload] control thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:18,478 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:18,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:19,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:51:13] 2026-01-11 08:47:19,249 | INFO     | [data] copytool_out thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:20,222 | INFO     | [job] queue monitor thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:21,631 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 09:51:13] 2026-01-11 08:47:46,522 | INFO     | PID=1544143 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 09:51:13] 2026-01-11 08:47:46,522 | INFO     | .. there are 5 such processes running
[2026-01-11 09:51:13] 2026-01-11 08:47:46,523 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 09:51:13] 2026-01-11 08:47:46,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 09:51:13] 2026-01-11 08:47:46,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 09:51:13] 2026-01-11 08:47:50,241 | INFO     | [monitor] cgroup control has ended
[2026-01-11 09:51:13] 2026-01-11 08:47:50,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23142301083456)>', '<ExcThread(monitor, started 23142063900416)>']
[2026-01-11 09:51:13] 2026-01-11 08:47:51,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 09:51:13] 2026-01-11 08:47:51,546 | INFO     | [monitor] control thread has ended
[2026-01-11 09:51:13] 2026-01-11 08:47:55,989 | INFO     | all workflow threads have been joined
[2026-01-11 09:51:13] 2026-01-11 08:47:55,989 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 09:51:13] 2026-01-11 08:47:55,989 | INFO     | traces error code: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:55,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 09:51:13] 2026-01-11 08:47:56,133 [wrapper] ==== pilot stdout END ====
[2026-01-11 09:51:13] 2026-01-11 08:47:56,136 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 09:51:13] 2026-01-11 08:47:56,139 [wrapper] pilotpid: 1544143
[2026-01-11 09:51:13] 2026-01-11 08:47:56,142 [wrapper] Pilot exit status: 0
[2026-01-11 09:51:13] 2026-01-11 08:47:56,152 [wrapper] pandaids: 6962320044
[2026-01-11 09:51:13] 2026-01-11 08:47:56,225 [wrapper] cleanup supervisor_pilot 1848328 1544144
[2026-01-11 09:51:13] 2026-01-11 08:47:56,228 [wrapper] Test setup, not cleaning
[2026-01-11 09:51:13] 2026-01-11 08:47:56,231 [wrapper] apfmon messages muted
[2026-01-11 09:51:13] 2026-01-11 08:47:56,233 [wrapper] ==== wrapper stdout END ====
[2026-01-11 09:51:13] 2026-01-11 08:47:56,236 [wrapper] ==== wrapper stderr END ====
[2026-01-11 09:51:13]  *** Error codes and diagnostics ***
[2026-01-11 09:51:13]     "exeErrorCode": 0,
[2026-01-11 09:51:13]     "exeErrorDiag": "",
[2026-01-11 09:51:13]     "pilotErrorCode": 0,
[2026-01-11 09:51:13]     "pilotErrorDiag": "",
[2026-01-11 09:51:13]  *** Listing of results directory ***
[2026-01-11 09:51:13] total 445632
[2026-01-11 09:51:13] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:04 queuedata.json
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc       100 Jan 11 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 09:51:13] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 05:23 run_atlas
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc       105 Jan 11 05:23 job.xml
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc      6636 Jan 11 05:23 init_data.xml
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc 226713623 Jan 11 05:23 EVNT.47898824._000602.pool.root.1
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:23 start_atlas.sh
[2026-01-11 09:51:13] drwxrwx--x 2 boinc boinc      4096 Jan 11 05:23 shared
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc    592388 Jan 11 05:23 input.tar.gz
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc         0 Jan 11 05:23 boinc_lockfile
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc      2519 Jan 11 05:23 pandaJob.out
[2026-01-11 09:51:13] -rw------- 1 boinc boinc    989548 Jan 11 05:23 agis_schedconf.cvmfs.json
[2026-01-11 09:51:13] drwx------ 5 boinc boinc      4096 Jan 11 05:23 pilot3
[2026-01-11 09:51:13] -rw------- 1 boinc boinc 220408827 Jan 11 09:46 HITS.47898826._013895.pool.root.1
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc       529 Jan 11 09:46 boinc_task_state.xml
[2026-01-11 09:51:13] -rw------- 1 boinc boinc      1036 Jan 11 09:47 memory_monitor_summary.json
[2026-01-11 09:51:13] -rw------- 1 boinc boinc   1516240 Jan 11 09:47 agis_ddmendpoints.agis.ALL.json
[2026-01-11 09:51:13] -rw------- 1 boinc boinc    418293 Jan 11 09:47 log.47898826._013895.job.log.tgz.1
[2026-01-11 09:51:13] -rw------- 1 boinc boinc        95 Jan 11 09:47 pilot_heartbeat.json
[2026-01-11 09:51:13] -rw------- 1 boinc boinc      7831 Jan 11 09:47 heartbeat.json
[2026-01-11 09:51:13] -rw------- 1 boinc boinc      4833 Jan 11 09:47 pilotlog.txt
[2026-01-11 09:51:13] -rw------- 1 boinc boinc   2226061 Jan 11 09:47 log.47898826._013895.job.log.1
[2026-01-11 09:51:13] -rw------- 1 boinc boinc       357 Jan 11 09:47 output.list
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc       620 Jan 11 09:47 runtime_log
[2026-01-11 09:51:13] -rw------- 1 boinc boinc   2662400 Jan 11 09:47 result.tar.gz
[2026-01-11 09:51:13] -rw------- 1 boinc boinc       665 Jan 11 09:47 xJUNDmJopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmltiKDmQ6tvNm.diag
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc      9206 Jan 11 09:47 runtime_log.err
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc        26 Jan 11 09:50 wrapper_checkpoint.txt
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc      8192 Jan 11 09:51 boinc_mmap_file
[2026-01-11 09:51:13] -rw-r--r-- 1 boinc boinc     21147 Jan 11 09:51 stderr.txt
[2026-01-11 09:51:13] HITS file was successfully produced:
[2026-01-11 09:51:13] -rw------- 1 boinc boinc 220408827 Jan 11 09:46 shared/HITS.pool.root.1
[2026-01-11 09:51:13]  *** Contents of shared directory: ***
[2026-01-11 09:51:13] total 439852
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc 226713623 Jan 11 05:23 ATLAS.root_0
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:23 start_atlas.sh
[2026-01-11 09:51:13] -rw-r--r-- 2 boinc boinc    592388 Jan 11 05:23 input.tar.gz
[2026-01-11 09:51:13] -rw------- 1 boinc boinc 220408827 Jan 11 09:46 HITS.pool.root.1
[2026-01-11 09:51:13] -rw------- 1 boinc boinc   2662400 Jan 11 09:47 result.tar.gz
09:51:15 (1540365): run_atlas exited; CPU time 62155.280316
09:51:15 (1540365): called boinc_finish(0)

</stderr_txt>
]]>

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