Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:34:39 (14023): wrapper (7.7.26015): starting
19:34:39 (14023): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 19:34:39] Arguments: --nthreads 8
[2026-01-07 19:34:39] Threads: 8
[2026-01-07 19:34:39] Checking for CVMFS
[2026-01-07 19:34:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 19:34:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 19:34:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 19:34:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 19:34:41] 2.13.3.0 8593 17598 227740 154885 2 92 26048211 39288832 11991 16776704 0 14934392 99.665 27476950 32654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 19:34:41] CVMFS is ok
[2026-01-07 19:34:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 19:34:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 19:34:41] Further information can be found at the LHC@home message board.
[2026-01-07 19:34:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 19:34:41] Checking for apptainer binary...
[2026-01-07 19:34:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 19:34:41] Running /usr/bin/apptainer --version
[2026-01-07 19:34:41] apptainer version 1.4.5-2.el9
[2026-01-07 19:34:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 19:35:02] c-211-25.aglt2.org
[2026-01-07 19:35:02] apptainer works
[2026-01-07 19:35:02] Set ATHENA_PROC_NUMBER=8
[2026-01-07 19:35:02] Set ATHENA_CORE_NUMBER=8
[2026-01-07 19:35:02] Starting ATLAS job with PandaID=6962319853
[2026-01-07 19:35:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 00:49:50]  *** The last 200 lines of the pilot log: ***
[2026-01-08 00:49:50] 2026-01-08 05:49:08,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:49:50] 2026-01-08 05:49:08,336 | INFO     | time since job start (18782s) is within the limit (174528.0s)
[2026-01-08 00:49:50] 2026-01-08 05:49:10,342 | INFO     | time since job start (18784s) is within the limit (174528.0s)
[2026-01-08 00:49:50] 2026-01-08 05:49:10,755 | INFO     | monitor loop #1236: job 0:6962319853 is in state 'finished'
[2026-01-08 00:49:50] 2026-01-08 05:49:10,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:49:50] 2026-01-08 05:49:12,349 | INFO     | time since job start (18786s) is within the limit (174528.0s)
[2026-01-08 00:49:50] 2026-01-08 05:49:13,259 | INFO     | monitor loop #1237: job 0:6962319853 is in state 'finished'
[2026-01-08 00:49:50] 2026-01-08 05:49:13,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:49:50] 2026-01-08 05:49:14,357 | INFO     | time since job start (18788s) is within the limit (174528.0s)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,219 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 00:49:50] 2026-01-08 05:49:15,230 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.002899999999
[2026-01-08 00:49:50] 2026-01-08 05:49:15,238 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962319853/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,239 | INFO     | extracted standard info from prmon json
[2026-01-08 00:49:50] 2026-01-08 05:49:15,239 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 00:49:50] 2026-01-08 05:49:15,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 00:49:50] 2026-01-08 05:49:15,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 00:49:50] 2026-01-08 05:49:15,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 00:49:50] 2026-01-08 05:49:15,247 | INFO     | fitting pss+swap vs Time
[2026-01-08 00:49:50] 2026-01-08 05:49:15,248 | INFO     | sum of square deviations: 8886060512.251621
[2026-01-08 00:49:50] 2026-01-08 05:49:15,251 | INFO     | sum of deviations: -38696884437.47058
[2026-01-08 00:49:50] 2026-01-08 05:49:15,251 | INFO     | mean x: 1767841991.9052289
[2026-01-08 00:49:50] 2026-01-08 05:49:15,251 | INFO     | mean y: 2536101.294117647
[2026-01-08 00:49:50] 2026-01-08 05:49:15,251 | INFO     | intersect: 7701108170.451699
[2026-01-08 00:49:50] 2026-01-08 05:49:15,252 | INFO     | chi2: 2.9357617013271042
[2026-01-08 00:49:50] 2026-01-08 05:49:15,253 | INFO     | sum of square deviations: 8457690781.25584
[2026-01-08 00:49:50] 2026-01-08 05:49:15,255 | INFO     | sum of deviations: -18659414272.7209
[2026-01-08 00:49:50] 2026-01-08 05:49:15,256 | INFO     | mean x: 1767841839.4186046
[2026-01-08 00:49:50] 2026-01-08 05:49:15,256 | INFO     | mean y: 2543143.6644518273
[2026-01-08 00:49:50] 2026-01-08 05:49:15,256 | INFO     | intersect: 3902767697.0930443
[2026-01-08 00:49:50] 2026-01-08 05:49:15,257 | INFO     | chi2: 2.2622232741978934
[2026-01-08 00:49:50] 2026-01-08 05:49:15,257 | INFO     | current chi2=2.2622232741978934 (change=22.942544240724285 %)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,257 | INFO     | right removable region: 300
[2026-01-08 00:49:50] 2026-01-08 05:49:15,258 | INFO     | sum of square deviations: 8457484109.71428
[2026-01-08 00:49:50] 2026-01-08 05:49:15,260 | INFO     | sum of deviations: -96037639581.99994
[2026-01-08 00:49:50] 2026-01-08 05:49:15,261 | INFO     | mean x: 1767842144.4285715
[2026-01-08 00:49:50] 2026-01-08 05:49:15,261 | INFO     | mean y: 2556381.4418604653
[2026-01-08 00:49:50] 2026-01-08 05:49:15,261 | INFO     | intersect: 20077011680.682938
[2026-01-08 00:49:50] 2026-01-08 05:49:15,262 | INFO     | chi2: 1.1156739436064373
[2026-01-08 00:49:50] 2026-01-08 05:49:15,262 | INFO     | current chi2=1.1156739436064373 (change=61.99712179969854 %)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,262 | INFO     | sum of square deviations: 8042907969.3378105
[2026-01-08 00:49:50] 2026-01-08 05:49:15,265 | INFO     | sum of deviations: -96998303191.40535
[2026-01-08 00:49:50] 2026-01-08 05:49:15,265 | INFO     | mean x: 1767842296.9527028
[2026-01-08 00:49:50] 2026-01-08 05:49:15,266 | INFO     | mean y: 2556728.256756757
[2026-01-08 00:49:50] 2026-01-08 05:49:15,266 | INFO     | intersect: 21322917941.904564
[2026-01-08 00:49:50] 2026-01-08 05:49:15,266 | INFO     | chi2: 1.1027911933010077
[2026-01-08 00:49:50] 2026-01-08 05:49:15,266 | INFO     | current chi2=1.1027911933010077 (change=1.1547056717830917 %)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,267 | INFO     | left removable region: 20
[2026-01-08 00:49:50] 2026-01-08 05:49:15,267 | INFO     | sum of square deviations: 6807988691.985711
[2026-01-08 00:49:50] 2026-01-08 05:49:15,270 | INFO     | sum of deviations: -49581904478.31431
[2026-01-08 00:49:50] 2026-01-08 05:49:15,270 | INFO     | mean x: 1767842418.9928572
[2026-01-08 00:49:50] 2026-01-08 05:49:15,270 | INFO     | mean y: 2553634.842857143
[2026-01-08 00:49:50] 2026-01-08 05:49:15,270 | INFO     | intersect: 12877574131.63071
[2026-01-08 00:49:50] 2026-01-08 05:49:15,271 | INFO     | chi2: 0.33685848867855556
[2026-01-08 00:49:50] 2026-01-08 05:49:15,271 | INFO     | current memory leak: -7.28 B/s (using 280 data points, chi2=0.34)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,272 | INFO     | could have reported an average CPU frequency of 2900 MHz (14 samples)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,272 | INFO     | ..............................
[2026-01-08 00:49:50] 2026-01-08 05:49:15,272 | INFO     | . Timing measurements:
[2026-01-08 00:49:50] 2026-01-08 05:49:15,272 | INFO     | . get job = 0 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,272 | INFO     | . initial setup = 4 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | . payload setup = 32 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | . stage-in = 0 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | . payload execution = 18645 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | . stage-out = 4 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | . log creation = 0 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,273 | INFO     | ..............................
[2026-01-08 00:49:50] 2026-01-08 05:49:15,529 | INFO     | 
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | job summary report
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | --------------------------------------------------
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | PanDA job id: 6962319853
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | task id: 47898826
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | errors: (none)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | pilot state: finished 
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | transexitcode: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | exeerrorcode: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | exeerrordiag: 
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | exitcode: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | exitmsg: OK
[2026-01-08 00:49:50] 2026-01-08 05:49:15,531 | INFO     | cpuconsumptiontime: 111556 s
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | nevents: 400
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | neventsw: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | pid: 29061
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | pgrp: 29061
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | corecount: 8
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | event service: False
[2026-01-08 00:49:50] 2026-01-08 05:49:15,532 | INFO     | sizes: {0: 2283969, 1: 2283997, 12: 2283997, 23: 2284025, 27: 2284315, 34: 2284343, 18682: 2317604, 18683: 2317603, 18688: 2326685, 18690: 2326741, 18726: 2326935}
[2026-01-08 00:49:50] 2026-01-08 05:49:15,533 | INFO     | --------------------------------------------------
[2026-01-08 00:49:50] 2026-01-08 05:49:15,533 | INFO     | 
[2026-01-08 00:49:50] 2026-01-08 05:49:15,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 00:49:50] 2026-01-08 05:49:15,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 00:49:50] 2026-01-08 05:49:15,586 | INFO     | job 6962319853 has completed (purged errors)
[2026-01-08 00:49:50] 2026-01-08 05:49:15,586 | INFO     | overall cleanup function is called
[2026-01-08 00:49:50] 2026-01-08 05:49:16,598 | INFO     | --- collectZombieJob: --- 10, [29061]
[2026-01-08 00:49:50] 2026-01-08 05:49:16,598 | INFO     | zombie collector waiting for pid 29061
[2026-01-08 00:49:50] 2026-01-08 05:49:16,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 00:49:50] 2026-01-08 05:49:16,599 | INFO     | collected zombie processes
[2026-01-08 00:49:50] 2026-01-08 05:49:16,599 | INFO     | will attempt to kill all subprocesses of pid=29061
[2026-01-08 00:49:50] 2026-01-08 05:49:17,565 | INFO     | process IDs to be killed: [29061] (in reverse order)
[2026-01-08 00:49:50] 2026-01-08 05:49:17,751 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 00:49:50] 2026-01-08 05:49:17,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 00:49:50] 2026-01-08 05:49:17,769 | INFO     | did not find any defunct processes belonging to 29061
[2026-01-08 00:49:50] 2026-01-08 05:49:17,785 | INFO     | did not find any defunct processes belonging to 29061
[2026-01-08 00:49:50] 2026-01-08 05:49:17,786 | INFO     | ready for new job
[2026-01-08 00:49:50] 2026-01-08 05:49:17,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 00:49:50] 2026-01-08 05:49:17,788 | INFO     | ***************************************
[2026-01-08 00:49:50] 2026-01-08 05:49:17,789 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 00:49:50] 2026-01-08 05:49:17,789 | INFO     | ***************************************
[2026-01-08 00:49:50] 2026-01-08 05:49:17,789 | INFO     | 
[2026-01-08 00:49:50] 2026-01-08 05:49:17,791 | INFO     | architecture information:
[2026-01-08 00:49:50] 2026-01-08 05:49:17,792 | INFO     | executing command: cat /etc/os-release
[2026-01-08 00:49:50] 2026-01-08 05:49:17,841 | INFO     | cat /etc/os-release:
[2026-01-08 00:49:50] NAME="CentOS Linux"
[2026-01-08 00:49:50] VERSION="7 (Core)"
[2026-01-08 00:49:50] ID="centos"
[2026-01-08 00:49:50] ID_LIKE="rhel fedora"
[2026-01-08 00:49:50] VERSION_ID="7"
[2026-01-08 00:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 00:49:50] ANSI_COLOR="0;31"
[2026-01-08 00:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 00:49:50] HOME_URL="https://www.centos.org/"
[2026-01-08 00:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 00:49:50] 
[2026-01-08 00:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 00:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 00:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 00:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 00:49:50] 
[2026-01-08 00:49:50] 2026-01-08 05:49:17,843 | INFO     | ***************************************
[2026-01-08 00:49:50] 2026-01-08 05:49:18,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 00:49:50] 2026-01-08 05:49:18,462 | INFO     | sufficient remaining disk space (52664729600 B)
[2026-01-08 00:49:50] 2026-01-08 05:49:18,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 00:49:50] 2026-01-08 05:49:18,463 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 00:49:50] 2026-01-08 05:49:18,463 | INFO     | update_server=False
[2026-01-08 00:49:50] 2026-01-08 05:49:18,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 00:49:50] 2026-01-08 05:49:18,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 00:49:50] 2026-01-08 05:49:18,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 00:49:50] 2026-01-08 05:49:18,688 | INFO     | all data control threads have been joined
[2026-01-08 00:49:50] 2026-01-08 05:49:19,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:49:50] 2026-01-08 05:49:19,286 | INFO     | aborting loop
[2026-01-08 00:49:50] 2026-01-08 05:49:19,469 | INFO     | [job] retrieve thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:19,694 | INFO     | [data] control thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:19,827 | INFO     | all job control threads have been joined
[2026-01-08 00:49:50] 2026-01-08 05:49:19,930 | INFO     | all payload control threads have been joined
[2026-01-08 00:49:50] 2026-01-08 05:49:20,004 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,034 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,051 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,273 | INFO     | [payload] failed_post thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,283 | INFO     | [payload] validate_post thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,293 | INFO     | [job] job monitor thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:49:50] 2026-01-08 05:49:20,573 | INFO     | [job] validate thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,585 | INFO     | [data] copytool_in thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,659 | INFO     | [data] copytool_out thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,834 | INFO     | [job] control thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:20,939 | INFO     | [payload] control thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:21,550 | INFO     | [job] queue monitor thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:22,473 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 00:49:50] 2026-01-08 05:49:38,066 | INFO     | [monitor] cgroup control has ended
[2026-01-08 00:49:50] 2026-01-08 05:49:39,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664838252352)>', '<ExcThread(monitor, started 139664484726528)>']
[2026-01-08 00:49:50] 2026-01-08 05:49:44,684 | INFO     | all workflow threads have been joined
[2026-01-08 00:49:50] 2026-01-08 05:49:44,684 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 00:49:50] 2026-01-08 05:49:44,685 | INFO     | traces error code: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:44,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 00:49:50] 2026-01-08 05:49:48,259 | INFO     | PID=18969 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 00:49:50] 2026-01-08 05:49:48,260 | INFO     | .. there are 11 such processes running
[2026-01-08 00:49:50] 2026-01-08 05:49:48,265 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 00:49:50] 2026-01-08 05:49:48,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 00:49:50] 2026-01-08 05:49:48,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 00:49:50] 2026-01-08 05:49:48,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 00:49:50] 2026-01-08 05:49:48,266 | INFO     | [monitor] control thread has ended
[2026-01-08 00:49:50] 2026-01-08 05:49:48,745 [wrapper] ==== pilot stdout END ====
[2026-01-08 00:49:50] 2026-01-08 05:49:48,808 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 00:49:50] 2026-01-08 05:49:48,872 [wrapper] pilotpid: 18969
[2026-01-08 00:49:50] 2026-01-08 05:49:48,933 [wrapper] Pilot exit status: 0
[2026-01-08 00:49:50] 2026-01-08 05:49:49,121 [wrapper] pandaids: 6962319853
[2026-01-08 00:49:50] 2026-01-08 05:49:49,399 [wrapper] cleanup supervisor_pilot 1310192 18970
[2026-01-08 00:49:50] 2026-01-08 05:49:49,451 [wrapper] Test setup, not cleaning
[2026-01-08 00:49:50] 2026-01-08 05:49:49,491 [wrapper] apfmon messages muted
[2026-01-08 00:49:50] 2026-01-08 05:49:49,528 [wrapper] ==== wrapper stdout END ====
[2026-01-08 00:49:50] 2026-01-08 05:49:49,559 [wrapper] ==== wrapper stderr END ====
[2026-01-08 00:49:50]  *** Error codes and diagnostics ***
[2026-01-08 00:49:50]     "exeErrorCode": 0,
[2026-01-08 00:49:50]     "exeErrorDiag": "",
[2026-01-08 00:49:50]     "pilotErrorCode": 0,
[2026-01-08 00:49:50]     "pilotErrorDiag": "",
[2026-01-08 00:49:50]  *** Listing of results directory ***
[2026-01-08 00:49:50] total 441764
[2026-01-08 00:49:50] -rwx------. 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:04 queuedata.json
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas       100 Jan  7 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 00:49:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 19:34 run_atlas
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas       105 Jan  7 19:34 job.xml
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas 222648026 Jan  7 19:34 EVNT.47898824._000594.pool.root.1
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 19:34 start_atlas.sh
[2026-01-08 00:49:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 19:34 shared
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas    592397 Jan  7 19:34 input.tar.gz
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas         0 Jan  7 19:34 boinc_lockfile
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 19:35 pandaJob.out
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas        57 Jan  7 19:35 setup.sh.local
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas    989777 Jan  7 19:36 agis_schedconf.cvmfs.json
[2026-01-08 00:49:50] drwx------. 5 boincer umatlas      4096 Jan  7 19:36 pilot3
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas      6523 Jan  8 00:45 init_data.xml
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas 219785504 Jan  8 00:47 HITS.47898826._013704.pool.root.1
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas       532 Jan  8 00:47 boinc_task_state.xml
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas      1044 Jan  8 00:48 memory_monitor_summary.json
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas   1516240 Jan  8 00:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas    524438 Jan  8 00:48 log.47898826._013704.job.log.tgz.1
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas      7825 Jan  8 00:49 heartbeat.json
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 00:49 boinc_mmap_file
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas        29 Jan  8 00:49 wrapper_checkpoint.txt
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas        95 Jan  8 00:49 pilot_heartbeat.json
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas       821 Jan  8 00:49 pilotlog.txt
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas   2484310 Jan  8 00:49 log.47898826._013704.job.log.1
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas       357 Jan  8 00:49 output.list
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas       620 Jan  8 00:49 runtime_log
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas   3031040 Jan  8 00:49 result.tar.gz
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 00:49 runtime_log.err
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas       660 Jan  8 00:49 ewbMDm7npx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6siKDmi8lC6m.diag
[2026-01-08 00:49:50] -rw-r--r--. 1 boincer umatlas     21434 Jan  8 00:49 stderr.txt
[2026-01-08 00:49:50] HITS file was successfully produced:
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas 219785504 Jan  8 00:47 shared/HITS.pool.root.1
[2026-01-08 00:49:50]  *** Contents of shared directory: ***
[2026-01-08 00:49:50] total 435628
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas 222648026 Jan  7 19:34 ATLAS.root_0
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 19:34 start_atlas.sh
[2026-01-08 00:49:50] -rw-r--r--. 2 boincer umatlas    592397 Jan  7 19:34 input.tar.gz
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas 219785504 Jan  8 00:47 HITS.pool.root.1
[2026-01-08 00:49:50] -rw-------. 1 boincer umatlas   3031040 Jan  8 00:49 result.tar.gz
00:49:52 (14023): run_atlas exited; CPU time 112120.783951
00:49:52 (14023): called boinc_finish(0)

</stderr_txt>
]]>

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