Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:55 (1252351): wrapper (7.7.26015): starting
01:19:55 (1252351): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 01:19:55] Arguments: --nthreads 4
[2026-01-08 01:19:55] Threads: 4
[2026-01-08 01:19:55] Checking for CVMFS
[2026-01-08 01:19:55] No cvmfs_config command found, will try listing directly
[2026-01-08 01:19:55] CVMFS is ok
[2026-01-08 01:19:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 01:19:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 01:19:55] Further information can be found at the LHC@home message board.
[2026-01-08 01:19:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 01:19:55] Checking for apptainer binary...
[2026-01-08 01:19:55] which: no apptainer in ((null))
[2026-01-08 01:19:55] apptainer is not installed, using version from CVMFS
[2026-01-08 01:19:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 01:19:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-01-08 01:19:55] apptainer works
[2026-01-08 01:19:55] Set ATHENA_PROC_NUMBER=4
[2026-01-08 01:19:55] Set ATHENA_CORE_NUMBER=4
[2026-01-08 01:19:55] Starting ATLAS job with PandaID=6962319594
[2026-01-08 01:19:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:06:09]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:06:09] 2026-01-08 03:48:44,685 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2607.2664062500007
[2026-01-08 05:06:09] 2026-01-08 03:48:44,708 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6962319594/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,709 | INFO     | extracted standard info from prmon json
[2026-01-08 05:06:09] 2026-01-08 03:48:44,709 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:06:09] 2026-01-08 03:48:44,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:06:09] 2026-01-08 03:48:44,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:06:09] 2026-01-08 03:48:44,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:06:09] 2026-01-08 03:48:44,714 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:06:09] 2026-01-08 03:48:44,715 | INFO     | sum of square deviations: 2671343110.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,716 | INFO     | sum of deviations: -83508766492.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,716 | INFO     | mean x: 1767837865.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,716 | INFO     | mean y: 2425365.463414634
[2026-01-08 05:06:09] 2026-01-08 03:48:44,717 | INFO     | intersect: 55266744992.304924
[2026-01-08 05:06:09] 2026-01-08 03:48:44,717 | INFO     | chi2: 2.320089469041498
[2026-01-08 05:06:09] 2026-01-08 03:48:44,717 | INFO     | sum of square deviations: 2480604650.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | sum of deviations: -68699241208.999985
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | mean x: 1767837712.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | mean y: 2437018.94
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | intersect: 48961915277.35747
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | chi2: 1.6461136613980984
[2026-01-08 05:06:09] 2026-01-08 03:48:44,719 | INFO     | current chi2=1.6461136613980984 (change=29.049561089635052 %)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,720 | INFO     | sum of square deviations: 2299168690.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,721 | INFO     | sum of deviations: -65968967096.99999
[2026-01-08 05:06:09] 2026-01-08 03:48:44,721 | INFO     | mean x: 1767837560.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,721 | INFO     | mean y: 2439314.2564102565
[2026-01-08 05:06:09] 2026-01-08 03:48:44,721 | INFO     | intersect: 50726171911.92011
[2026-01-08 05:06:09] 2026-01-08 03:48:44,722 | INFO     | chi2: 1.6365443551594927
[2026-01-08 05:06:09] 2026-01-08 03:48:44,722 | INFO     | current chi2=1.6365443551594927 (change=0.5813271867556351 %)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,722 | INFO     | right removable region: 194
[2026-01-08 05:06:09] 2026-01-08 03:48:44,722 | INFO     | sum of square deviations: 2480604650.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | sum of deviations: -103887926756.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | mean x: 1767838017.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | mean y: 2441360.375
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | intersect: 74039642927.09631
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | chi2: 1.0941176798302632
[2026-01-08 05:06:09] 2026-01-08 03:48:44,724 | INFO     | current chi2=1.0941176798302632 (change=52.84157380869119 %)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,725 | INFO     | sum of square deviations: 2299168690.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,726 | INFO     | sum of deviations: -98277374866.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,726 | INFO     | mean x: 1767838170.0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,726 | INFO     | mean y: 2436622.292307692
[2026-01-08 05:06:09] 2026-01-08 03:48:44,726 | INFO     | intersect: 75568224940.11838
[2026-01-08 05:06:09] 2026-01-08 03:48:44,727 | INFO     | chi2: 1.0901218304581333
[2026-01-08 05:06:09] 2026-01-08 03:48:44,727 | INFO     | current chi2=1.0901218304581333 (change=0.3652120284492463 %)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,727 | INFO     | left removable region: 20
[2026-01-08 05:06:09] 2026-01-08 03:48:44,727 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,728 | INFO     | sum of deviations: -64585014804.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,729 | INFO     | mean x: 1767838139.5
[2026-01-08 05:06:09] 2026-01-08 03:48:44,729 | INFO     | mean y: 2436383.385057471
[2026-01-08 05:06:09] 2026-01-08 03:48:44,729 | INFO     | intersect: 69900064464.22975
[2026-01-08 05:06:09] 2026-01-08 03:48:44,729 | INFO     | chi2: 0.3709509569387912
[2026-01-08 05:06:09] 2026-01-08 03:48:44,729 | INFO     | current memory leak: -39.54 B/s (using 174 data points, chi2=0.37)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | could have reported an average CPU frequency of 2630 MHz (10 samples)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | ..............................
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . Timing measurements:
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . get job = 0 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . initial setup = 1 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . payload setup = 8 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . stage-in = 0 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . payload execution = 12475 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,730 | INFO     | . stage-out = 1 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,731 | INFO     | . log creation = 0 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,731 | INFO     | ..............................
[2026-01-08 05:06:09] 2026-01-08 03:48:44,831 | INFO     | 
[2026-01-08 05:06:09] 2026-01-08 03:48:44,831 | INFO     | job summary report
[2026-01-08 05:06:09] 2026-01-08 03:48:44,831 | INFO     | --------------------------------------------------
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | PanDA job id: 6962319594
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | task id: 47898826
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | errors: (none)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | pilot state: finished 
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | transexitcode: 0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | exeerrorcode: 0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | exeerrordiag: 
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | exitcode: 0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | exitmsg: OK
[2026-01-08 05:06:09] 2026-01-08 03:48:44,832 | INFO     | cpuconsumptiontime: 47569 s
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | nevents: 400
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | neventsw: 0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | pid: 1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | pgrp: 1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | corecount: 4
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | event service: False
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | sizes: {0: 2283981, 6: 2284243, 11: 2284271, 12488: 2314602, 12489: 2314601, 12490: 2323679, 12492: 2323863, 12498: 2324057}
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | --------------------------------------------------
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | 
[2026-01-08 05:06:09] 2026-01-08 03:48:44,833 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:06:09] 2026-01-08 03:48:44,866 | INFO     | job 6962319594 has completed (purged errors)
[2026-01-08 05:06:09] 2026-01-08 03:48:44,866 | INFO     | overall cleanup function is called
[2026-01-08 05:06:09] 2026-01-08 03:48:45,873 | INFO     | --- collectZombieJob: --- 10, [1264645]
[2026-01-08 05:06:09] 2026-01-08 03:48:45,873 | INFO     | zombie collector waiting for pid 1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:45,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:06:09] 2026-01-08 03:48:45,874 | INFO     | collected zombie processes
[2026-01-08 05:06:09] 2026-01-08 03:48:45,874 | INFO     | will attempt to kill all subprocesses of pid=1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:46,680 | INFO     | process IDs to be killed: [1264645] (in reverse order)
[2026-01-08 05:06:09] 2026-01-08 03:48:46,919 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:06:09] 2026-01-08 03:48:46,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:06:09] 2026-01-08 03:48:46,951 | INFO     | did not find any defunct processes belonging to 1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:46,980 | INFO     | did not find any defunct processes belonging to 1264645
[2026-01-08 05:06:09] 2026-01-08 03:48:46,981 | INFO     | ready for new job
[2026-01-08 05:06:09] 2026-01-08 03:48:46,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:06:09] 2026-01-08 03:48:46,984 | INFO     | ***************************************
[2026-01-08 05:06:09] 2026-01-08 03:48:46,984 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:06:09] 2026-01-08 03:48:46,984 | INFO     | ***************************************
[2026-01-08 05:06:09] 2026-01-08 03:48:46,984 | INFO     | 
[2026-01-08 05:06:09] 2026-01-08 03:48:46,993 | INFO     | architecture information:
[2026-01-08 05:06:09] 2026-01-08 03:48:46,993 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:06:09] 2026-01-08 03:48:47,017 | INFO     | cat /etc/os-release:
[2026-01-08 05:06:09] NAME="CentOS Linux"
[2026-01-08 05:06:09] VERSION="7 (Core)"
[2026-01-08 05:06:09] ID="centos"
[2026-01-08 05:06:09] ID_LIKE="rhel fedora"
[2026-01-08 05:06:09] VERSION_ID="7"
[2026-01-08 05:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:06:09] ANSI_COLOR="0;31"
[2026-01-08 05:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:06:09] HOME_URL="https://www.centos.org/"
[2026-01-08 05:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:06:09] 
[2026-01-08 05:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:06:09] 
[2026-01-08 05:06:09] 2026-01-08 03:48:47,018 | INFO     | ***************************************
[2026-01-08 05:06:09] 2026-01-08 03:48:47,521 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-08 05:06:09] 2026-01-08 03:48:47,549 | INFO     | sufficient remaining disk space (3325186539520 B)
[2026-01-08 05:06:09] 2026-01-08 03:48:47,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:06:09] 2026-01-08 03:48:47,549 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:06:09] 2026-01-08 03:48:47,550 | INFO     | update_server=False
[2026-01-08 05:06:09] 2026-01-08 03:48:47,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:06:09] 2026-01-08 03:48:47,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:06:09] 2026-01-08 03:48:47,765 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 05:06:09] 2026-01-08 03:48:47,765 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 05:06:09] 2026-01-08 03:48:47,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:06:09] 2026-01-08 03:48:47,766 | INFO     | will abort loop
[2026-01-08 05:06:09] 2026-01-08 03:48:48,213 | INFO     | all data control threads have been joined
[2026-01-08 05:06:09] 2026-01-08 03:48:48,413 | INFO     | all payload control threads have been joined
[2026-01-08 05:06:09] 2026-01-08 03:48:48,555 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:48,710 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:48,746 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:48,771 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:48,862 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:48,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:06:09] 2026-01-08 03:48:49,173 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,219 | INFO     | [data] control thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,236 | INFO     | all job control threads have been joined
[2026-01-08 05:06:09] 2026-01-08 03:48:49,362 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,418 | INFO     | [payload] control thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,482 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,555 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:49,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:06:09] 2026-01-08 03:48:49,981 | INFO     | [job] validate thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:50,242 | INFO     | [job] control thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:50,847 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:52,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:48:58,009 | INFO     | job.realtimelogging is not enabled
[2026-01-08 05:06:09] 2026-01-08 03:48:59,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:06:09] 2026-01-08 03:49:18,196 | INFO     | PID=1257233 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-08 05:06:09] 2026-01-08 03:49:18,196 | INFO     | .. there are 5 such processes running
[2026-01-08 05:06:09] 2026-01-08 03:49:18,196 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:06:09] 2026-01-08 03:49:18,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:06:09] 2026-01-08 03:49:18,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:06:09] 2026-01-08 03:49:27,759 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:06:09] 2026-01-08 03:49:29,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22611214985024)>', '<ExcThread(monitor, started 22610976933632)>']
[2026-01-08 05:06:09] 2026-01-08 03:49:30,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:06:09] 2026-01-08 03:49:30,257 | INFO     | [monitor] control thread has ended
[2026-01-08 05:06:09] 2026-01-08 03:49:34,669 | INFO     | all workflow threads have been joined
[2026-01-08 05:06:09] 2026-01-08 03:49:34,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:06:09] 2026-01-08 03:49:34,669 | INFO     | traces error code: 0
[2026-01-08 05:06:09] 2026-01-08 03:49:34,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:06:09] 2026-01-08 03:49:34,832 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:06:09] 2026-01-08 03:49:34,836 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:06:09] 2026-01-08 03:49:34,840 [wrapper] pilotpid: 1257233
[2026-01-08 05:06:09] 2026-01-08 03:49:34,843 [wrapper] Pilot exit status: 0
[2026-01-08 05:06:09] 2026-01-08 03:49:34,858 [wrapper] pandaids: 6962319594
[2026-01-08 05:06:09] 2026-01-08 03:49:35,028 [wrapper] cleanup supervisor_pilot 1509412 1257234
[2026-01-08 05:06:09] 2026-01-08 03:49:35,032 [wrapper] Test setup, not cleaning
[2026-01-08 05:06:09] 2026-01-08 03:49:35,036 [wrapper] apfmon messages muted
[2026-01-08 05:06:09] 2026-01-08 03:49:35,039 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:06:09] 2026-01-08 03:49:35,043 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:06:09]  *** Error codes and diagnostics ***
[2026-01-08 05:06:09]     "exeErrorCode": 0,
[2026-01-08 05:06:09]     "exeErrorDiag": "",
[2026-01-08 05:06:09]     "pilotErrorCode": 0,
[2026-01-08 05:06:09]     "pilotErrorDiag": "",
[2026-01-08 05:06:09]  *** Listing of results directory ***
[2026-01-08 05:06:09] total 446480
[2026-01-08 05:06:09] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc       100 Jan  8 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:06:09] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 00:21 run_atlas
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc       105 Jan  8 00:21 job.xml
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc      6691 Jan  8 01:19 init_data.xml
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc 225917383 Jan  8 01:19 EVNT.47898824._000585.pool.root.1
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:19 start_atlas.sh
[2026-01-08 05:06:09] drwxrwx--x 2 boinc boinc      4096 Jan  8 01:19 shared
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc    592403 Jan  8 01:19 input.tar.gz
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc         0 Jan  8 01:19 boinc_lockfile
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc      2519 Jan  8 01:19 pandaJob.out
[2026-01-08 05:06:09] -rw------- 1 boinc boinc    989777 Jan  8 01:20 agis_schedconf.cvmfs.json
[2026-01-08 05:06:09] drwx------ 5 boinc boinc      4096 Jan  8 01:20 pilot3
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc       529 Jan  8 04:47 boinc_task_state.xml
[2026-01-08 05:06:09] -rw------- 1 boinc boinc 223138085 Jan  8 04:48 HITS.47898826._013471.pool.root.1
[2026-01-08 05:06:09] -rw------- 1 boinc boinc      1027 Jan  8 04:48 memory_monitor_summary.json
[2026-01-08 05:06:09] -rw------- 1 boinc boinc   1516240 Jan  8 04:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:06:09] -rw------- 1 boinc boinc    370525 Jan  8 04:48 log.47898826._013471.job.log.tgz.1
[2026-01-08 05:06:09] -rw------- 1 boinc boinc      7789 Jan  8 04:48 heartbeat.json
[2026-01-08 05:06:09] -rw------- 1 boinc boinc        95 Jan  8 04:48 pilot_heartbeat.json
[2026-01-08 05:06:09] -rw------- 1 boinc boinc      5094 Jan  8 04:49 pilotlog.txt
[2026-01-08 05:06:09] -rw------- 1 boinc boinc   1741758 Jan  8 04:49 log.47898826._013471.job.log.1
[2026-01-08 05:06:09] -rw------- 1 boinc boinc       357 Jan  8 04:49 output.list
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc       620 Jan  8 04:49 runtime_log
[2026-01-08 05:06:09] -rw------- 1 boinc boinc   2129920 Jan  8 04:49 result.tar.gz
[2026-01-08 05:06:09] -rw------- 1 boinc boinc       666 Jan  8 04:49 Rq6NDmunpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyriKDmwJzYtn.diag
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc      9223 Jan  8 04:49 runtime_log.err
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc        26 Jan  8 05:05 wrapper_checkpoint.txt
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc      8192 Jan  8 05:06 boinc_mmap_file
[2026-01-08 05:06:09] -rw-r--r-- 1 boinc boinc     20867 Jan  8 05:06 stderr.txt
[2026-01-08 05:06:09] HITS file was successfully produced:
[2026-01-08 05:06:09] -rw------- 1 boinc boinc 223138085 Jan  8 04:48 shared/HITS.pool.root.1
[2026-01-08 05:06:09]  *** Contents of shared directory: ***
[2026-01-08 05:06:09] total 441220
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc 225917383 Jan  8 01:19 ATLAS.root_0
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:19 start_atlas.sh
[2026-01-08 05:06:09] -rw-r--r-- 2 boinc boinc    592403 Jan  8 01:19 input.tar.gz
[2026-01-08 05:06:09] -rw------- 1 boinc boinc 223138085 Jan  8 04:48 HITS.pool.root.1
[2026-01-08 05:06:09] -rw------- 1 boinc boinc   2129920 Jan  8 04:49 result.tar.gz
05:06:10 (1252351): run_atlas exited; CPU time 48343.938129
05:06:10 (1252351): called boinc_finish(0)

</stderr_txt>
]]>

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