Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:22:13 (3549519): wrapper (7.7.26015): starting
04:22:13 (3549519): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 04:22:13] Arguments: --nthreads 4
[2026-01-09 04:22:13] Threads: 4
[2026-01-09 04:22:13] Checking for CVMFS
[2026-01-09 04:22:13] No cvmfs_config command found, will try listing directly
[2026-01-09 04:22:13] CVMFS is ok
[2026-01-09 04:22:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:22:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:22:13] Further information can be found at the LHC@home message board.
[2026-01-09 04:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:22:13] Checking for apptainer binary...
[2026-01-09 04:22:13] which: no apptainer in ((null))
[2026-01-09 04:22:13] apptainer is not installed, using version from CVMFS
[2026-01-09 04:22:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:22:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-01-09 04:22:13] apptainer works
[2026-01-09 04:22:13] Set ATHENA_PROC_NUMBER=4
[2026-01-09 04:22:13] Set ATHENA_CORE_NUMBER=4
[2026-01-09 04:22:13] Starting ATLAS job with PandaID=6962320020
[2026-01-09 04:22:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:09:07]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:09:07] 2026-01-09 07:06:44,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:09:07] 2026-01-09 07:06:45,993 | INFO     | time since job start (13456s) is within the limit (174528.0s)
[2026-01-09 08:09:07] 2026-01-09 07:06:47,392 | INFO     | monitor loop #917: job 0:6962320020 is in state 'finished'
[2026-01-09 08:09:07] 2026-01-09 07:06:47,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:09:07] 2026-01-09 07:06:47,999 | INFO     | time since job start (13458s) is within the limit (174528.0s)
[2026-01-09 08:09:07] 2026-01-09 07:06:49,894 | INFO     | monitor loop #918: job 0:6962320020 is in state 'finished'
[2026-01-09 08:09:07] 2026-01-09 07:06:49,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:09:07] 2026-01-09 07:06:49,993 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 08:09:07] 2026-01-09 07:06:50,004 | INFO     | time since job start (13461s) is within the limit (174528.0s)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,014 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2682.0198984375
[2026-01-09 08:09:07] 2026-01-09 07:06:50,038 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6962320020/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,039 | INFO     | extracted standard info from prmon json
[2026-01-09 08:09:07] 2026-01-09 07:06:50,039 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:09:07] 2026-01-09 07:06:50,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:09:07] 2026-01-09 07:06:50,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:09:07] 2026-01-09 07:06:50,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:09:07] 2026-01-09 07:06:50,043 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:09:07] 2026-01-09 07:06:50,044 | INFO     | sum of square deviations: 3301699115.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,045 | INFO     | sum of deviations: -44361219100.00001
[2026-01-09 08:09:07] 2026-01-09 07:06:50,046 | INFO     | mean x: 1767935663.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,046 | INFO     | mean y: 2387601.381818182
[2026-01-09 08:09:07] 2026-01-09 07:06:50,046 | INFO     | intersect: 23756151524.60575
[2026-01-09 08:09:07] 2026-01-09 07:06:50,046 | INFO     | chi2: 1.4472579481641799
[2026-01-09 08:09:07] 2026-01-09 07:06:50,046 | INFO     | sum of square deviations: 3081657780.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,048 | INFO     | sum of deviations: -42797979420.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,048 | INFO     | mean x: 1767935511.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,048 | INFO     | mean y: 2388684.9720930234
[2026-01-09 08:09:07] 2026-01-09 07:06:50,048 | INFO     | intersect: 24555428969.563713
[2026-01-09 08:09:07] 2026-01-09 07:06:50,049 | INFO     | chi2: 1.4434601501712452
[2026-01-09 08:09:07] 2026-01-09 07:06:50,049 | INFO     | current chi2=1.4434601501712452 (change=0.2624133450261653 %)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,049 | INFO     | right removable region: 214
[2026-01-09 08:09:07] 2026-01-09 07:06:50,049 | INFO     | sum of square deviations: 3081657780.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | sum of deviations: -66198811071.00001
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | mean x: 1767935816.0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | mean y: 2402480.0139534883
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | intersect: 37980418672.66148
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | chi2: 0.2284143826642758
[2026-01-09 08:09:07] 2026-01-09 07:06:50,051 | INFO     | current chi2=0.2284143826642758 (change=84.21743802105111 %)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,052 | INFO     | sum of square deviations: 2871616632.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,053 | INFO     | sum of deviations: -56268886085.50001
[2026-01-09 08:09:07] 2026-01-09 07:06:50,053 | INFO     | mean x: 1767935968.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,053 | INFO     | mean y: 2395265.7952380953
[2026-01-09 08:09:07] 2026-01-09 07:06:50,053 | INFO     | intersect: 34644828553.06121
[2026-01-09 08:09:07] 2026-01-09 07:06:50,054 | INFO     | chi2: 0.20480190387874475
[2026-01-09 08:09:07] 2026-01-09 07:06:50,054 | INFO     | current chi2=0.20480190387874475 (change=10.337562157912249 %)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,054 | INFO     | left removable region: 20
[2026-01-09 08:09:07] 2026-01-09 07:06:50,054 | INFO     | sum of square deviations: 2263977332.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,055 | INFO     | sum of deviations: -33440476543.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | mean x: 1767936090.5
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | mean y: 2379653.283505155
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | intersect: 26115991532.731216
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | chi2: 0.11032944401636754
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | current memory leak: -14.77 B/s (using 194 data points, chi2=0.11)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,056 | INFO     | could have reported an average CPU frequency of 2686 MHz (11 samples)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | ..............................
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . Timing measurements:
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . get job = 0 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . initial setup = 1 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . payload setup = 9 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . stage-in = 0 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . payload execution = 13419 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . stage-out = 0 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | . log creation = 0 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,057 | INFO     | ..............................
[2026-01-09 08:09:07] 2026-01-09 07:06:50,186 | INFO     | 
[2026-01-09 08:09:07] 2026-01-09 07:06:50,186 | INFO     | job summary report
[2026-01-09 08:09:07] 2026-01-09 07:06:50,186 | INFO     | --------------------------------------------------
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | PanDA job id: 6962320020
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | task id: 47898826
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | errors: (none)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | pilot state: finished 
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | transexitcode: 0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | exeerrorcode: 0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | exeerrordiag: 
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | exitcode: 0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | exitmsg: OK
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | cpuconsumptiontime: 51647 s
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | nevents: 400
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | neventsw: 0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | pid: 3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:50,187 | INFO     | pgrp: 3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | corecount: 4
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | event service: False
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | sizes: {0: 2283810, 1: 2284009, 7: 2284271, 11: 2284299, 13432: 2315186, 13433: 2315185, 13434: 2324391, 13436: 2324447, 13442: 2324641}
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | --------------------------------------------------
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | 
[2026-01-09 08:09:07] 2026-01-09 07:06:50,188 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,216 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,217 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,217 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,217 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:09:07] 2026-01-09 07:06:50,217 | INFO     | job 6962320020 has completed (purged errors)
[2026-01-09 08:09:07] 2026-01-09 07:06:50,217 | INFO     | overall cleanup function is called
[2026-01-09 08:09:07] 2026-01-09 07:06:51,227 | INFO     | --- collectZombieJob: --- 10, [3561289]
[2026-01-09 08:09:07] 2026-01-09 07:06:51,228 | INFO     | zombie collector waiting for pid 3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:51,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:09:07] 2026-01-09 07:06:51,228 | INFO     | collected zombie processes
[2026-01-09 08:09:07] 2026-01-09 07:06:51,228 | INFO     | will attempt to kill all subprocesses of pid=3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:52,082 | INFO     | process IDs to be killed: [3561289] (in reverse order)
[2026-01-09 08:09:07] 2026-01-09 07:06:52,329 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:09:07] 2026-01-09 07:06:52,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:09:07] 2026-01-09 07:06:52,367 | INFO     | did not find any defunct processes belonging to 3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:52,403 | INFO     | did not find any defunct processes belonging to 3561289
[2026-01-09 08:09:07] 2026-01-09 07:06:52,403 | INFO     | ready for new job
[2026-01-09 08:09:07] 2026-01-09 07:06:52,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:09:07] 2026-01-09 07:06:52,406 | INFO     | ***************************************
[2026-01-09 08:09:07] 2026-01-09 07:06:52,406 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:09:07] 2026-01-09 07:06:52,406 | INFO     | ***************************************
[2026-01-09 08:09:07] 2026-01-09 07:06:52,406 | INFO     | 
[2026-01-09 08:09:07] 2026-01-09 07:06:52,416 | INFO     | architecture information:
[2026-01-09 08:09:07] 2026-01-09 07:06:52,416 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:09:07] 2026-01-09 07:06:52,438 | INFO     | cat /etc/os-release:
[2026-01-09 08:09:07] NAME="CentOS Linux"
[2026-01-09 08:09:07] VERSION="7 (Core)"
[2026-01-09 08:09:07] ID="centos"
[2026-01-09 08:09:07] ID_LIKE="rhel fedora"
[2026-01-09 08:09:07] VERSION_ID="7"
[2026-01-09 08:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:09:07] ANSI_COLOR="0;31"
[2026-01-09 08:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:09:07] HOME_URL="https://www.centos.org/"
[2026-01-09 08:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:09:07] 
[2026-01-09 08:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:09:07] 
[2026-01-09 08:09:07] 2026-01-09 07:06:52,439 | INFO     | ***************************************
[2026-01-09 08:09:07] 2026-01-09 07:06:52,943 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-09 08:09:07] 2026-01-09 07:06:52,967 | INFO     | sufficient remaining disk space (3307147886592 B)
[2026-01-09 08:09:07] 2026-01-09 07:06:52,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:09:07] 2026-01-09 07:06:52,968 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:09:07] 2026-01-09 07:06:52,968 | INFO     | update_server=False
[2026-01-09 08:09:07] 2026-01-09 07:06:52,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:09:07] 2026-01-09 07:06:52,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:09:07] 2026-01-09 07:06:53,035 | INFO     | all job control threads have been joined
[2026-01-09 08:09:07] 2026-01-09 07:06:53,346 | INFO     | all data control threads have been joined
[2026-01-09 08:09:07] 2026-01-09 07:06:53,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:09:07] 2026-01-09 07:06:53,403 | INFO     | aborting loop
[2026-01-09 08:09:07] 2026-01-09 07:06:53,451 | INFO     | all payload control threads have been joined
[2026-01-09 08:09:07] 2026-01-09 07:06:53,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:09:07] 2026-01-09 07:06:53,973 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,041 | INFO     | [job] control thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,158 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,315 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,334 | INFO     | [job] validate thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,352 | INFO     | [data] control thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,373 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,408 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,419 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,453 | INFO     | [payload] control thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,667 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,681 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,974 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:54,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:55,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:09:07] 2026-01-09 07:06:56,170 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:06:57,858 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:09:07] 2026-01-09 07:07:24,043 | INFO     | PID=3553853 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:09:07] 2026-01-09 07:07:24,043 | INFO     | .. there are 5 such processes running
[2026-01-09 08:09:07] 2026-01-09 07:07:24,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:09:07] 2026-01-09 07:07:24,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:09:07] 2026-01-09 07:07:24,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:09:07] 2026-01-09 07:07:27,357 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-01-09 08:09:07] 2026-01-09 07:07:50,963 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:09:07] 2026-01-09 07:07:53,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22511877285696)>', '<ExcThread(monitor, started 22511641134848)>']
[2026-01-09 08:09:07] 2026-01-09 07:07:53,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:09:07] 2026-01-09 07:07:53,190 | INFO     | [monitor] control thread has ended
[2026-01-09 08:09:07] 2026-01-09 07:07:58,041 | INFO     | all workflow threads have been joined
[2026-01-09 08:09:07] 2026-01-09 07:07:58,042 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:09:07] 2026-01-09 07:07:58,042 | INFO     | traces error code: 0
[2026-01-09 08:09:07] 2026-01-09 07:07:58,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:09:07] 2026-01-09 07:07:58,232 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:09:07] 2026-01-09 07:07:58,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:09:07] 2026-01-09 07:07:58,241 [wrapper] pilotpid: 3553853
[2026-01-09 08:09:07] 2026-01-09 07:07:58,245 [wrapper] Pilot exit status: 0
[2026-01-09 08:09:07] 2026-01-09 07:07:58,261 [wrapper] pandaids: 6962320020
[2026-01-09 08:09:07] 2026-01-09 07:07:58,446 [wrapper] cleanup supervisor_pilot 3910651 3553854
[2026-01-09 08:09:07] 2026-01-09 07:07:58,450 [wrapper] Test setup, not cleaning
[2026-01-09 08:09:07] 2026-01-09 07:07:58,454 [wrapper] apfmon messages muted
[2026-01-09 08:09:07] 2026-01-09 07:07:58,458 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:09:07] 2026-01-09 07:07:58,462 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:09:07]  *** Error codes and diagnostics ***
[2026-01-09 08:09:07]     "exeErrorCode": 0,
[2026-01-09 08:09:07]     "exeErrorDiag": "",
[2026-01-09 08:09:07]     "pilotErrorCode": 0,
[2026-01-09 08:09:07]     "pilotErrorDiag": "",
[2026-01-09 08:09:07]  *** Listing of results directory ***
[2026-01-09 08:09:07] total 436360
[2026-01-09 08:09:07] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:04 queuedata.json
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc       100 Jan  9 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:09:07] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 04:22 run_atlas
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc       105 Jan  9 04:22 job.xml
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc      6691 Jan  9 04:22 init_data.xml
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc 222098816 Jan  9 04:22 EVNT.47898824._000601.pool.root.1
[2026-01-09 08:09:07] drwxrwx--x 2 boinc boinc      4096 Jan  9 04:22 shared
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc    592391 Jan  9 04:22 input.tar.gz
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:22 start_atlas.sh
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc         0 Jan  9 04:22 boinc_lockfile
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc      2519 Jan  9 04:22 pandaJob.out
[2026-01-09 08:09:07] -rw------- 1 boinc boinc    989771 Jan  9 04:22 agis_schedconf.cvmfs.json
[2026-01-09 08:09:07] drwx------ 5 boinc boinc      4096 Jan  9 04:22 pilot3
[2026-01-09 08:09:07] -rw------- 1 boinc boinc 216324377 Jan  9 08:06 HITS.47898826._013871.pool.root.1
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc       528 Jan  9 08:06 boinc_task_state.xml
[2026-01-09 08:09:07] -rw------- 1 boinc boinc      1029 Jan  9 08:06 memory_monitor_summary.json
[2026-01-09 08:09:07] -rw------- 1 boinc boinc   1516240 Jan  9 08:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:09:07] -rw------- 1 boinc boinc    384466 Jan  9 08:06 log.47898826._013871.job.log.tgz.1
[2026-01-09 08:09:07] -rw------- 1 boinc boinc        95 Jan  9 08:06 pilot_heartbeat.json
[2026-01-09 08:09:07] -rw------- 1 boinc boinc      7791 Jan  9 08:06 heartbeat.json
[2026-01-09 08:09:07] -rw------- 1 boinc boinc      4835 Jan  9 08:07 pilotlog.txt
[2026-01-09 08:09:07] -rw------- 1 boinc boinc   1864240 Jan  9 08:07 log.47898826._013871.job.log.1
[2026-01-09 08:09:07] -rw------- 1 boinc boinc       357 Jan  9 08:07 output.list
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc       620 Jan  9 08:07 runtime_log
[2026-01-09 08:09:07] -rw------- 1 boinc boinc   2263040 Jan  9 08:07 result.tar.gz
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc      9223 Jan  9 08:07 runtime_log.err
[2026-01-09 08:09:07] -rw------- 1 boinc boinc       667 Jan  9 08:07 nc3MDmIopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGndKDm0xmIIo.diag
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc        26 Jan  9 08:08 wrapper_checkpoint.txt
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc      8192 Jan  9 08:09 boinc_mmap_file
[2026-01-09 08:09:07] -rw-r--r-- 1 boinc boinc     21137 Jan  9 08:09 stderr.txt
[2026-01-09 08:09:07] HITS file was successfully produced:
[2026-01-09 08:09:07] -rw------- 1 boinc boinc 216324377 Jan  9 08:06 shared/HITS.pool.root.1
[2026-01-09 08:09:07]  *** Contents of shared directory: ***
[2026-01-09 08:09:07] total 430968
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc 222098816 Jan  9 04:22 ATLAS.root_0
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc    592391 Jan  9 04:22 input.tar.gz
[2026-01-09 08:09:07] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:22 start_atlas.sh
[2026-01-09 08:09:07] -rw------- 1 boinc boinc 216324377 Jan  9 08:06 HITS.pool.root.1
[2026-01-09 08:09:07] -rw------- 1 boinc boinc   2263040 Jan  9 08:07 result.tar.gz
08:09:08 (3549519): run_atlas exited; CPU time 52605.604885
08:09:08 (3549519): called boinc_finish(0)

</stderr_txt>
]]>

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