Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:20 (10184): wrapper (7.7.26015): starting
00:12:20 (10184): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 00:12:20] Arguments: --nthreads 8
[2026-01-08 00:12:20] Threads: 8
[2026-01-08 00:12:20] Checking for CVMFS
[2026-01-08 00:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:12:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:12:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:12:24] 2.11.2.0 21292 33161 131056 154883 0 53 24513552 25165824 1044 130560 0 6946321 99.544 11245201 5438 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 00:12:24] CVMFS is ok
[2026-01-08 00:12:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:12:24] Checking for apptainer binary...
[2026-01-08 00:12:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:12:24] Running /usr/bin/apptainer --version
[2026-01-08 00:12:24] apptainer version 1.3.2-1.el7
[2026-01-08 00:12:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:12:42] cg-vwn383.simple-grid.lan
[2026-01-08 00:12:42] apptainer works
[2026-01-08 00:12:42] Set ATHENA_PROC_NUMBER=8
[2026-01-08 00:12:42] Set ATHENA_CORE_NUMBER=8
[2026-01-08 00:12:43] Starting ATLAS job with PandaID=6962319247
[2026-01-08 00:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:15:43]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:15:43] 2026-01-08 04:14:37,519 | INFO     | time since job start (17855s) is within the limit (174528.0s)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,283 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 05:15:43] 2026-01-08 04:14:38,284 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 05:15:43] 2026-01-08 04:14:38,286 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6962319247/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,287 | INFO     | extracted standard info from prmon json
[2026-01-08 05:15:43] 2026-01-08 04:14:38,287 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:15:43] 2026-01-08 04:14:38,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:15:43] 2026-01-08 04:14:38,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:15:43] 2026-01-08 04:14:38,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:15:43] 2026-01-08 04:14:38,294 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:15:43] 2026-01-08 04:14:38,295 | INFO     | sum of square deviations: 6953769450.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,297 | INFO     | sum of deviations: 116257306523.99995
[2026-01-08 05:15:43] 2026-01-08 04:14:38,298 | INFO     | mean x: 1767836960.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,298 | INFO     | mean y: 2450044.7517730496
[2026-01-08 05:15:43] 2026-01-08 04:14:38,298 | INFO     | intersect: -29553313180.404766
[2026-01-08 05:15:43] 2026-01-08 04:14:38,298 | INFO     | chi2: 9.150507045449796
[2026-01-08 05:15:43] 2026-01-08 04:14:38,299 | INFO     | sum of square deviations: 6590404498.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,308 | INFO     | sum of deviations: 132580292741.99997
[2026-01-08 05:15:43] 2026-01-08 04:14:38,308 | INFO     | mean x: 1767836808.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,308 | INFO     | mean y: 2456782.9819494584
[2026-01-08 05:15:43] 2026-01-08 04:14:38,309 | INFO     | intersect: -35561418180.36067
[2026-01-08 05:15:43] 2026-01-08 04:14:38,309 | INFO     | chi2: 8.460662701686344
[2026-01-08 05:15:43] 2026-01-08 04:14:38,309 | INFO     | current chi2=8.460662701686344 (change=7.538864680799147 %)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,309 | INFO     | right removable region: 276
[2026-01-08 05:15:43] 2026-01-08 04:14:38,314 | INFO     | sum of square deviations: 6590404498.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,317 | INFO     | sum of deviations: 15579226698.999977
[2026-01-08 05:15:43] 2026-01-08 04:14:38,317 | INFO     | mean x: 1767837113.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,317 | INFO     | mean y: 2492281.3501805053
[2026-01-08 05:15:43] 2026-01-08 04:14:38,317 | INFO     | intersect: -4176543339.1023593
[2026-01-08 05:15:43] 2026-01-08 04:14:38,318 | INFO     | chi2: 3.9190189849198154
[2026-01-08 05:15:43] 2026-01-08 04:14:38,318 | INFO     | current chi2=3.9190189849198154 (change=57.17156475095446 %)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,319 | INFO     | sum of square deviations: 6239923508.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,321 | INFO     | sum of deviations: -60270219241.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,321 | INFO     | mean x: 1767837265.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,322 | INFO     | mean y: 2525234.6838235296
[2026-01-08 05:15:43] 2026-01-08 04:14:38,322 | INFO     | intersect: 17077724864.533983
[2026-01-08 05:15:43] 2026-01-08 04:14:38,322 | INFO     | chi2: 1.097594986456217
[2026-01-08 05:15:43] 2026-01-08 04:14:38,322 | INFO     | current chi2=1.097594986456217 (change=71.99311892390145 %)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,323 | INFO     | sum of square deviations: 5902093918.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,325 | INFO     | sum of deviations: -70118351614.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,326 | INFO     | mean x: 1767837418.0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,326 | INFO     | mean y: 2529640.1647940073
[2026-01-08 05:15:43] 2026-01-08 04:14:38,326 | INFO     | intersect: 21004880228.600464
[2026-01-08 05:15:43] 2026-01-08 04:14:38,326 | INFO     | chi2: 0.9926288190343091
[2026-01-08 05:15:43] 2026-01-08 04:14:38,326 | INFO     | current chi2=0.9926288190343091 (change=9.563287798973095 %)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,327 | INFO     | left removable region: 30
[2026-01-08 05:15:43] 2026-01-08 04:14:38,327 | INFO     | sum of square deviations: 4616114457.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,329 | INFO     | sum of deviations: -28501441963.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,329 | INFO     | mean x: 1767837692.5
[2026-01-08 05:15:43] 2026-01-08 04:14:38,330 | INFO     | mean y: 2526731.1829268294
[2026-01-08 05:15:43] 2026-01-08 04:14:38,330 | INFO     | intersect: 10917750748.605701
[2026-01-08 05:15:43] 2026-01-08 04:14:38,330 | INFO     | chi2: 0.1674886813945899
[2026-01-08 05:15:43] 2026-01-08 04:14:38,336 | INFO     | current memory leak: -6.17 B/s (using 246 data points, chi2=0.17)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,337 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | ..............................
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . Timing measurements:
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . get job = 0 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . initial setup = 8 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . payload setup = 162 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . stage-in = 0 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . payload execution = 17348 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . stage-out = 3 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,338 | INFO     | . log creation = 1 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,339 | INFO     | ..............................
[2026-01-08 05:15:43] 2026-01-08 04:14:38,492 | INFO     | 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,492 | INFO     | job summary report
[2026-01-08 05:15:43] 2026-01-08 04:14:38,492 | INFO     | --------------------------------------------------
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | PanDA job id: 6962319247
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | task id: 47898826
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | errors: (none)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | pilot state: finished 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | transexitcode: 0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | exeerrorcode: 0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | exeerrordiag: 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,493 | INFO     | exitcode: 0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | exitmsg: OK
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | cpuconsumptiontime: 78161 s
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | nevents: 400
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | neventsw: 0
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | pid: 20627
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | pgrp: 20627
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | corecount: 8
[2026-01-08 05:15:43] 2026-01-08 04:14:38,494 | INFO     | event service: False
[2026-01-08 05:15:43] 2026-01-08 04:14:38,495 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 33: 2284054, 44: 2284110, 55: 2284266, 66: 2284294, 76: 2284322, 87: 2284378, 98: 2284406, 109: 2284714, 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,495 | INFO     | --------------------------------------------------
[2026-01-08 05:15:43] 2026-01-08 04:14:38,495 | INFO     | 
[2026-01-08 05:15:43] 2026-01-08 04:14:38,495 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2026-01-08 05:15:43] 2026-01-08 04:14:38,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,997 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:15:43] 2026-01-08 04:14:38,998 | INFO     | job 6962319247 has completed (purged errors)
[2026-01-08 05:15:43] 2026-01-08 04:14:38,998 | INFO     | overall cleanup function is called
[2026-01-08 05:15:43] 2026-01-08 04:14:40,007 | INFO     | --- collectZombieJob: --- 10, [20627]
[2026-01-08 05:15:43] 2026-01-08 04:14:40,007 | INFO     | zombie collector waiting for pid 20627
[2026-01-08 05:15:43] 2026-01-08 04:14:40,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:15:43] 2026-01-08 04:14:40,007 | INFO     | collected zombie processes
[2026-01-08 05:15:43] 2026-01-08 04:14:40,007 | INFO     | will attempt to kill all subprocesses of pid=20627
[2026-01-08 05:15:43] 2026-01-08 04:14:40,109 | INFO     | process IDs to be killed: [20627] (in reverse order)
[2026-01-08 05:15:43] 2026-01-08 04:14:40,905 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:15:43] 2026-01-08 04:14:40,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:15:43] 2026-01-08 04:14:40,908 | INFO     | did not find any defunct processes belonging to 20627
[2026-01-08 05:15:43] 2026-01-08 04:14:40,909 | INFO     | did not find any defunct processes belonging to 20627
[2026-01-08 05:15:43] 2026-01-08 04:14:40,910 | INFO     | ready for new job
[2026-01-08 05:15:43] 2026-01-08 04:14:40,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:15:43] 2026-01-08 04:14:40,912 | INFO     | ***************************************
[2026-01-08 05:15:43] 2026-01-08 04:14:40,912 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:15:43] 2026-01-08 04:14:40,912 | INFO     | ***************************************
[2026-01-08 05:15:43] 2026-01-08 04:14:40,912 | INFO     | 
[2026-01-08 05:15:43] 2026-01-08 04:14:40,913 | INFO     | pilot is running in a VM
[2026-01-08 05:15:43] 2026-01-08 04:14:40,913 | INFO     | architecture information:
[2026-01-08 05:15:43] 2026-01-08 04:14:40,928 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:15:43] 2026-01-08 04:14:41,266 | INFO     | cat /etc/os-release:
[2026-01-08 05:15:43] NAME="CentOS Linux"
[2026-01-08 05:15:43] VERSION="7 (Core)"
[2026-01-08 05:15:43] ID="centos"
[2026-01-08 05:15:43] ID_LIKE="rhel fedora"
[2026-01-08 05:15:43] VERSION_ID="7"
[2026-01-08 05:15:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:15:43] ANSI_COLOR="0;31"
[2026-01-08 05:15:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:15:43] HOME_URL="https://www.centos.org/"
[2026-01-08 05:15:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:15:43] 
[2026-01-08 05:15:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:15:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:15:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:15:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:15:43] 
[2026-01-08 05:15:43] 2026-01-08 04:14:41,267 | INFO     | ***************************************
[2026-01-08 05:15:43] 2026-01-08 04:14:41,770 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2026-01-08 05:15:43] 2026-01-08 04:14:42,027 | INFO     | sufficient remaining disk space (497311285248 B)
[2026-01-08 05:15:43] 2026-01-08 04:14:42,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:15:43] 2026-01-08 04:14:42,028 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:15:43] 2026-01-08 04:14:42,028 | INFO     | update_server=False
[2026-01-08 05:15:43] 2026-01-08 04:14:42,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:15:43] 2026-01-08 04:14:42,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:15:43] 2026-01-08 04:14:42,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:15:43] 2026-01-08 04:14:43,008 | INFO     | all data control threads have been joined
[2026-01-08 05:15:43] 2026-01-08 04:14:43,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:15:43] 2026-01-08 04:14:43,010 | INFO     | aborting loop
[2026-01-08 05:15:43] 2026-01-08 04:14:43,034 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,048 | INFO     | all payload control threads have been joined
[2026-01-08 05:15:43] 2026-01-08 04:14:43,105 | INFO     | [job] validate thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,197 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,281 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,330 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,347 | INFO     | all job control threads have been joined
[2026-01-08 05:15:43] 2026-01-08 04:14:43,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:15:43] 2026-01-08 04:14:43,650 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,830 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:43,947 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,015 | INFO     | [data] control thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,016 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,054 | INFO     | [payload] control thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,134 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,355 | INFO     | [job] control thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,518 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:44,555 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:14:46,724 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:15:43] 2026-01-08 04:15:10,683 | INFO     | PID=14150 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 05:15:43] 2026-01-08 04:15:10,683 | INFO     | .. there are 2 such processes running
[2026-01-08 05:15:43] 2026-01-08 04:15:10,683 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:15:43] 2026-01-08 04:15:10,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:15:43] 2026-01-08 04:15:10,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:15:43] 2026-01-08 04:15:32,562 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:15:43] 2026-01-08 04:15:33,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770528732992)>', '<ExcThread(monitor, started 139770088900352)>']
[2026-01-08 05:15:43] 2026-01-08 04:15:33,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:15:43] 2026-01-08 04:15:33,822 | INFO     | [monitor] control thread has ended
[2026-01-08 05:15:43] 2026-01-08 04:15:38,093 | INFO     | all workflow threads have been joined
[2026-01-08 05:15:43] 2026-01-08 04:15:38,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:15:43] 2026-01-08 04:15:38,094 | INFO     | traces error code: 0
[2026-01-08 05:15:43] 2026-01-08 04:15:38,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:15:43] 2026-01-08 04:15:38,667 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:15:43] 2026-01-08 04:15:38,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:15:43] 2026-01-08 04:15:38,897 [wrapper] pilotpid: 14150
[2026-01-08 05:15:43] 2026-01-08 04:15:39,031 [wrapper] Pilot exit status: 0
[2026-01-08 05:15:43] 2026-01-08 04:15:39,501 [wrapper] pandaids: 6962319247
[2026-01-08 05:15:43] 2026-01-08 04:15:40,491 [wrapper] cleanup supervisor_pilot 30549 14151
[2026-01-08 05:15:43] 2026-01-08 04:15:40,612 [wrapper] Test setup, not cleaning
[2026-01-08 05:15:43] 2026-01-08 04:15:40,711 [wrapper] apfmon messages muted
[2026-01-08 05:15:43] 2026-01-08 04:15:40,807 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:15:43] 2026-01-08 04:15:40,906 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:15:43]  *** Error codes and diagnostics ***
[2026-01-08 05:15:43]     "exeErrorCode": 0,
[2026-01-08 05:15:43]     "exeErrorDiag": "",
[2026-01-08 05:15:43]     "pilotErrorCode": 0,
[2026-01-08 05:15:43]     "pilotErrorDiag": "",
[2026-01-08 05:15:43]  *** Listing of results directory ***
[2026-01-08 05:15:43] total 443428
[2026-01-08 05:15:43] -rwx------. 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc       100 Jan  8 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:15:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 00:12 run_atlas
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc       105 Jan  8 00:12 job.xml
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc 224703009 Jan  8 00:12 EVNT.47898824._000564.pool.root.1
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc    592393 Jan  8 00:12 input.tar.gz
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc      6391 Jan  8 00:12 init_data.xml
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc     15847 Jan  8 00:12 start_atlas.sh
[2026-01-08 05:15:43] drwxrwx--x. 2 boinc boinc        68 Jan  8 00:12 shared
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc         0 Jan  8 00:12 boinc_lockfile
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc      2519 Jan  8 00:12 pandaJob.out
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc    989785 Jan  8 00:16 agis_schedconf.cvmfs.json
[2026-01-08 05:15:43] drwx------. 5 boinc boinc      4096 Jan  8 00:17 pilot3
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc 219689864 Jan  8 05:11 HITS.47898826._013155.pool.root.1
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc       531 Jan  8 05:11 boinc_task_state.xml
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc      1021 Jan  8 05:12 memory_monitor_summary.json
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc   1516240 Jan  8 05:12 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc    503730 Jan  8 05:12 log.47898826._013155.job.log.tgz.1
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc      7783 Jan  8 05:14 heartbeat.json
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc        95 Jan  8 05:14 pilot_heartbeat.json
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc      4885 Jan  8 05:15 pilotlog.txt
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc        28 Jan  8 05:15 wrapper_checkpoint.txt
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:15 boinc_mmap_file
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc   2387917 Jan  8 05:15 log.47898826._013155.job.log.1
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc       357 Jan  8 05:15 output.list
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:15 runtime_log
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc   2908160 Jan  8 05:15 result.tar.gz
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc      8833 Jan  8 05:15 runtime_log.err
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc       657 Jan  8 05:15 1k6NDmhnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwpiKDmuHaCen.diag
[2026-01-08 05:15:43] -rw-r--r--. 1 boinc boinc     20777 Jan  8 05:15 stderr.txt
[2026-01-08 05:15:43] HITS file was successfully produced:
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc 219689864 Jan  8 05:11 shared/HITS.pool.root.1
[2026-01-08 05:15:43]  *** Contents of shared directory: ***
[2026-01-08 05:15:43] total 437420
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc 224703009 Jan  8 00:12 ATLAS.root_0
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc    592393 Jan  8 00:12 input.tar.gz
[2026-01-08 05:15:43] -rw-r--r--. 2 boinc boinc     15847 Jan  8 00:12 start_atlas.sh
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc 219689864 Jan  8 05:11 HITS.pool.root.1
[2026-01-08 05:15:43] -rw-------. 1 boinc boinc   2908160 Jan  8 05:15 result.tar.gz
05:15:45 (10184): run_atlas exited; CPU time 78350.069932
05:15:45 (10184): called boinc_finish(0)

</stderr_txt>
]]>

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