Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:44:09 (2608098): wrapper (7.7.26015): starting
14:44:09 (2608098): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 14:44:09] Arguments: --nthreads 4
[2026-01-09 14:44:09] Threads: 4
[2026-01-09 14:44:09] Checking for CVMFS
[2026-01-09 14:44:09] No cvmfs_config command found, will try listing directly
[2026-01-09 14:44:09] CVMFS is ok
[2026-01-09 14:44:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:44:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:44:09] Further information can be found at the LHC@home message board.
[2026-01-09 14:44:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:44:09] Checking for apptainer binary...
[2026-01-09 14:44:09] which: no apptainer in ((null))
[2026-01-09 14:44:09] apptainer is not installed, using version from CVMFS
[2026-01-09 14:44:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:44:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-01-09 14:44:09] apptainer works
[2026-01-09 14:44:09] Set ATHENA_PROC_NUMBER=4
[2026-01-09 14:44:09] Set ATHENA_CORE_NUMBER=4
[2026-01-09 14:44:09] Starting ATLAS job with PandaID=6962318753
[2026-01-09 14:44:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:48:00]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:48:00] 2026-01-09 19:45:21,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,089 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:48:00] 2026-01-09 19:45:22,096 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2603.9983249999996
[2026-01-09 20:48:00] 2026-01-09 19:45:22,104 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962318753/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,105 | INFO     | extracted standard info from prmon json
[2026-01-09 20:48:00] 2026-01-09 19:45:22,105 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:48:00] 2026-01-09 19:45:22,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:48:00] 2026-01-09 19:45:22,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:48:00] 2026-01-09 19:45:22,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:48:00] 2026-01-09 19:45:22,113 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:48:00] 2026-01-09 19:45:22,114 | INFO     | sum of square deviations: 13872556567.819798
[2026-01-09 20:48:00] 2026-01-09 19:45:22,117 | INFO     | sum of deviations: -89166234294.87605
[2026-01-09 20:48:00] 2026-01-09 19:45:22,117 | INFO     | mean x: 1767977086.0225353
[2026-01-09 20:48:00] 2026-01-09 19:45:22,118 | INFO     | mean y: 2384236.4845070424
[2026-01-09 20:48:00] 2026-01-09 19:45:22,118 | INFO     | intersect: 11366104997.655844
[2026-01-09 20:48:00] 2026-01-09 19:45:22,118 | INFO     | time since job start (21660s) is within the limit (174528.0s)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,119 | INFO     | chi2: 2.272527092211687
[2026-01-09 20:48:00] 2026-01-09 19:45:22,120 | INFO     | sum of square deviations: 13294603985.317081
[2026-01-09 20:48:00] 2026-01-09 19:45:22,124 | INFO     | sum of deviations: -66541560320.368576
[2026-01-09 20:48:00] 2026-01-09 19:45:22,124 | INFO     | mean x: 1767976933.5228572
[2026-01-09 20:48:00] 2026-01-09 19:45:22,124 | INFO     | mean y: 2390144.6085714283
[2026-01-09 20:48:00] 2026-01-09 19:45:22,124 | INFO     | intersect: 8851389625.673265
[2026-01-09 20:48:00] 2026-01-09 19:45:22,125 | INFO     | chi2: 1.6130991884100658
[2026-01-09 20:48:00] 2026-01-09 19:45:22,125 | INFO     | current chi2=1.6130991884100658 (change=29.017383601787884 %)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,126 | INFO     | sum of square deviations: 12732930777.814478
[2026-01-09 20:48:00] 2026-01-09 19:45:22,130 | INFO     | sum of deviations: -64727463270.48403
[2026-01-09 20:48:00] 2026-01-09 19:45:22,130 | INFO     | mean x: 1767976781.0231884
[2026-01-09 20:48:00] 2026-01-09 19:45:22,130 | INFO     | mean y: 2390637.1855072463
[2026-01-09 20:48:00] 2026-01-09 19:45:22,130 | INFO     | intersect: 8989846404.724777
[2026-01-09 20:48:00] 2026-01-09 19:45:22,131 | INFO     | chi2: 1.6121002194656302
[2026-01-09 20:48:00] 2026-01-09 19:45:22,131 | INFO     | current chi2=1.6121002194656302 (change=0.06192855043342083 %)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,131 | INFO     | right removable region: 344
[2026-01-09 20:48:00] 2026-01-09 19:45:22,132 | INFO     | sum of square deviations: 13294599105.317081
[2026-01-09 20:48:00] 2026-01-09 19:45:22,136 | INFO     | sum of deviations: -125213720118.54282
[2026-01-09 20:48:00] 2026-01-09 19:45:22,136 | INFO     | mean x: 1767977238.5228572
[2026-01-09 20:48:00] 2026-01-09 19:45:22,136 | INFO     | mean y: 2393649.942857143
[2026-01-09 20:48:00] 2026-01-09 19:45:22,137 | INFO     | intersect: 16653892906.646122
[2026-01-09 20:48:00] 2026-01-09 19:45:22,137 | INFO     | chi2: 1.0692218162850566
[2026-01-09 20:48:00] 2026-01-09 19:45:22,138 | INFO     | current chi2=1.0692218162850566 (change=52.9500959548755 %)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,138 | INFO     | sum of square deviations: 12732921017.814478
[2026-01-09 20:48:00] 2026-01-09 19:45:22,142 | INFO     | sum of deviations: -114166552810.85507
[2026-01-09 20:48:00] 2026-01-09 19:45:22,142 | INFO     | mean x: 1767977391.0231884
[2026-01-09 20:48:00] 2026-01-09 19:45:22,143 | INFO     | mean y: 2390650.231884058
[2026-01-09 20:48:00] 2026-01-09 19:45:22,143 | INFO     | intersect: 15854517895.680845
[2026-01-09 20:48:00] 2026-01-09 19:45:22,144 | INFO     | chi2: 1.0587239344845158
[2026-01-09 20:48:00] 2026-01-09 19:45:22,144 | INFO     | current chi2=1.0587239344845158 (change=0.9818245045742716 %)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,144 | INFO     | left removable region: 20
[2026-01-09 20:48:00] 2026-01-09 19:45:22,144 | INFO     | sum of square deviations: 10546427012.848768
[2026-01-09 20:48:00] 2026-01-09 19:45:22,148 | INFO     | sum of deviations: -53573233676.36728
[2026-01-09 20:48:00] 2026-01-09 19:45:22,148 | INFO     | mean x: 1767977360.521605
[2026-01-09 20:48:00] 2026-01-09 19:45:22,149 | INFO     | mean y: 2386723.5524691357
[2026-01-09 20:48:00] 2026-01-09 19:45:22,149 | INFO     | intersect: 8983273250.748613
[2026-01-09 20:48:00] 2026-01-09 19:45:22,149 | INFO     | chi2: 0.25295932131541987
[2026-01-09 20:48:00] 2026-01-09 19:45:22,150 | INFO     | current memory leak: -5.08 B/s (using 324 data points, chi2=0.25)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,150 | INFO     | could have reported an average CPU frequency of 2559 MHz (15 samples)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,150 | INFO     | ..............................
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . Timing measurements:
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . get job = 0 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . initial setup = 1 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . payload setup = 6 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . stage-in = 0 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . payload execution = 21626 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . stage-out = 1 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | . log creation = 0 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,151 | INFO     | ..............................
[2026-01-09 20:48:00] 2026-01-09 19:45:22,371 | INFO     | 
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | job summary report
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | --------------------------------------------------
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | PanDA job id: 6962318753
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | task id: 47898826
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | errors: (none)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:48:00] 2026-01-09 19:45:22,372 | INFO     | pilot state: finished 
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | transexitcode: 0
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | exeerrorcode: 0
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | exeerrordiag: 
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | exitcode: 0
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | exitmsg: OK
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | cpuconsumptiontime: 79180 s
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | nevents: 400
[2026-01-09 20:48:00] 2026-01-09 19:45:22,373 | INFO     | neventsw: 0
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | pid: 2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | pgrp: 2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | corecount: 4
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | event service: False
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | sizes: {0: 2283980, 4: 2284242, 11: 2284270, 21637: 2318604, 21638: 2327680, 21644: 2327818}
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | --------------------------------------------------
[2026-01-09 20:48:00] 2026-01-09 19:45:22,374 | INFO     | 
[2026-01-09 20:48:00] 2026-01-09 19:45:22,375 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-09 20:48:00] 2026-01-09 19:45:22,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,397 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:48:00] 2026-01-09 19:45:22,398 | INFO     | job 6962318753 has completed (purged errors)
[2026-01-09 20:48:00] 2026-01-09 19:45:22,398 | INFO     | overall cleanup function is called
[2026-01-09 20:48:00] 2026-01-09 19:45:23,406 | INFO     | --- collectZombieJob: --- 10, [2619257]
[2026-01-09 20:48:00] 2026-01-09 19:45:23,406 | INFO     | zombie collector waiting for pid 2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:23,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:48:00] 2026-01-09 19:45:23,406 | INFO     | collected zombie processes
[2026-01-09 20:48:00] 2026-01-09 19:45:23,407 | INFO     | will attempt to kill all subprocesses of pid=2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:23,822 | INFO     | process IDs to be killed: [2619257] (in reverse order)
[2026-01-09 20:48:00] 2026-01-09 19:45:23,922 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:48:00] 2026-01-09 19:45:23,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:48:00] 2026-01-09 19:45:23,933 | INFO     | did not find any defunct processes belonging to 2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:23,943 | INFO     | did not find any defunct processes belonging to 2619257
[2026-01-09 20:48:00] 2026-01-09 19:45:23,943 | INFO     | ready for new job
[2026-01-09 20:48:00] 2026-01-09 19:45:23,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:48:00] 2026-01-09 19:45:23,946 | INFO     | ***************************************
[2026-01-09 20:48:00] 2026-01-09 19:45:23,946 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:48:00] 2026-01-09 19:45:23,946 | INFO     | ***************************************
[2026-01-09 20:48:00] 2026-01-09 19:45:23,946 | INFO     | 
[2026-01-09 20:48:00] 2026-01-09 19:45:23,949 | INFO     | architecture information:
[2026-01-09 20:48:00] 2026-01-09 19:45:23,949 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:48:00] 2026-01-09 19:45:23,965 | INFO     | cat /etc/os-release:
[2026-01-09 20:48:00] NAME="CentOS Linux"
[2026-01-09 20:48:00] VERSION="7 (Core)"
[2026-01-09 20:48:00] ID="centos"
[2026-01-09 20:48:00] ID_LIKE="rhel fedora"
[2026-01-09 20:48:00] VERSION_ID="7"
[2026-01-09 20:48:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:48:00] ANSI_COLOR="0;31"
[2026-01-09 20:48:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:48:00] HOME_URL="https://www.centos.org/"
[2026-01-09 20:48:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:48:00] 
[2026-01-09 20:48:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:48:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:48:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:48:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:48:00] 
[2026-01-09 20:48:00] 2026-01-09 19:45:23,966 | INFO     | ***************************************
[2026-01-09 20:48:00] 2026-01-09 19:45:24,469 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-09 20:48:00] 2026-01-09 19:45:24,485 | INFO     | sufficient remaining disk space (1663291097088 B)
[2026-01-09 20:48:00] 2026-01-09 19:45:24,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:48:00] 2026-01-09 19:45:24,486 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:48:00] 2026-01-09 19:45:24,486 | INFO     | update_server=False
[2026-01-09 20:48:00] 2026-01-09 19:45:24,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:48:00] 2026-01-09 19:45:24,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:48:00] 2026-01-09 19:45:25,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:48:00] 2026-01-09 19:45:25,281 | INFO     | aborting loop
[2026-01-09 20:48:00] 2026-01-09 19:45:25,291 | INFO     | all payload control threads have been joined
[2026-01-09 20:48:00] 2026-01-09 19:45:25,351 | INFO     | all data control threads have been joined
[2026-01-09 20:48:00] 2026-01-09 19:45:25,436 | INFO     | all job control threads have been joined
[2026-01-09 20:48:00] 2026-01-09 19:45:25,491 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:25,659 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:25,772 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:25,869 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,162 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,286 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,296 | INFO     | [payload] control thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,337 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,340 | INFO     | [job] validate thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,340 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,356 | INFO     | [data] control thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,442 | INFO     | [job] control thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,492 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:26,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:48:00] 2026-01-09 19:45:26,969 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:27,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:48:00] 2026-01-09 19:45:28,288 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:30,657 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:48:00] 2026-01-09 19:45:55,649 | INFO     | PID=2612159 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:48:00] 2026-01-09 19:45:55,649 | INFO     | .. there are 2 such processes running
[2026-01-09 20:48:00] 2026-01-09 19:45:55,650 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:48:00] 2026-01-09 19:45:55,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:48:00] 2026-01-09 19:45:55,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:48:00] 2026-01-09 19:45:58,363 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:48:00] 2026-01-09 19:45:59,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23026643220288)>', '<ExcThread(monitor, started 23025653114624)>']
[2026-01-09 20:48:00] 2026-01-09 19:45:59,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:48:00] 2026-01-09 19:45:59,666 | INFO     | [monitor] control thread has ended
[2026-01-09 20:48:00] 2026-01-09 19:46:04,393 | INFO     | all workflow threads have been joined
[2026-01-09 20:48:00] 2026-01-09 19:46:04,393 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:48:00] 2026-01-09 19:46:04,393 | INFO     | traces error code: 0
[2026-01-09 20:48:00] 2026-01-09 19:46:04,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:48:00] 2026-01-09 19:46:04,521 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:48:00] 2026-01-09 19:46:04,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:48:00] 2026-01-09 19:46:04,526 [wrapper] pilotpid: 2612159
[2026-01-09 20:48:00] 2026-01-09 19:46:04,529 [wrapper] Pilot exit status: 0
[2026-01-09 20:48:00] 2026-01-09 19:46:04,538 [wrapper] pandaids: 6962318753
[2026-01-09 20:48:00] 2026-01-09 19:46:04,596 [wrapper] cleanup supervisor_pilot 2828795 2612160
[2026-01-09 20:48:00] 2026-01-09 19:46:04,599 [wrapper] Test setup, not cleaning
[2026-01-09 20:48:00] 2026-01-09 19:46:04,602 [wrapper] apfmon messages muted
[2026-01-09 20:48:00] 2026-01-09 19:46:04,604 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:48:00] 2026-01-09 19:46:04,607 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:48:00]  *** Error codes and diagnostics ***
[2026-01-09 20:48:00]     "exeErrorCode": 0,
[2026-01-09 20:48:00]     "exeErrorDiag": "",
[2026-01-09 20:48:00]     "pilotErrorCode": 0,
[2026-01-09 20:48:00]     "pilotErrorDiag": "",
[2026-01-09 20:48:00]  *** Listing of results directory ***
[2026-01-09 20:48:00] total 445352
[2026-01-09 20:48:00] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:48:00] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:19 run_atlas
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:19 job.xml
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc 225719178 Jan  9 14:44 EVNT.47898824._000561.pool.root.1
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc      6423 Jan  9 14:44 init_data.xml
[2026-01-09 20:48:00] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:44 shared
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc    592400 Jan  9 14:44 input.tar.gz
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:44 boinc_lockfile
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc      2519 Jan  9 14:44 pandaJob.out
[2026-01-09 20:48:00] -rw------- 1 boinc boinc    989377 Jan  9 14:44 agis_schedconf.cvmfs.json
[2026-01-09 20:48:00] drwx------ 5 boinc boinc      4096 Jan  9 14:44 pilot3
[2026-01-09 20:48:00] -rw------- 1 boinc boinc 219482196 Jan  9 20:44 HITS.47898826._013082.pool.root.1
[2026-01-09 20:48:00] -rw------- 1 boinc boinc        95 Jan  9 20:44 pilot_heartbeat.json
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc       528 Jan  9 20:45 boinc_task_state.xml
[2026-01-09 20:48:00] -rw------- 1 boinc boinc      1040 Jan  9 20:45 memory_monitor_summary.json
[2026-01-09 20:48:00] -rw------- 1 boinc boinc   1516240 Jan  9 20:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:48:00] -rw------- 1 boinc boinc    508499 Jan  9 20:45 log.47898826._013082.job.log.tgz.1
[2026-01-09 20:48:00] -rw------- 1 boinc boinc      7840 Jan  9 20:45 heartbeat.json
[2026-01-09 20:48:00] -rw------- 1 boinc boinc      4834 Jan  9 20:46 pilotlog.txt
[2026-01-09 20:48:00] -rw------- 1 boinc boinc   2952198 Jan  9 20:46 log.47898826._013082.job.log.1
[2026-01-09 20:48:00] -rw------- 1 boinc boinc       357 Jan  9 20:46 output.list
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc       620 Jan  9 20:46 runtime_log
[2026-01-09 20:48:00] -rw------- 1 boinc boinc   3481600 Jan  9 20:46 result.tar.gz
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc      9206 Jan  9 20:46 runtime_log.err
[2026-01-09 20:48:00] -rw------- 1 boinc boinc       666 Jan  9 20:46 VrXMDmgnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmooiKDmz9elUo.diag
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc        26 Jan  9 20:47 wrapper_checkpoint.txt
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc      8192 Jan  9 20:48 boinc_mmap_file
[2026-01-09 20:48:00] -rw-r--r-- 1 boinc boinc     20967 Jan  9 20:48 stderr.txt
[2026-01-09 20:48:00] HITS file was successfully produced:
[2026-01-09 20:48:00] -rw------- 1 boinc boinc 219482196 Jan  9 20:44 shared/HITS.pool.root.1
[2026-01-09 20:48:00]  *** Contents of shared directory: ***
[2026-01-09 20:48:00] total 438776
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc 225719178 Jan  9 14:44 ATLAS.root_0
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc    592400 Jan  9 14:44 input.tar.gz
[2026-01-09 20:48:00] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:44 start_atlas.sh
[2026-01-09 20:48:00] -rw------- 1 boinc boinc 219482196 Jan  9 20:44 HITS.pool.root.1
[2026-01-09 20:48:00] -rw------- 1 boinc boinc   3481600 Jan  9 20:46 result.tar.gz
20:48:02 (2608098): run_atlas exited; CPU time 80025.799762
20:48:02 (2608098): called boinc_finish(0)

</stderr_txt>
]]>

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