Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:16:43 (1297016): wrapper (7.7.26015): starting
01:16:43 (1297016): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 01:16:43] Arguments: --nthreads 4
[2026-01-08 01:16:43] Threads: 4
[2026-01-08 01:16:43] Checking for CVMFS
[2026-01-08 01:16:43] No cvmfs_config command found, will try listing directly
[2026-01-08 01:16:43] CVMFS is ok
[2026-01-08 01:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 01:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 01:16:43] Further information can be found at the LHC@home message board.
[2026-01-08 01:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 01:16:43] Checking for apptainer binary...
[2026-01-08 01:16:43] which: no apptainer in ((null))
[2026-01-08 01:16:43] apptainer is not installed, using version from CVMFS
[2026-01-08 01:16:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 01:16:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-01-08 01:16:43] apptainer works
[2026-01-08 01:16:43] Set ATHENA_PROC_NUMBER=4
[2026-01-08 01:16:43] Set ATHENA_CORE_NUMBER=4
[2026-01-08 01:16:43] Starting ATLAS job with PandaID=6962318751
[2026-01-08 01:16:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 06:25:08]  *** The last 200 lines of the pilot log: ***
[2026-01-08 06:25:08] 2026-01-08 05:08:52,572 | INFO     | time since job start (17518s) is within the limit (174528.0s)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,748 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 06:25:08] 2026-01-08 05:08:52,756 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2624.30595
[2026-01-08 06:25:08] 2026-01-08 05:08:52,764 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962318751/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,765 | INFO     | extracted standard info from prmon json
[2026-01-08 06:25:08] 2026-01-08 05:08:52,765 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 06:25:08] 2026-01-08 05:08:52,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 06:25:08] 2026-01-08 05:08:52,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 06:25:08] 2026-01-08 05:08:52,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 06:25:08] 2026-01-08 05:08:52,772 | INFO     | fitting pss+swap vs Time
[2026-01-08 06:25:08] 2026-01-08 05:08:52,773 | INFO     | sum of square deviations: 7330250928.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,775 | INFO     | sum of deviations: -139226194247.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,776 | INFO     | mean x: 1767840162.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,776 | INFO     | mean y: 2412595.8362369337
[2026-01-08 06:25:08] 2026-01-08 05:08:52,776 | INFO     | intersect: 33579661207.080498
[2026-01-08 06:25:08] 2026-01-08 05:08:52,777 | INFO     | chi2: 2.6716900611343677
[2026-01-08 06:25:08] 2026-01-08 05:08:52,777 | INFO     | sum of square deviations: 6953769450.5
[2026-01-08 06:25:08] 2026-01-08 05:08:52,780 | INFO     | sum of deviations: -118573880435.49998
[2026-01-08 06:25:08] 2026-01-08 05:08:52,780 | INFO     | mean x: 1767840009.5
[2026-01-08 06:25:08] 2026-01-08 05:08:52,780 | INFO     | mean y: 2420859.9539007093
[2026-01-08 06:25:08] 2026-01-08 05:08:52,780 | INFO     | intersect: 30147172049.608852
[2026-01-08 06:25:08] 2026-01-08 05:08:52,781 | INFO     | chi2: 1.9078971078289986
[2026-01-08 06:25:08] 2026-01-08 05:08:52,781 | INFO     | current chi2=1.9078971078289986 (change=28.588381729468715 %)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,781 | INFO     | sum of square deviations: 6590404498.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,784 | INFO     | sum of deviations: -115970669720.00002
[2026-01-08 06:25:08] 2026-01-08 05:08:52,784 | INFO     | mean x: 1767839857.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,784 | INFO     | mean y: 2421952.606498195
[2026-01-08 06:25:08] 2026-01-08 05:08:52,784 | INFO     | intersect: 31110917984.40789
[2026-01-08 06:25:08] 2026-01-08 05:08:52,785 | INFO     | chi2: 1.8978656408295818
[2026-01-08 06:25:08] 2026-01-08 05:08:52,785 | INFO     | current chi2=1.8978656408295818 (change=0.5257865824238106 %)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,785 | INFO     | right removable region: 276
[2026-01-08 06:25:08] 2026-01-08 05:08:52,786 | INFO     | sum of square deviations: 6953769450.5
[2026-01-08 06:25:08] 2026-01-08 05:08:52,788 | INFO     | sum of deviations: -172405680094.49997
[2026-01-08 06:25:08] 2026-01-08 05:08:52,788 | INFO     | mean x: 1767840314.5
[2026-01-08 06:25:08] 2026-01-08 05:08:52,789 | INFO     | mean y: 2425887.734042553
[2026-01-08 06:25:08] 2026-01-08 05:08:52,789 | INFO     | intersect: 43832713027.60061
[2026-01-08 06:25:08] 2026-01-08 05:08:52,789 | INFO     | chi2: 1.3714674089238486
[2026-01-08 06:25:08] 2026-01-08 05:08:52,789 | INFO     | current chi2=1.3714674089238486 (change=48.66667249787425 %)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,790 | INFO     | sum of square deviations: 6590404498.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,792 | INFO     | sum of deviations: -161061829399.00003
[2026-01-08 06:25:08] 2026-01-08 05:08:52,793 | INFO     | mean x: 1767840467.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,793 | INFO     | mean y: 2421117.6534296027
[2026-01-08 06:25:08] 2026-01-08 05:08:52,793 | INFO     | intersect: 43206388307.68106
[2026-01-08 06:25:08] 2026-01-08 05:08:52,793 | INFO     | chi2: 1.3649787561614088
[2026-01-08 06:25:08] 2026-01-08 05:08:52,794 | INFO     | current chi2=1.3649787561614088 (change=0.4731175323758635 %)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,794 | INFO     | left removable region: 20
[2026-01-08 06:25:08] 2026-01-08 05:08:52,794 | INFO     | sum of square deviations: 5202255680.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,796 | INFO     | sum of deviations: -111569589382.0
[2026-01-08 06:25:08] 2026-01-08 05:08:52,797 | INFO     | mean x: 1767840436.5
[2026-01-08 06:25:08] 2026-01-08 05:08:52,797 | INFO     | mean y: 2419019.3125
[2026-01-08 06:25:08] 2026-01-08 05:08:52,797 | INFO     | intersect: 37916209445.16113
[2026-01-08 06:25:08] 2026-01-08 05:08:52,797 | INFO     | chi2: 0.5385783923859668
[2026-01-08 06:25:08] 2026-01-08 05:08:52,798 | INFO     | current memory leak: -21.45 B/s (using 256 data points, chi2=0.54)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,798 | INFO     | could have reported an average CPU frequency of 2611 MHz (13 samples)
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | ..............................
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . Timing measurements:
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . get job = 0 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . initial setup = 1 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . payload setup = 5 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . stage-in = 0 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . payload execution = 17483 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . stage-out = 1 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,799 | INFO     | . log creation = 0 s
[2026-01-08 06:25:08] 2026-01-08 05:08:52,800 | INFO     | ..............................
[2026-01-08 06:25:08] 2026-01-08 05:08:53,146 | INFO     | 
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | job summary report
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | --------------------------------------------------
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | PanDA job id: 6962318751
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | task id: 47898826
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | errors: (none)
[2026-01-08 06:25:08] 2026-01-08 05:08:53,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | pilot state: finished 
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | transexitcode: 0
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | exeerrorcode: 0
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | exeerrordiag: 
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | exitcode: 0
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | exitmsg: OK
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | cpuconsumptiontime: 68099 s
[2026-01-08 06:25:08] 2026-01-08 05:08:53,148 | INFO     | nevents: 400
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | neventsw: 0
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | pid: 1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | pgrp: 1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | corecount: 4
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | event service: False
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | sizes: {0: 2283809, 1: 2284008, 5: 2284270, 11: 2284326, 17492: 2316524, 17494: 2325544, 17496: 2325728, 17504: 2325922}
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | --------------------------------------------------
[2026-01-08 06:25:08] 2026-01-08 05:08:53,149 | INFO     | 
[2026-01-08 06:25:08] 2026-01-08 05:08:53,150 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-08 06:25:08] 2026-01-08 05:08:53,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 06:25:08] 2026-01-08 05:08:53,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 06:25:08] 2026-01-08 05:08:53,173 | INFO     | job 6962318751 has completed (purged errors)
[2026-01-08 06:25:08] 2026-01-08 05:08:53,173 | INFO     | overall cleanup function is called
[2026-01-08 06:25:08] 2026-01-08 05:08:54,181 | INFO     | --- collectZombieJob: --- 10, [1307481]
[2026-01-08 06:25:08] 2026-01-08 05:08:54,181 | INFO     | zombie collector waiting for pid 1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:54,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 06:25:08] 2026-01-08 05:08:54,182 | INFO     | collected zombie processes
[2026-01-08 06:25:08] 2026-01-08 05:08:54,182 | INFO     | will attempt to kill all subprocesses of pid=1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:54,513 | INFO     | process IDs to be killed: [1307481] (in reverse order)
[2026-01-08 06:25:08] 2026-01-08 05:08:54,589 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 06:25:08] 2026-01-08 05:08:54,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 06:25:08] 2026-01-08 05:08:54,597 | INFO     | did not find any defunct processes belonging to 1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:54,605 | INFO     | did not find any defunct processes belonging to 1307481
[2026-01-08 06:25:08] 2026-01-08 05:08:54,606 | INFO     | ready for new job
[2026-01-08 06:25:08] 2026-01-08 05:08:54,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 06:25:08] 2026-01-08 05:08:54,608 | INFO     | ***************************************
[2026-01-08 06:25:08] 2026-01-08 05:08:54,608 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 06:25:08] 2026-01-08 05:08:54,609 | INFO     | ***************************************
[2026-01-08 06:25:08] 2026-01-08 05:08:54,609 | INFO     | 
[2026-01-08 06:25:08] 2026-01-08 05:08:54,611 | INFO     | architecture information:
[2026-01-08 06:25:08] 2026-01-08 05:08:54,611 | INFO     | executing command: cat /etc/os-release
[2026-01-08 06:25:08] 2026-01-08 05:08:54,624 | INFO     | cat /etc/os-release:
[2026-01-08 06:25:08] NAME="CentOS Linux"
[2026-01-08 06:25:08] VERSION="7 (Core)"
[2026-01-08 06:25:08] ID="centos"
[2026-01-08 06:25:08] ID_LIKE="rhel fedora"
[2026-01-08 06:25:08] VERSION_ID="7"
[2026-01-08 06:25:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 06:25:08] ANSI_COLOR="0;31"
[2026-01-08 06:25:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 06:25:08] HOME_URL="https://www.centos.org/"
[2026-01-08 06:25:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 06:25:08] 
[2026-01-08 06:25:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 06:25:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 06:25:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 06:25:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 06:25:08] 
[2026-01-08 06:25:08] 2026-01-08 05:08:54,624 | INFO     | ***************************************
[2026-01-08 06:25:08] 2026-01-08 05:08:55,127 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-08 06:25:08] 2026-01-08 05:08:55,142 | INFO     | sufficient remaining disk space (1678943191040 B)
[2026-01-08 06:25:08] 2026-01-08 05:08:55,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 06:25:08] 2026-01-08 05:08:55,143 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 06:25:08] 2026-01-08 05:08:55,143 | INFO     | update_server=False
[2026-01-08 06:25:08] 2026-01-08 05:08:55,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 06:25:08] 2026-01-08 05:08:55,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:25:08] 2026-01-08 05:08:55,218 | INFO     | aborting loop
[2026-01-08 06:25:08] 2026-01-08 05:08:55,388 | INFO     | all data control threads have been joined
[2026-01-08 06:25:08] 2026-01-08 05:08:55,413 | INFO     | all payload control threads have been joined
[2026-01-08 06:25:08] 2026-01-08 05:08:55,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 06:25:08] 2026-01-08 05:08:55,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 06:25:08] 2026-01-08 05:08:56,012 | INFO     | all job control threads have been joined
[2026-01-08 06:25:08] 2026-01-08 05:08:56,145 | INFO     | [job] retrieve thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,157 | INFO     | [payload] failed_post thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,224 | INFO     | [job] job monitor thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,269 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,283 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,392 | INFO     | [data] control thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,417 | INFO     | [payload] control thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:56,958 | INFO     | [payload] validate_post thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,013 | INFO     | [job] control thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,185 | INFO     | [job] validate thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,452 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,457 | INFO     | [data] copytool_in thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,876 | INFO     | [data] copytool_out thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:57,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:25:08] 2026-01-08 05:08:58,927 | INFO     | [job] queue monitor thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:08:59,427 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:09:05,985 | INFO     | job.realtimelogging is not enabled
[2026-01-08 06:25:08] 2026-01-08 05:09:06,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 06:25:08] 2026-01-08 05:09:21,512 | INFO     | [monitor] cgroup control has ended
[2026-01-08 06:25:08] 2026-01-08 05:09:22,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22806571943744)>', '<ExcThread(monitor, started 22806263731968)>']
[2026-01-08 06:25:08] 2026-01-08 05:09:26,069 | INFO     | PID=1300695 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 06:25:08] 2026-01-08 05:09:26,070 | INFO     | .. there are 2 such processes running
[2026-01-08 06:25:08] 2026-01-08 05:09:26,071 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 06:25:08] 2026-01-08 05:09:26,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 06:25:08] 2026-01-08 05:09:26,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 06:25:08] 2026-01-08 05:09:26,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 06:25:08] 2026-01-08 05:09:26,071 | INFO     | [monitor] control thread has ended
[2026-01-08 06:25:08] 2026-01-08 05:09:27,526 | INFO     | all workflow threads have been joined
[2026-01-08 06:25:08] 2026-01-08 05:09:27,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 06:25:08] 2026-01-08 05:09:27,527 | INFO     | traces error code: 0
[2026-01-08 06:25:08] 2026-01-08 05:09:27,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 06:25:08] 2026-01-08 05:09:27,650 [wrapper] ==== pilot stdout END ====
[2026-01-08 06:25:08] 2026-01-08 05:09:27,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 06:25:08] 2026-01-08 05:09:27,655 [wrapper] pilotpid: 1300695
[2026-01-08 06:25:08] 2026-01-08 05:09:27,658 [wrapper] Pilot exit status: 0
[2026-01-08 06:25:08] 2026-01-08 05:09:27,668 [wrapper] pandaids: 6962318751
[2026-01-08 06:25:08] 2026-01-08 05:09:27,722 [wrapper] cleanup supervisor_pilot 1482094 1300696
[2026-01-08 06:25:08] 2026-01-08 05:09:27,725 [wrapper] Test setup, not cleaning
[2026-01-08 06:25:08] 2026-01-08 05:09:27,727 [wrapper] apfmon messages muted
[2026-01-08 06:25:08] 2026-01-08 05:09:27,730 [wrapper] ==== wrapper stdout END ====
[2026-01-08 06:25:08] 2026-01-08 05:09:27,733 [wrapper] ==== wrapper stderr END ====
[2026-01-08 06:25:08]  *** Error codes and diagnostics ***
[2026-01-08 06:25:08]     "exeErrorCode": 0,
[2026-01-08 06:25:08]     "exeErrorDiag": "",
[2026-01-08 06:25:08]     "pilotErrorCode": 0,
[2026-01-08 06:25:08]     "pilotErrorDiag": "",
[2026-01-08 06:25:08]  *** Listing of results directory ***
[2026-01-08 06:25:08] total 445032
[2026-01-08 06:25:08] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc       100 Jan  8 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 06:25:08] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 00:21 run_atlas
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc       105 Jan  8 00:21 job.xml
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc      6422 Jan  8 01:16 init_data.xml
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc 225719178 Jan  8 01:16 EVNT.47898824._000561.pool.root.1
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:16 start_atlas.sh
[2026-01-08 06:25:08] drwxrwx--x 2 boinc boinc      4096 Jan  8 01:16 shared
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc    592399 Jan  8 01:16 input.tar.gz
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc         0 Jan  8 01:16 boinc_lockfile
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc      2519 Jan  8 01:16 pandaJob.out
[2026-01-08 06:25:08] -rw------- 1 boinc boinc    989785 Jan  8 01:16 agis_schedconf.cvmfs.json
[2026-01-08 06:25:08] drwx------ 5 boinc boinc      4096 Jan  8 01:16 pilot3
[2026-01-08 06:25:08] -rw------- 1 boinc boinc 220218748 Jan  8 06:07 HITS.47898826._013080.pool.root.1
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc       529 Jan  8 06:08 boinc_task_state.xml
[2026-01-08 06:25:08] -rw------- 1 boinc boinc      1034 Jan  8 06:08 memory_monitor_summary.json
[2026-01-08 06:25:08] -rw------- 1 boinc boinc   1516240 Jan  8 06:08 agis_ddmendpoints.agis.ALL.json
[2026-01-08 06:25:08] -rw------- 1 boinc boinc    454893 Jan  8 06:08 log.47898826._013080.job.log.tgz.1
[2026-01-08 06:25:08] -rw------- 1 boinc boinc      7831 Jan  8 06:08 heartbeat.json
[2026-01-08 06:25:08] -rw------- 1 boinc boinc        95 Jan  8 06:09 pilot_heartbeat.json
[2026-01-08 06:25:08] -rw------- 1 boinc boinc      4906 Jan  8 06:09 pilotlog.txt
[2026-01-08 06:25:08] -rw------- 1 boinc boinc   2472491 Jan  8 06:09 log.47898826._013080.job.log.1
[2026-01-08 06:25:08] -rw------- 1 boinc boinc       357 Jan  8 06:09 output.list
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc       620 Jan  8 06:09 runtime_log
[2026-01-08 06:25:08] -rw------- 1 boinc boinc   2949120 Jan  8 06:09 result.tar.gz
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc      9206 Jan  8 06:09 runtime_log.err
[2026-01-08 06:25:08] -rw------- 1 boinc boinc       665 Jan  8 06:09 9vEMDmgnpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmoiKDmBAXcxm.diag
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc        26 Jan  8 06:24 wrapper_checkpoint.txt
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc      8192 Jan  8 06:25 boinc_mmap_file
[2026-01-08 06:25:08] -rw-r--r-- 1 boinc boinc     20860 Jan  8 06:25 stderr.txt
[2026-01-08 06:25:08] HITS file was successfully produced:
[2026-01-08 06:25:08] -rw------- 1 boinc boinc 220218748 Jan  8 06:07 shared/HITS.pool.root.1
[2026-01-08 06:25:08]  *** Contents of shared directory: ***
[2026-01-08 06:25:08] total 438976
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc 225719178 Jan  8 01:16 ATLAS.root_0
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:16 start_atlas.sh
[2026-01-08 06:25:08] -rw-r--r-- 2 boinc boinc    592399 Jan  8 01:16 input.tar.gz
[2026-01-08 06:25:08] -rw------- 1 boinc boinc 220218748 Jan  8 06:07 HITS.pool.root.1
[2026-01-08 06:25:08] -rw------- 1 boinc boinc   2949120 Jan  8 06:09 result.tar.gz
06:25:10 (1297016): run_atlas exited; CPU time 68775.339043
06:25:10 (1297016): called boinc_finish(0)

</stderr_txt>
]]>

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