Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:07:30 (448214): wrapper (7.7.26015): starting
01:07:30 (448214): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 01:07:30] Arguments: --nthreads 4
[2026-01-08 01:07:30] Threads: 4
[2026-01-08 01:07:30] Checking for CVMFS
[2026-01-08 01:07:30] No cvmfs_config command found, will try listing directly
[2026-01-08 01:07:30] CVMFS is ok
[2026-01-08 01:07:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 01:07:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 01:07:30] Further information can be found at the LHC@home message board.
[2026-01-08 01:07:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 01:07:30] Checking for apptainer binary...
[2026-01-08 01:07:30] which: no apptainer in ((null))
[2026-01-08 01:07:30] apptainer is not installed, using version from CVMFS
[2026-01-08 01:07:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 01:07:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-01-08 01:07:31] apptainer works
[2026-01-08 01:07:31] Set ATHENA_PROC_NUMBER=4
[2026-01-08 01:07:31] Set ATHENA_CORE_NUMBER=4
[2026-01-08 01:07:31] Starting ATLAS job with PandaID=6962319364
[2026-01-08 01:07:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:00:31 (494540): wrapper (7.7.26015): starting
02:00:31 (494540): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 02:00:31] Arguments: --nthreads 4
[2026-01-08 02:00:31] Threads: 4
[2026-01-08 02:00:31] This job has been restarted, cleaning up previous attempt
[2026-01-08 02:00:31] Checking for CVMFS
[2026-01-08 02:00:31] No cvmfs_config command found, will try listing directly
[2026-01-08 02:00:31] CVMFS is ok
[2026-01-08 02:00:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 02:00:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 02:00:31] Further information can be found at the LHC@home message board.
[2026-01-08 02:00:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 02:00:31] Checking for apptainer binary...
[2026-01-08 02:00:31] which: no apptainer in ((null))
[2026-01-08 02:00:31] apptainer is not installed, using version from CVMFS
[2026-01-08 02:00:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 02:00:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-01-08 02:00:31] apptainer works
[2026-01-08 02:00:32] Set ATHENA_PROC_NUMBER=4
[2026-01-08 02:00:32] Set ATHENA_CORE_NUMBER=4
[2026-01-08 02:00:32] Starting ATLAS job with PandaID=6962319364
[2026-01-08 02:00:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 06:38:41]  *** The last 200 lines of the pilot log: ***
[2026-01-08 06:38:41] 2026-01-08 05:26:34,681 | INFO     | intersect: -3515406452.024018
[2026-01-08 06:38:41] 2026-01-08 05:26:34,681 | INFO     | chi2: 1.3670240565053027
[2026-01-08 06:38:41] 2026-01-08 05:26:34,682 | INFO     | sum of square deviations: 5202255680.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,684 | INFO     | sum of deviations: 10704358232.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,684 | INFO     | mean x: 1767841849.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,684 | INFO     | mean y: 2350487.42578125
[2026-01-08 06:38:41] 2026-01-08 05:26:34,684 | INFO     | intersect: -3635227828.4968514
[2026-01-08 06:38:41] 2026-01-08 05:26:34,684 | INFO     | chi2: 1.3673527740255624
[2026-01-08 06:38:41] 2026-01-08 05:26:34,685 | INFO     | current chi2=1.3673527740255624 (change=-0.024046213283188334 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,685 | INFO     | right removable region: 255
[2026-01-08 06:38:41] 2026-01-08 05:26:34,685 | INFO     | sum of square deviations: 5202255680.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,687 | INFO     | sum of deviations: -15298941459.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,687 | INFO     | mean x: 1767842154.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,687 | INFO     | mean y: 2363327.2578125
[2026-01-08 06:38:41] 2026-01-08 05:26:34,687 | INFO     | intersect: 5201283813.697251
[2026-01-08 06:38:41] 2026-01-08 05:26:34,688 | INFO     | chi2: 0.16639673349041495
[2026-01-08 06:38:41] 2026-01-08 05:26:34,688 | INFO     | current chi2=0.16639673349041495 (change=87.82781234181085 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,688 | INFO     | sum of square deviations: 4903347750.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,690 | INFO     | sum of deviations: -4763253075.999999
[2026-01-08 06:38:41] 2026-01-08 05:26:34,690 | INFO     | mean x: 1767842307.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,690 | INFO     | mean y: 2357939.011952191
[2026-01-08 06:38:41] 2026-01-08 05:26:34,690 | INFO     | intersect: 1719690817.696864
[2026-01-08 06:38:41] 2026-01-08 05:26:34,691 | INFO     | chi2: 0.10566979655997664
[2026-01-08 06:38:41] 2026-01-08 05:26:34,691 | INFO     | current chi2=0.10566979655997664 (change=36.49526986293658 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,691 | INFO     | sum of square deviations: 4616114457.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,693 | INFO     | sum of deviations: 6367734977.999998
[2026-01-08 06:38:41] 2026-01-08 05:26:34,693 | INFO     | mean x: 1767842459.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,693 | INFO     | mean y: 2352056.5040650405
[2026-01-08 06:38:41] 2026-01-08 05:26:34,693 | INFO     | intersect: -2436311968.9647393
[2026-01-08 06:38:41] 2026-01-08 05:26:34,694 | INFO     | chi2: 0.0008667908432404337
[2026-01-08 06:38:41] 2026-01-08 05:26:34,694 | INFO     | current chi2=0.0008667908432404337 (change=99.17971750541939 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,694 | INFO     | sum of square deviations: 4340323240.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,696 | INFO     | sum of deviations: 5451346679.000001
[2026-01-08 06:38:41] 2026-01-08 05:26:34,696 | INFO     | mean x: 1767842612.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,696 | INFO     | mean y: 2352562.526970954
[2026-01-08 06:38:41] 2026-01-08 05:26:34,696 | INFO     | intersect: -2218017308.3402705
[2026-01-08 06:38:41] 2026-01-08 05:26:34,697 | INFO     | chi2: 0.0006488717335595994
[2026-01-08 06:38:41] 2026-01-08 05:26:34,697 | INFO     | current chi2=0.0006488717335595994 (change=25.14091044918746 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,697 | INFO     | sum of square deviations: 4075741535.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | sum of deviations: 4871033274.500001
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | mean x: 1767842764.5
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | mean y: 2352896.563559322
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | intersect: -2110445684.017574
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | chi2: 0.0006007663846773807
[2026-01-08 06:38:41] 2026-01-08 05:26:34,699 | INFO     | current chi2=0.0006007663846773807 (change=7.413691550149822 %)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,700 | INFO     | left removable region: 50
[2026-01-08 06:38:41] 2026-01-08 05:26:34,700 | INFO     | sum of square deviations: 2671343110.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,701 | INFO     | sum of deviations: 2360786925.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,701 | INFO     | mean x: 1767843344.0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,701 | INFO     | mean y: 2354378.043902439
[2026-01-08 06:38:41] 2026-01-08 05:26:34,701 | INFO     | intersect: -1559968872.885656
[2026-01-08 06:38:41] 2026-01-08 05:26:34,702 | INFO     | chi2: 0.00034477985685658696
[2026-01-08 06:38:41] 2026-01-08 05:26:34,702 | INFO     | current memory leak: 0.88 B/s (using 205 data points, chi2=0.00)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,702 | INFO     | could have reported an average CPU frequency of 2674 MHz (12 samples)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | ..............................
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . Timing measurements:
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . get job = 0 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . initial setup = 1 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . payload setup = 6 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . stage-in = 0 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . payload execution = 15913 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . stage-out = 1 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | . log creation = 0 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,703 | INFO     | ..............................
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | 
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | job summary report
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | --------------------------------------------------
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | PanDA job id: 6962319364
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | task id: 47898826
[2026-01-08 06:38:41] 2026-01-08 05:26:34,800 | INFO     | errors: (none)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 06:38:41] 2026-01-08 05:26:34,801 | INFO     | pilot state: finished 
[2026-01-08 06:38:41] 2026-01-08 05:26:34,801 | INFO     | transexitcode: 0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,801 | INFO     | exeerrorcode: 0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,801 | INFO     | exeerrordiag: 
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | exitcode: 0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | exitmsg: OK
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | cpuconsumptiontime: 61636 s
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | nevents: 400
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | neventsw: 0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,802 | INFO     | pid: 506607
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | pgrp: 506607
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | corecount: 4
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | event service: False
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | sizes: {0: 2283980, 5: 2284242, 11: 2284298, 15924: 2315537, 15926: 2324557, 15928: 2324613, 15935: 2324935}
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | --------------------------------------------------
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | 
[2026-01-08 06:38:41] 2026-01-08 05:26:34,803 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,826 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,827 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 06:38:41] 2026-01-08 05:26:34,827 | INFO     | job 6962319364 has completed (purged errors)
[2026-01-08 06:38:41] 2026-01-08 05:26:34,827 | INFO     | overall cleanup function is called
[2026-01-08 06:38:41] 2026-01-08 05:26:35,835 | INFO     | --- collectZombieJob: --- 10, [506607]
[2026-01-08 06:38:41] 2026-01-08 05:26:35,835 | INFO     | zombie collector waiting for pid 506607
[2026-01-08 06:38:41] 2026-01-08 05:26:35,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 06:38:41] 2026-01-08 05:26:35,835 | INFO     | collected zombie processes
[2026-01-08 06:38:41] 2026-01-08 05:26:35,836 | INFO     | will attempt to kill all subprocesses of pid=506607
[2026-01-08 06:38:41] 2026-01-08 05:26:36,199 | INFO     | process IDs to be killed: [506607] (in reverse order)
[2026-01-08 06:38:41] 2026-01-08 05:26:36,306 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 06:38:41] 2026-01-08 05:26:36,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 06:38:41] 2026-01-08 05:26:36,318 | INFO     | did not find any defunct processes belonging to 506607
[2026-01-08 06:38:41] 2026-01-08 05:26:36,331 | INFO     | did not find any defunct processes belonging to 506607
[2026-01-08 06:38:41] 2026-01-08 05:26:36,331 | INFO     | ready for new job
[2026-01-08 06:38:41] 2026-01-08 05:26:36,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 06:38:41] 2026-01-08 05:26:36,334 | INFO     | ***************************************
[2026-01-08 06:38:41] 2026-01-08 05:26:36,334 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 06:38:41] 2026-01-08 05:26:36,334 | INFO     | ***************************************
[2026-01-08 06:38:41] 2026-01-08 05:26:36,334 | INFO     | 
[2026-01-08 06:38:41] 2026-01-08 05:26:36,338 | INFO     | architecture information:
[2026-01-08 06:38:41] 2026-01-08 05:26:36,338 | INFO     | executing command: cat /etc/os-release
[2026-01-08 06:38:41] 2026-01-08 05:26:36,354 | INFO     | cat /etc/os-release:
[2026-01-08 06:38:41] NAME="CentOS Linux"
[2026-01-08 06:38:41] VERSION="7 (Core)"
[2026-01-08 06:38:41] ID="centos"
[2026-01-08 06:38:41] ID_LIKE="rhel fedora"
[2026-01-08 06:38:41] VERSION_ID="7"
[2026-01-08 06:38:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 06:38:41] ANSI_COLOR="0;31"
[2026-01-08 06:38:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 06:38:41] HOME_URL="https://www.centos.org/"
[2026-01-08 06:38:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 06:38:41] 
[2026-01-08 06:38:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 06:38:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 06:38:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 06:38:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 06:38:41] 
[2026-01-08 06:38:41] 2026-01-08 05:26:36,355 | INFO     | ***************************************
[2026-01-08 06:38:41] 2026-01-08 05:26:36,858 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-08 06:38:41] 2026-01-08 05:26:36,874 | INFO     | sufficient remaining disk space (684353126400 B)
[2026-01-08 06:38:41] 2026-01-08 05:26:36,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 06:38:41] 2026-01-08 05:26:36,875 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 06:38:41] 2026-01-08 05:26:36,875 | INFO     | update_server=False
[2026-01-08 06:38:41] 2026-01-08 05:26:36,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 06:38:41] 2026-01-08 05:26:36,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:38:41] 2026-01-08 05:26:36,876 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 06:38:41] 2026-01-08 05:26:36,876 | INFO     | aborting loop
[2026-01-08 06:38:41] 2026-01-08 05:26:37,130 | INFO     | all payload control threads have been joined
[2026-01-08 06:38:41] 2026-01-08 05:26:37,423 | INFO     | all data control threads have been joined
[2026-01-08 06:38:41] 2026-01-08 05:26:37,881 | INFO     | [job] job monitor thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:37,881 | INFO     | [job] retrieve thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:37,923 | INFO     | [payload] validate_post thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:37,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 06:38:41] 2026-01-08 05:26:38,030 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,126 | INFO     | all job control threads have been joined
[2026-01-08 06:38:41] 2026-01-08 05:26:38,135 | INFO     | [payload] control thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,285 | INFO     | [data] copytool_in thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,330 | INFO     | [payload] failed_post thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,429 | INFO     | [data] control thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,504 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:38,881 | INFO     | [data] copytool_out thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:39,084 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:39,131 | INFO     | [job] control thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:39,232 | INFO     | [job] validate thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:39,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:38:41] 2026-01-08 05:26:40,816 | INFO     | [job] queue monitor thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:41,959 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:26:47,114 | INFO     | job.realtimelogging is not enabled
[2026-01-08 06:38:41] 2026-01-08 05:26:48,120 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 06:38:41] 2026-01-08 05:27:07,005 | INFO     | PID=499635 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 06:38:41] 2026-01-08 05:27:07,006 | INFO     | .. there are 3 such processes running
[2026-01-08 06:38:41] 2026-01-08 05:27:07,007 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 06:38:41] 2026-01-08 05:27:07,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 06:38:41] 2026-01-08 05:27:07,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 06:38:41] 2026-01-08 05:27:08,592 | INFO     | [monitor] cgroup control has ended
[2026-01-08 06:38:41] 2026-01-08 05:27:09,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23041076516672)>', '<ExcThread(monitor, started 23040834356992)>']
[2026-01-08 06:38:41] 2026-01-08 05:27:10,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 06:38:41] 2026-01-08 05:27:10,023 | INFO     | [monitor] control thread has ended
[2026-01-08 06:38:41] 2026-01-08 05:27:14,091 | INFO     | all workflow threads have been joined
[2026-01-08 06:38:41] 2026-01-08 05:27:14,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 06:38:41] 2026-01-08 05:27:14,092 | INFO     | traces error code: 0
[2026-01-08 06:38:41] 2026-01-08 05:27:14,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 06:38:41] 2026-01-08 05:27:14,330 [wrapper] ==== pilot stdout END ====
[2026-01-08 06:38:41] 2026-01-08 05:27:14,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 06:38:41] 2026-01-08 05:27:14,336 [wrapper] pilotpid: 499635
[2026-01-08 06:38:41] 2026-01-08 05:27:14,340 [wrapper] Pilot exit status: 0
[2026-01-08 06:38:41] 2026-01-08 05:27:14,352 [wrapper] pandaids: 6962319364 6962319364
[2026-01-08 06:38:41] 2026-01-08 05:27:14,431 [wrapper] cleanup supervisor_pilot  706391 499636
[2026-01-08 06:38:41] 2026-01-08 05:27:14,435 [wrapper] Test setup, not cleaning
[2026-01-08 06:38:41] 2026-01-08 05:27:14,438 [wrapper] apfmon messages muted
[2026-01-08 06:38:41] 2026-01-08 05:27:14,442 [wrapper] ==== wrapper stdout END ====
[2026-01-08 06:38:41] 2026-01-08 05:27:14,445 [wrapper] ==== wrapper stderr END ====
[2026-01-08 06:38:41]  *** Error codes and diagnostics ***
[2026-01-08 06:38:41]     "exeErrorCode": 0,
[2026-01-08 06:38:41]     "exeErrorDiag": "",
[2026-01-08 06:38:41]     "pilotErrorCode": 0,
[2026-01-08 06:38:41]     "pilotErrorDiag": "",
[2026-01-08 06:38:41]  *** Listing of results directory ***
[2026-01-08 06:38:41] total 675032
[2026-01-08 06:38:41] drwx------ 5 boinc boinc      4096 Dec  3 15:30 pilot3
[2026-01-08 06:38:41] -rwx------ 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc       100 Jan  8 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 06:38:41] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 00:09 run_atlas
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc       105 Jan  8 00:09 job.xml
[2026-01-08 06:38:41] -rw-r--r-- 3 boinc boinc 227968392 Jan  8 01:07 EVNT.47898824._000577.pool.root.1
[2026-01-08 06:38:41] -rw-r--r-- 3 boinc boinc 227968392 Jan  8 01:07 ATLAS.root_0
[2026-01-08 06:38:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:07 start_atlas.sh
[2026-01-08 06:38:41] drwxrwx--x 2 boinc boinc      4096 Jan  8 01:07 shared
[2026-01-08 06:38:41] -rw-r--r-- 2 boinc boinc    592396 Jan  8 01:07 input.tar.gz
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 01:07 boinc_lockfile
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc      2519 Jan  8 02:00 pandaJob.out
[2026-01-08 06:38:41] -rw------- 1 boinc boinc    989777 Jan  8 02:00 agis_schedconf.cvmfs.json
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc      6643 Jan  8 05:01 init_data.xml
[2026-01-08 06:38:41] -rw------- 1 boinc boinc 226022955 Jan  8 06:25 HITS.47898826._013272.pool.root.1
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc       529 Jan  8 06:26 boinc_task_state.xml
[2026-01-08 06:38:41] -rw------- 1 boinc boinc      1034 Jan  8 06:26 memory_monitor_summary.json
[2026-01-08 06:38:41] -rw------- 1 boinc boinc   1516240 Jan  8 06:26 agis_ddmendpoints.agis.ALL.json
[2026-01-08 06:38:41] -rw------- 1 boinc boinc    423754 Jan  8 06:26 log.47898826._013272.job.log.tgz.1
[2026-01-08 06:38:41] -rw------- 1 boinc boinc      7827 Jan  8 06:26 heartbeat.json
[2026-01-08 06:38:41] -rw------- 1 boinc boinc        97 Jan  8 06:27 pilot_heartbeat.json
[2026-01-08 06:38:41] -rw------- 1 boinc boinc      4904 Jan  8 06:27 pilotlog.txt
[2026-01-08 06:38:41] -rw------- 1 boinc boinc   2249653 Jan  8 06:27 log.47898826._013272.job.log.1
[2026-01-08 06:38:41] -rw------- 1 boinc boinc       357 Jan  8 06:27 output.list
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc       620 Jan  8 06:27 runtime_log
[2026-01-08 06:38:41] -rw------- 1 boinc boinc   2693120 Jan  8 06:27 result.tar.gz
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc      9283 Jan  8 06:27 runtime_log.err
[2026-01-08 06:38:41] -rw------- 1 boinc boinc       790 Jan  8 06:27 DkYKDmsnpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYjdKDmTlgI7n.diag
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc        26 Jan  8 06:38 wrapper_checkpoint.txt
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc      8192 Jan  8 06:38 boinc_mmap_file
[2026-01-08 06:38:41] -rw-r--r-- 1 boinc boinc     22597 Jan  8 06:38 stderr.txt
[2026-01-08 06:38:41] HITS file was successfully produced:
[2026-01-08 06:38:41] -rw------- 1 boinc boinc 226022955 Jan  8 06:25 shared/HITS.pool.root.1
[2026-01-08 06:38:41]  *** Contents of shared directory: ***
[2026-01-08 06:38:41] total 446592
[2026-01-08 06:38:41] -rw-r--r-- 3 boinc boinc 227968392 Jan  8 01:07 ATLAS.root_0
[2026-01-08 06:38:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 01:07 start_atlas.sh
[2026-01-08 06:38:41] -rw-r--r-- 2 boinc boinc    592396 Jan  8 01:07 input.tar.gz
[2026-01-08 06:38:41] -rw------- 1 boinc boinc 226022955 Jan  8 06:25 HITS.pool.root.1
[2026-01-08 06:38:41] -rw------- 1 boinc boinc   2693120 Jan  8 06:27 result.tar.gz
06:38:43 (494540): run_atlas exited; CPU time 62364.624124
06:38:43 (494540): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN