Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:27:55 (19645): wrapper (7.7.26015): starting
05:27:55 (19645): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:27:55] Arguments: --nthreads 8
[2026-01-08 05:27:55] Threads: 8
[2026-01-08 05:27:55] Checking for CVMFS
[2026-01-08 05:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:27:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:27:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:27:58] 2.11.2.0 24663 33497 92992 154891 2 60 16737690 25165825 96 130560 0 15336559 99.805 11135651 2834 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 05:27:58] CVMFS is ok
[2026-01-08 05:27:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:27:58] Checking for apptainer binary...
[2026-01-08 05:27:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:27:58] Running /usr/bin/apptainer --version
[2026-01-08 05:27:58] apptainer version 1.3.2-1.el7
[2026-01-08 05:27:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:28:03] cg-vwn475.simple-grid.lan
[2026-01-08 05:28:03] apptainer works
[2026-01-08 05:28:03] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:28:03] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:28:03] Starting ATLAS job with PandaID=6962319331
[2026-01-08 05:28:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:22:20]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:22:20] 2026-01-08 10:21:42,108 | INFO     | time since job start (20971s) is within the limit (174528.0s)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,261 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 11:22:20] 2026-01-08 10:21:42,262 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 11:22:20] 2026-01-08 10:21:42,264 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6962319331/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,264 | INFO     | extracted standard info from prmon json
[2026-01-08 11:22:20] 2026-01-08 10:21:42,265 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:22:20] 2026-01-08 10:21:42,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:22:20] 2026-01-08 10:21:42,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:22:20] 2026-01-08 10:21:42,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:22:20] 2026-01-08 10:21:42,272 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:22:20] 2026-01-08 10:21:42,273 | INFO     | sum of square deviations: 11450045382.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,276 | INFO     | sum of deviations: 139892244402.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,277 | INFO     | mean x: 1767857398.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,277 | INFO     | mean y: 2450123.2012012014
[2026-01-08 11:22:20] 2026-01-08 10:21:42,277 | INFO     | intersect: -21596550661.344315
[2026-01-08 11:22:20] 2026-01-08 10:21:42,277 | INFO     | chi2: 7.127720793635341
[2026-01-08 11:22:20] 2026-01-08 10:21:42,278 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,281 | INFO     | sum of deviations: 159468227853.49997
[2026-01-08 11:22:20] 2026-01-08 10:21:42,282 | INFO     | mean x: 1767857245.5
[2026-01-08 11:22:20] 2026-01-08 10:21:42,282 | INFO     | mean y: 2455918.350609756
[2026-01-08 11:22:20] 2026-01-08 10:21:42,282 | INFO     | intersect: -25762264996.487156
[2026-01-08 11:22:20] 2026-01-08 10:21:42,282 | INFO     | chi2: 6.399650907980775
[2026-01-08 11:22:20] 2026-01-08 10:21:42,283 | INFO     | current chi2=6.399650907980775 (change=10.2146240956112 %)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,283 | INFO     | right removable region: 327
[2026-01-08 11:22:20] 2026-01-08 10:21:42,283 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,287 | INFO     | sum of deviations: 23216243790.499996
[2026-01-08 11:22:20] 2026-01-08 10:21:42,287 | INFO     | mean x: 1767857550.5
[2026-01-08 11:22:20] 2026-01-08 10:21:42,287 | INFO     | mean y: 2485127.673780488
[2026-01-08 11:22:20] 2026-01-08 10:21:42,287 | INFO     | intersect: -3748482404.870012
[2026-01-08 11:22:20] 2026-01-08 10:21:42,288 | INFO     | chi2: 2.354377611890987
[2026-01-08 11:22:20] 2026-01-08 10:21:42,288 | INFO     | current chi2=2.354377611890987 (change=66.96871720910679 %)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,288 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,292 | INFO     | sum of deviations: -34661467945.99999
[2026-01-08 11:22:20] 2026-01-08 10:21:42,292 | INFO     | mean x: 1767857703.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,292 | INFO     | mean y: 2502959.226006192
[2026-01-08 11:22:20] 2026-01-08 10:21:42,292 | INFO     | intersect: 5866752311.327245
[2026-01-08 11:22:20] 2026-01-08 10:21:42,292 | INFO     | chi2: 0.932794291772272
[2026-01-08 11:22:20] 2026-01-08 10:21:42,293 | INFO     | current chi2=0.932794291772272 (change=60.380429755145734 %)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,293 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 11:22:20] 2026-01-08 10:21:42,296 | INFO     | sum of deviations: -37078165885.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,297 | INFO     | mean x: 1767857855.5
[2026-01-08 11:22:20] 2026-01-08 10:21:42,297 | INFO     | mean y: 2503715.867924528
[2026-01-08 11:22:20] 2026-01-08 10:21:42,297 | INFO     | intersect: 6576206985.097413
[2026-01-08 11:22:20] 2026-01-08 10:21:42,297 | INFO     | chi2: 0.9164029831510622
[2026-01-08 11:22:20] 2026-01-08 10:21:42,298 | INFO     | current chi2=0.9164029831510622 (change=1.7572265145477062 %)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,298 | INFO     | left removable region: 30
[2026-01-08 11:22:20] 2026-01-08 10:21:42,298 | INFO     | sum of square deviations: 8123493708.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,301 | INFO     | sum of deviations: 16600080182.000002
[2026-01-08 11:22:20] 2026-01-08 10:21:42,301 | INFO     | mean x: 1767858130.0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,301 | INFO     | mean y: 2499165.6767676766
[2026-01-08 11:22:20] 2026-01-08 10:21:42,301 | INFO     | intersect: -3610058160.4279013
[2026-01-08 11:22:20] 2026-01-08 10:21:42,302 | INFO     | chi2: 0.0006766897577682931
[2026-01-08 11:22:20] 2026-01-08 10:21:42,302 | INFO     | current memory leak: 2.04 B/s (using 297 data points, chi2=0.00)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | ..............................
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | . Timing measurements:
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | . get job = 0 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | . initial setup = 11 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,303 | INFO     | . payload setup = 152 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,304 | INFO     | . stage-in = 0 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,304 | INFO     | . payload execution = 20479 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,304 | INFO     | . stage-out = 4 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,304 | INFO     | . log creation = 2 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,304 | INFO     | ..............................
[2026-01-08 11:22:20] 2026-01-08 10:21:42,415 | INFO     | 
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | job summary report
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | --------------------------------------------------
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | PanDA job id: 6962319331
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | task id: 47898826
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | errors: (none)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | pilot state: finished 
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | transexitcode: 0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,416 | INFO     | exeerrorcode: 0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | exeerrordiag: 
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | exitcode: 0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | exitmsg: OK
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | cpuconsumptiontime: 77034 s
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | nevents: 400
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | neventsw: 0
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | pid: 29872
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | pgrp: 29872
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | corecount: 8
[2026-01-08 11:22:20] 2026-01-08 10:21:42,417 | INFO     | event service: False
[2026-01-08 11:22:20] 2026-01-08 10:21:42,418 | INFO     | sizes: {0: 2283743, 1: 2283998, 2: 2283998, 12: 2284026, 23: 2284054, 34: 2284082, 44: 2284238, 55: 2284266, 66: 2284294, 77: 2284322, 87: 2284378, 98: 2284686, 10
[2026-01-08 11:22:20] 2026-01-08 10:21:42,418 | INFO     | --------------------------------------------------
[2026-01-08 11:22:20] 2026-01-08 10:21:42,418 | INFO     | 
[2026-01-08 11:22:20] 2026-01-08 10:21:42,418 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-08 11:22:20] 2026-01-08 10:21:42,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,617 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,617 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,617 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,619 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:22:20] 2026-01-08 10:21:42,620 | INFO     | job 6962319331 has completed (purged errors)
[2026-01-08 11:22:20] 2026-01-08 10:21:42,620 | INFO     | overall cleanup function is called
[2026-01-08 11:22:20] 2026-01-08 10:21:43,628 | INFO     | --- collectZombieJob: --- 10, [29872]
[2026-01-08 11:22:20] 2026-01-08 10:21:43,629 | INFO     | zombie collector waiting for pid 29872
[2026-01-08 11:22:20] 2026-01-08 10:21:43,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:22:20] 2026-01-08 10:21:43,629 | INFO     | collected zombie processes
[2026-01-08 11:22:20] 2026-01-08 10:21:43,629 | INFO     | will attempt to kill all subprocesses of pid=29872
[2026-01-08 11:22:20] 2026-01-08 10:21:43,703 | INFO     | process IDs to be killed: [29872] (in reverse order)
[2026-01-08 11:22:20] 2026-01-08 10:21:44,476 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:22:20] 2026-01-08 10:21:44,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:22:20] 2026-01-08 10:21:44,478 | INFO     | did not find any defunct processes belonging to 29872
[2026-01-08 11:22:20] 2026-01-08 10:21:44,480 | INFO     | did not find any defunct processes belonging to 29872
[2026-01-08 11:22:20] 2026-01-08 10:21:44,480 | INFO     | ready for new job
[2026-01-08 11:22:20] 2026-01-08 10:21:44,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:22:20] 2026-01-08 10:21:44,483 | INFO     | ***************************************
[2026-01-08 11:22:20] 2026-01-08 10:21:44,483 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:22:20] 2026-01-08 10:21:44,483 | INFO     | ***************************************
[2026-01-08 11:22:20] 2026-01-08 10:21:44,483 | INFO     | 
[2026-01-08 11:22:20] 2026-01-08 10:21:44,484 | INFO     | pilot is running in a VM
[2026-01-08 11:22:20] 2026-01-08 10:21:44,484 | INFO     | architecture information:
[2026-01-08 11:22:20] 2026-01-08 10:21:44,484 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:22:20] 2026-01-08 10:21:44,698 | INFO     | cat /etc/os-release:
[2026-01-08 11:22:20] NAME="CentOS Linux"
[2026-01-08 11:22:20] VERSION="7 (Core)"
[2026-01-08 11:22:20] ID="centos"
[2026-01-08 11:22:20] ID_LIKE="rhel fedora"
[2026-01-08 11:22:20] VERSION_ID="7"
[2026-01-08 11:22:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:22:20] ANSI_COLOR="0;31"
[2026-01-08 11:22:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:22:20] HOME_URL="https://www.centos.org/"
[2026-01-08 11:22:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:22:20] 
[2026-01-08 11:22:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:22:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:22:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:22:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:22:20] 
[2026-01-08 11:22:20] 2026-01-08 10:21:44,698 | INFO     | ***************************************
[2026-01-08 11:22:20] 2026-01-08 10:21:45,202 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-08 11:22:20] 2026-01-08 10:21:45,473 | INFO     | sufficient remaining disk space (496953720832 B)
[2026-01-08 11:22:20] 2026-01-08 10:21:45,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:22:20] 2026-01-08 10:21:45,473 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:22:20] 2026-01-08 10:21:45,474 | INFO     | update_server=False
[2026-01-08 11:22:20] 2026-01-08 10:21:45,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:22:20] 2026-01-08 10:21:45,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:22:20] 2026-01-08 10:21:45,475 | INFO     | aborting loop
[2026-01-08 11:22:20] 2026-01-08 10:21:45,882 | INFO     | all payload control threads have been joined
[2026-01-08 11:22:20] 2026-01-08 10:21:46,212 | INFO     | all data control threads have been joined
[2026-01-08 11:22:20] 2026-01-08 10:21:46,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:22:20] 2026-01-08 10:21:46,479 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:46,481 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:46,505 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:46,551 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:46,774 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:22:20] 2026-01-08 10:21:46,873 | INFO     | all job control threads have been joined
[2026-01-08 11:22:20] 2026-01-08 10:21:46,888 | INFO     | [payload] control thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:46,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:22:20] 2026-01-08 10:21:47,160 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,216 | INFO     | [job] validate thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,218 | INFO     | [data] control thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:22:20] 2026-01-08 10:21:47,868 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,869 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,879 | INFO     | [job] control thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,942 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:47,946 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:48,438 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:48,914 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:50,231 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:22:20] 2026-01-08 10:21:50,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766506420032)>', '<ExcThread(monitor, started 139766037190400)>']
[2026-01-08 11:22:20] 2026-01-08 10:21:55,403 | INFO     | all workflow threads have been joined
[2026-01-08 11:22:20] 2026-01-08 10:21:55,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:22:20] 2026-01-08 10:21:55,404 | INFO     | traces error code: 0
[2026-01-08 11:22:20] 2026-01-08 10:21:55,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:22:20] 2026-01-08 10:22:15,280 | INFO     | PID=23360 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 11:22:20] 2026-01-08 10:22:15,281 | INFO     | .. there are 2 such processes running
[2026-01-08 11:22:20] 2026-01-08 10:22:15,282 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:22:20] 2026-01-08 10:22:15,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:22:20] 2026-01-08 10:22:15,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:22:20] 2026-01-08 10:22:15,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:22:20] 2026-01-08 10:22:15,282 | INFO     | [monitor] control thread has ended
[2026-01-08 11:22:20] 2026-01-08 10:22:15,746 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:22:20] 2026-01-08 10:22:15,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:22:20] 2026-01-08 10:22:15,964 [wrapper] pilotpid: 23360
[2026-01-08 11:22:20] 2026-01-08 10:22:16,067 [wrapper] Pilot exit status: 0
[2026-01-08 11:22:20] 2026-01-08 10:22:16,567 [wrapper] pandaids: 6962319331
[2026-01-08 11:22:20] 2026-01-08 10:22:17,431 [wrapper] cleanup supervisor_pilot 29070 23361
[2026-01-08 11:22:20] 2026-01-08 10:22:17,500 [wrapper] Test setup, not cleaning
[2026-01-08 11:22:20] 2026-01-08 10:22:17,626 [wrapper] apfmon messages muted
[2026-01-08 11:22:20] 2026-01-08 10:22:17,730 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:22:20] 2026-01-08 10:22:17,818 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:22:20]  *** Error codes and diagnostics ***
[2026-01-08 11:22:20]     "exeErrorCode": 0,
[2026-01-08 11:22:20]     "exeErrorDiag": "",
[2026-01-08 11:22:20]     "pilotErrorCode": 0,
[2026-01-08 11:22:20]     "pilotErrorDiag": "",
[2026-01-08 11:22:20]  *** Listing of results directory ***
[2026-01-08 11:22:20] total 443400
[2026-01-08 11:22:20] -rwx------. 1 boinc boinc     36322 Jan  7 21:59 runpilot2-wrapper.sh
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:02 queuedata.json
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:22:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:27 run_atlas
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:27 job.xml
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc      6390 Jan  8 05:27 init_data.xml
[2026-01-08 11:22:20] -rw-r--r--. 2 boinc boinc 224266531 Jan  8 05:27 EVNT.47898824._000567.pool.root.1
[2026-01-08 11:22:20] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:27 start_atlas.sh
[2026-01-08 11:22:20] drwxrwx--x. 2 boinc boinc        68 Jan  8 05:27 shared
[2026-01-08 11:22:20] -rw-r--r--. 2 boinc boinc    592399 Jan  8 05:27 input.tar.gz
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:27 boinc_lockfile
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc      2519 Jan  8 05:28 pandaJob.out
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc    989835 Jan  8 05:32 agis_schedconf.cvmfs.json
[2026-01-08 11:22:20] drwx------. 5 boinc boinc      4096 Jan  8 05:32 pilot3
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc 219203535 Jan  8 11:18 HITS.47898826._013239.pool.root.1
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc       531 Jan  8 11:18 boinc_task_state.xml
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc      1012 Jan  8 11:19 memory_monitor_summary.json
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc   1516240 Jan  8 11:19 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc    551973 Jan  8 11:19 log.47898826._013239.job.log.tgz.1
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc      7776 Jan  8 11:21 heartbeat.json
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc      8192 Jan  8 11:22 boinc_mmap_file
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc        28 Jan  8 11:22 wrapper_checkpoint.txt
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc       820 Jan  8 11:22 pilotlog.txt
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc        95 Jan  8 11:22 pilot_heartbeat.json
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc   2786549 Jan  8 11:22 log.47898826._013239.job.log.1
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc       357 Jan  8 11:22 output.list
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc       620 Jan  8 11:22 runtime_log
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc   3358720 Jan  8 11:22 result.tar.gz
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc      8833 Jan  8 11:22 runtime_log.err
[2026-01-08 11:22:20] -rw-------. 1 boinc boinc       657 Jan  8 11:22 OODODmrnpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFjdKDmfB131n.diag
[2026-01-08 11:22:20] -rw-r--r--. 1 boinc boinc     20780 Jan  8 11:22 stderr.txt
[2026-01-08 11:22:21] HITS file was successfully produced:
[2026-01-08 11:22:21] -rw-------. 1 boinc boinc 219203535 Jan  8 11:18 shared/HITS.pool.root.1
[2026-01-08 11:22:21]  *** Contents of shared directory: ***
[2026-01-08 11:22:21] total 436956
[2026-01-08 11:22:21] -rw-r--r--. 2 boinc boinc 224266531 Jan  8 05:27 ATLAS.root_0
[2026-01-08 11:22:21] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:27 start_atlas.sh
[2026-01-08 11:22:21] -rw-r--r--. 2 boinc boinc    592399 Jan  8 05:27 input.tar.gz
[2026-01-08 11:22:21] -rw-------. 1 boinc boinc 219203535 Jan  8 11:18 HITS.pool.root.1
[2026-01-08 11:22:21] -rw-------. 1 boinc boinc   3358720 Jan  8 11:22 result.tar.gz
11:22:22 (19645): run_atlas exited; CPU time 77232.849330
11:22:22 (19645): called boinc_finish(0)

</stderr_txt>
]]>

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