Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:37:59 (7409): wrapper (7.7.26015): starting
23:37:59 (7409): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:37:59] Arguments: --nthreads 8
[2026-01-07 23:37:59] Threads: 8
[2026-01-07 23:37:59] Checking for CVMFS
[2026-01-07 23:38:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:38:04] 2.11.2.0 21950 33144 99852 154882 3 53 21604395 25165824 954 130560 0 16105928 99.835 9463765 3074 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 23:38:04] CVMFS is ok
[2026-01-07 23:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:38:04] Checking for apptainer binary...
[2026-01-07 23:38:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:38:04] Running /usr/bin/apptainer --version
[2026-01-07 23:38:04] apptainer version 1.3.2-1.el7
[2026-01-07 23:38:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:38:42] cg-vwn481.simple-grid.lan
[2026-01-07 23:38:42] apptainer works
[2026-01-07 23:38:42] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:38:42] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:38:42] Starting ATLAS job with PandaID=6962317620
[2026-01-07 23:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:37:39]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:37:39] 2026-01-08 03:36:44,934 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 04:37:39] 2026-01-08 03:36:44,936 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6962317620/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,936 | INFO     | extracted standard info from prmon json
[2026-01-08 04:37:39] 2026-01-08 03:36:44,936 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:37:39] 2026-01-08 03:36:44,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:37:39] 2026-01-08 03:36:44,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:37:39] 2026-01-08 03:36:44,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:37:39] 2026-01-08 03:36:44,942 | INFO     | fitting pss+swap vs Time
[2026-01-08 04:37:39] 2026-01-08 03:36:44,943 | INFO     | sum of square deviations: 7407141672.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,946 | INFO     | sum of deviations: 3968592259.5000076
[2026-01-08 04:37:39] 2026-01-08 03:36:44,946 | INFO     | mean x: 1767834504.5
[2026-01-08 04:37:39] 2026-01-08 03:36:44,946 | INFO     | mean y: 2494935.246527778
[2026-01-08 04:37:39] 2026-01-08 03:36:44,946 | INFO     | intersect: -944673978.3921112
[2026-01-08 04:37:39] 2026-01-08 03:36:44,947 | INFO     | chi2: 2.4095868869467334
[2026-01-08 04:37:39] 2026-01-08 03:36:44,947 | INFO     | sum of square deviations: 7028008982.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,950 | INFO     | sum of deviations: 22810087887.00001
[2026-01-08 04:37:39] 2026-01-08 03:36:44,950 | INFO     | mean x: 1767834352.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,950 | INFO     | mean y: 2502405.862190813
[2026-01-08 04:37:39] 2026-01-08 03:36:44,950 | INFO     | intersect: -5735176222.90108
[2026-01-08 04:37:39] 2026-01-08 03:36:44,951 | INFO     | chi2: 1.643109797791243
[2026-01-08 04:37:39] 2026-01-08 03:36:44,951 | INFO     | current chi2=1.643109797791243 (change=31.809481256213118 %)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,951 | INFO     | sum of square deviations: 6662039329.5
[2026-01-08 04:37:39] 2026-01-08 03:36:44,954 | INFO     | sum of deviations: 22263446940.000008
[2026-01-08 04:37:39] 2026-01-08 03:36:44,954 | INFO     | mean x: 1767834199.5
[2026-01-08 04:37:39] 2026-01-08 03:36:44,954 | INFO     | mean y: 2502178.1151079135
[2026-01-08 04:37:39] 2026-01-08 03:36:44,955 | INFO     | intersect: -5905310873.213658
[2026-01-08 04:37:39] 2026-01-08 03:36:44,955 | INFO     | chi2: 1.643621964372406
[2026-01-08 04:37:39] 2026-01-08 03:36:44,955 | INFO     | current chi2=1.643621964372406 (change=-0.031170563394571298 %)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,955 | INFO     | right removable region: 277
[2026-01-08 04:37:39] 2026-01-08 03:36:44,956 | INFO     | sum of square deviations: 7028008982.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,958 | INFO     | sum of deviations: -40126709388.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,959 | INFO     | mean x: 1767834657.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,959 | INFO     | mean y: 2512525.222614841
[2026-01-08 04:37:39] 2026-01-08 03:36:44,959 | INFO     | intersect: 10096037975.90959
[2026-01-08 04:37:39] 2026-01-08 03:36:44,959 | INFO     | chi2: 0.9213274500625641
[2026-01-08 04:37:39] 2026-01-08 03:36:44,959 | INFO     | current chi2=0.9213274500625641 (change=61.764090971211736 %)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,960 | INFO     | sum of square deviations: 6662039329.5
[2026-01-08 04:37:39] 2026-01-08 03:36:44,962 | INFO     | sum of deviations: -36565039984.999985
[2026-01-08 04:37:39] 2026-01-08 03:36:44,962 | INFO     | mean x: 1767834809.5
[2026-01-08 04:37:39] 2026-01-08 03:36:44,962 | INFO     | mean y: 2511017.3884892086
[2026-01-08 04:37:39] 2026-01-08 03:36:44,962 | INFO     | intersect: 9705388364.570671
[2026-01-08 04:37:39] 2026-01-08 03:36:44,963 | INFO     | chi2: 0.9033122146111908
[2026-01-08 04:37:39] 2026-01-08 03:36:44,963 | INFO     | current chi2=0.9033122146111908 (change=1.9553564207980496 %)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,963 | INFO     | left removable region: 20
[2026-01-08 04:37:39] 2026-01-08 03:36:44,963 | INFO     | sum of square deviations: 5263458688.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,965 | INFO     | sum of deviations: 2054281505.9999986
[2026-01-08 04:37:39] 2026-01-08 03:36:44,966 | INFO     | mean x: 1767834779.0
[2026-01-08 04:37:39] 2026-01-08 03:36:44,966 | INFO     | mean y: 2509804.906614786
[2026-01-08 04:37:39] 2026-01-08 03:36:44,966 | INFO     | intersect: -687460518.3036611
[2026-01-08 04:37:39] 2026-01-08 03:36:44,966 | INFO     | chi2: 0.03545862473684083
[2026-01-08 04:37:39] 2026-01-08 03:36:44,966 | INFO     | current memory leak: 0.39 B/s (using 257 data points, chi2=0.04)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,967 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-08 04:37:39] 2026-01-08 03:36:44,967 | INFO     | ..............................
[2026-01-08 04:37:39] 2026-01-08 03:36:44,967 | INFO     | . Timing measurements:
[2026-01-08 04:37:39] 2026-01-08 03:36:44,967 | INFO     | . get job = 0 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . initial setup = 2 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . payload setup = 6 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . stage-in = 0 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . payload execution = 17545 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . stage-out = 4 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,968 | INFO     | . log creation = 1 s
[2026-01-08 04:37:39] 2026-01-08 03:36:44,969 | INFO     | ..............................
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | 
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | job summary report
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | --------------------------------------------------
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | PanDA job id: 6962317620
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | task id: 47898826
[2026-01-08 04:37:39] 2026-01-08 03:36:45,076 | INFO     | errors: (none)
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | pilot state: finished 
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | transexitcode: 0
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | exeerrorcode: 0
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | exeerrordiag: 
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | exitcode: 0
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | exitmsg: OK
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | cpuconsumptiontime: 74068 s
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | nevents: 400
[2026-01-08 04:37:39] 2026-01-08 03:36:45,077 | INFO     | neventsw: 0
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | pid: 17890
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | pgrp: 17890
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | corecount: 8
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | event service: False
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | sizes: {0: 2283969, 1: 2283997, 5: 2284259, 11: 2284315, 17556: 2315642, 17561: 2324826, 17671: 2324964}
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | --------------------------------------------------
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | 
[2026-01-08 04:37:39] 2026-01-08 03:36:45,078 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-08 04:37:39] 2026-01-08 03:36:45,087 | INFO     | time since job start (17687s) is within the limit (174528.0s)
[2026-01-08 04:37:39] 2026-01-08 03:36:45,699 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,699 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,699 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:37:39] 2026-01-08 03:36:45,701 | INFO     | job 6962317620 has completed (purged errors)
[2026-01-08 04:37:39] 2026-01-08 03:36:45,702 | INFO     | overall cleanup function is called
[2026-01-08 04:37:39] 2026-01-08 03:36:46,711 | INFO     | --- collectZombieJob: --- 10, [17890]
[2026-01-08 04:37:39] 2026-01-08 03:36:46,711 | INFO     | zombie collector waiting for pid 17890
[2026-01-08 04:37:39] 2026-01-08 03:36:46,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:37:39] 2026-01-08 03:36:46,711 | INFO     | collected zombie processes
[2026-01-08 04:37:39] 2026-01-08 03:36:46,711 | INFO     | will attempt to kill all subprocesses of pid=17890
[2026-01-08 04:37:39] 2026-01-08 03:36:46,778 | INFO     | process IDs to be killed: [17890] (in reverse order)
[2026-01-08 04:37:39] 2026-01-08 03:36:47,602 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:37:39] 2026-01-08 03:36:47,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:37:39] 2026-01-08 03:36:47,605 | INFO     | did not find any defunct processes belonging to 17890
[2026-01-08 04:37:39] 2026-01-08 03:36:47,606 | INFO     | did not find any defunct processes belonging to 17890
[2026-01-08 04:37:39] 2026-01-08 03:36:47,606 | INFO     | ready for new job
[2026-01-08 04:37:39] 2026-01-08 03:36:47,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:37:39] 2026-01-08 03:36:47,609 | INFO     | ***************************************
[2026-01-08 04:37:39] 2026-01-08 03:36:47,609 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:37:39] 2026-01-08 03:36:47,609 | INFO     | ***************************************
[2026-01-08 04:37:39] 2026-01-08 03:36:47,609 | INFO     | 
[2026-01-08 04:37:39] 2026-01-08 03:36:47,610 | INFO     | pilot is running in a VM
[2026-01-08 04:37:39] 2026-01-08 03:36:47,610 | INFO     | architecture information:
[2026-01-08 04:37:39] 2026-01-08 03:36:47,628 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:37:39] 2026-01-08 03:36:47,904 | INFO     | cat /etc/os-release:
[2026-01-08 04:37:39] NAME="CentOS Linux"
[2026-01-08 04:37:39] VERSION="7 (Core)"
[2026-01-08 04:37:39] ID="centos"
[2026-01-08 04:37:39] ID_LIKE="rhel fedora"
[2026-01-08 04:37:39] VERSION_ID="7"
[2026-01-08 04:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:37:39] ANSI_COLOR="0;31"
[2026-01-08 04:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:37:39] HOME_URL="https://www.centos.org/"
[2026-01-08 04:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:37:39] 
[2026-01-08 04:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:37:39] 
[2026-01-08 04:37:39] 2026-01-08 03:36:47,904 | INFO     | ***************************************
[2026-01-08 04:37:39] 2026-01-08 03:36:48,408 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-08 04:37:39] 2026-01-08 03:36:48,604 | INFO     | sufficient remaining disk space (497756930048 B)
[2026-01-08 04:37:39] 2026-01-08 03:36:48,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:37:39] 2026-01-08 03:36:48,605 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:37:39] 2026-01-08 03:36:48,605 | INFO     | update_server=False
[2026-01-08 04:37:39] 2026-01-08 03:36:48,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:37:39] 2026-01-08 03:36:48,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:37:39] 2026-01-08 03:36:49,210 | INFO     | all data control threads have been joined
[2026-01-08 04:37:39] 2026-01-08 03:36:49,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:37:39] 2026-01-08 03:36:49,256 | INFO     | aborting loop
[2026-01-08 04:37:39] 2026-01-08 03:36:49,422 | INFO     | all payload control threads have been joined
[2026-01-08 04:37:39] 2026-01-08 03:36:49,434 | INFO     | all job control threads have been joined
[2026-01-08 04:37:39] 2026-01-08 03:36:49,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:37:39] 2026-01-08 03:36:49,611 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:49,788 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:49,832 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:37:39] 2026-01-08 03:36:50,216 | INFO     | [data] control thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,262 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,428 | INFO     | [payload] control thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,440 | INFO     | [job] control thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,621 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,661 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,673 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,815 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,928 | INFO     | [job] validate thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:50,929 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:51,100 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:53,608 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:36:58,985 | INFO     | job.realtimelogging is not enabled
[2026-01-08 04:37:39] 2026-01-08 03:36:59,991 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:37:39] 2026-01-08 03:37:18,221 | INFO     | PID=11458 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 04:37:39] 2026-01-08 03:37:18,221 | INFO     | .. there are 2 such processes running
[2026-01-08 04:37:39] 2026-01-08 03:37:18,222 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:37:39] 2026-01-08 03:37:18,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:37:39] 2026-01-08 03:37:18,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:37:39] 2026-01-08 03:37:28,312 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:37:39] 2026-01-08 03:37:29,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718742767424)>', '<ExcThread(monitor, started 140718077105920)>']
[2026-01-08 04:37:39] 2026-01-08 03:37:30,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:37:39] 2026-01-08 03:37:30,294 | INFO     | [monitor] control thread has ended
[2026-01-08 04:37:39] 2026-01-08 03:37:34,602 | INFO     | all workflow threads have been joined
[2026-01-08 04:37:39] 2026-01-08 03:37:34,602 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:37:39] 2026-01-08 03:37:34,602 | INFO     | traces error code: 0
[2026-01-08 04:37:39] 2026-01-08 03:37:34,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:37:39] 2026-01-08 03:37:35,018 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:37:39] 2026-01-08 03:37:35,083 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:37:39] 2026-01-08 03:37:35,194 [wrapper] pilotpid: 11458
[2026-01-08 04:37:39] 2026-01-08 03:37:35,283 [wrapper] Pilot exit status: 0
[2026-01-08 04:37:39] 2026-01-08 03:37:35,844 [wrapper] pandaids: 6962317620
[2026-01-08 04:37:39] 2026-01-08 03:37:36,459 [wrapper] cleanup supervisor_pilot 23252 11459
[2026-01-08 04:37:39] 2026-01-08 03:37:36,518 [wrapper] Test setup, not cleaning
[2026-01-08 04:37:39] 2026-01-08 03:37:36,616 [wrapper] apfmon messages muted
[2026-01-08 04:37:39] 2026-01-08 03:37:36,728 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:37:39] 2026-01-08 03:37:36,804 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:37:39]  *** Error codes and diagnostics ***
[2026-01-08 04:37:39]     "exeErrorCode": 0,
[2026-01-08 04:37:39]     "exeErrorDiag": "",
[2026-01-08 04:37:39]     "pilotErrorCode": 0,
[2026-01-08 04:37:39]     "pilotErrorDiag": "",
[2026-01-08 04:37:39]  *** Listing of results directory ***
[2026-01-08 04:37:39] total 447492
[2026-01-08 04:37:39] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc       100 Jan  7 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:37:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 23:37 run_atlas
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc       105 Jan  7 23:37 job.xml
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc      6391 Jan  7 23:37 init_data.xml
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc 224444882 Jan  7 23:37 EVNT.47898824._000548.pool.root.1
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:37 start_atlas.sh
[2026-01-08 04:37:39] drwxrwx--x. 2 boinc boinc        68 Jan  7 23:37 shared
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc    592397 Jan  7 23:37 input.tar.gz
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc         0 Jan  7 23:37 boinc_lockfile
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc      2518 Jan  7 23:38 pandaJob.out
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc    989785 Jan  7 23:41 agis_schedconf.cvmfs.json
[2026-01-08 04:37:39] drwx------. 5 boinc boinc      4096 Jan  7 23:41 pilot3
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc 224147648 Jan  8 04:33 HITS.47898826._012854.pool.root.1
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc       531 Jan  8 04:33 boinc_task_state.xml
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc      1033 Jan  8 04:34 memory_monitor_summary.json
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc   1516240 Jan  8 04:34 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc    499385 Jan  8 04:34 log.47898826._012854.job.log.tgz.1
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc        95 Jan  8 04:36 pilot_heartbeat.json
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc      7775 Jan  8 04:36 heartbeat.json
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc      8192 Jan  8 04:37 boinc_mmap_file
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc        28 Jan  8 04:37 wrapper_checkpoint.txt
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc      4957 Jan  8 04:37 pilotlog.txt
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc   2373864 Jan  8 04:37 log.47898826._012854.job.log.1
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc       357 Jan  8 04:37 output.list
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc       620 Jan  8 04:37 runtime_log
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc   2887680 Jan  8 04:37 result.tar.gz
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc      8833 Jan  8 04:37 runtime_log.err
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc       657 Jan  8 04:37 mkFMDmOlpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAniKDm1yNOqm.diag
[2026-01-08 04:37:39] -rw-r--r--. 1 boinc boinc     20718 Jan  8 04:37 stderr.txt
[2026-01-08 04:37:39] HITS file was successfully produced:
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc 224147648 Jan  8 04:33 shared/HITS.pool.root.1
[2026-01-08 04:37:39]  *** Contents of shared directory: ***
[2026-01-08 04:37:39] total 441500
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc 224444882 Jan  7 23:37 ATLAS.root_0
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:37 start_atlas.sh
[2026-01-08 04:37:39] -rw-r--r--. 2 boinc boinc    592397 Jan  7 23:37 input.tar.gz
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc 224147648 Jan  8 04:33 HITS.pool.root.1
[2026-01-08 04:37:39] -rw-------. 1 boinc boinc   2887680 Jan  8 04:37 result.tar.gz
04:37:40 (7409): run_atlas exited; CPU time 74219.413029
04:37:40 (7409): called boinc_finish(0)

</stderr_txt>
]]>

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