Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:43 (25680): wrapper (7.7.26015): starting
04:37:43 (25680): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 04:37:43] Arguments: --nthreads 8
[2026-01-08 04:37:43] Threads: 8
[2026-01-08 04:37:43] Checking for CVMFS
[2026-01-08 04:37:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 04:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 04:37:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 04:37:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 04:37:46] 2.11.2.0 21950 33443 101040 154889 0 60 22233293 25165825 96 130560 0 16230300 99.830 9483365 3047 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 04:37:46] CVMFS is ok
[2026-01-08 04:37:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:37:46] Checking for apptainer binary...
[2026-01-08 04:37:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 04:37:46] Running /usr/bin/apptainer --version
[2026-01-08 04:37:47] apptainer version 1.3.2-1.el7
[2026-01-08 04:37:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:38:03] cg-vwn481.simple-grid.lan
[2026-01-08 04:38:03] apptainer works
[2026-01-08 04:38:03] Set ATHENA_PROC_NUMBER=8
[2026-01-08 04:38:03] Set ATHENA_CORE_NUMBER=8
[2026-01-08 04:38:03] Starting ATLAS job with PandaID=6962317619
[2026-01-08 04:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 10:23:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 10:23:07] 2026-01-08 09:22:06,104 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 10:23:07] 2026-01-08 09:22:06,106 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6962317619/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,106 | INFO     | extracted standard info from prmon json
[2026-01-08 10:23:07] 2026-01-08 09:22:06,107 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 10:23:07] 2026-01-08 09:22:06,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 10:23:07] 2026-01-08 09:22:06,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 10:23:07] 2026-01-08 09:22:06,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 10:23:07] 2026-01-08 09:22:06,122 | INFO     | fitting pss+swap vs Time
[2026-01-08 10:23:07] 2026-01-08 09:22:06,123 | INFO     | sum of square deviations: 10546523325.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,127 | INFO     | sum of deviations: 178027773917.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,127 | INFO     | mean x: 1767854139.5
[2026-01-08 10:23:07] 2026-01-08 09:22:06,127 | INFO     | mean y: 2430219.8086419753
[2026-01-08 10:23:07] 2026-01-08 09:22:06,127 | INFO     | intersect: -29839360042.873833
[2026-01-08 10:23:07] 2026-01-08 09:22:06,128 | INFO     | chi2: 9.090043060749618
[2026-01-08 10:23:07] 2026-01-08 09:22:06,128 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,132 | INFO     | sum of deviations: 218149219493.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,132 | INFO     | mean x: 1767853987.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,132 | INFO     | mean y: 2442818.510971787
[2026-01-08 10:23:07] 2026-01-08 09:22:06,132 | INFO     | intersect: -38311235665.93846
[2026-01-08 10:23:07] 2026-01-08 09:22:06,133 | INFO     | chi2: 7.620505473114793
[2026-01-08 10:23:07] 2026-01-08 09:22:06,133 | INFO     | current chi2=7.620505473114793 (change=16.16645353397961 %)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,133 | INFO     | right removable region: 318
[2026-01-08 10:23:07] 2026-01-08 09:22:06,134 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,137 | INFO     | sum of deviations: 65573603953.99997
[2026-01-08 10:23:07] 2026-01-08 09:22:06,138 | INFO     | mean x: 1767854292.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,138 | INFO     | mean y: 2465872.5078369905
[2026-01-08 10:23:07] 2026-01-08 09:22:06,138 | INFO     | intersect: -11514267573.738312
[2026-01-08 10:23:07] 2026-01-08 09:22:06,138 | INFO     | chi2: 4.272690389340911
[2026-01-08 10:23:07] 2026-01-08 09:22:06,147 | INFO     | current chi2=4.272690389340911 (change=52.99592795340884 %)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,147 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 10:23:07] 2026-01-08 09:22:06,151 | INFO     | sum of deviations: -18821884859.500004
[2026-01-08 10:23:07] 2026-01-08 09:22:06,151 | INFO     | mean x: 1767854444.5
[2026-01-08 10:23:07] 2026-01-08 09:22:06,151 | INFO     | mean y: 2493465.4044585987
[2026-01-08 10:23:07] 2026-01-08 09:22:06,151 | INFO     | intersect: 3468637882.619921
[2026-01-08 10:23:07] 2026-01-08 09:22:06,152 | INFO     | chi2: 1.716326939258775
[2026-01-08 10:23:07] 2026-01-08 09:22:06,152 | INFO     | current chi2=1.716326939258775 (change=59.83029934627374 %)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,152 | INFO     | sum of square deviations: 9148487810.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,155 | INFO     | sum of deviations: -29767480036.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,156 | INFO     | mean x: 1767854597.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,156 | INFO     | mean y: 2497140.4045307445
[2026-01-08 10:23:07] 2026-01-08 09:22:06,156 | INFO     | intersect: 5754767626.596316
[2026-01-08 10:23:07] 2026-01-08 09:22:06,156 | INFO     | chi2: 1.651083614157416
[2026-01-08 10:23:07] 2026-01-08 09:22:06,157 | INFO     | current chi2=1.651083614157416 (change=3.8013343267533606 %)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,157 | INFO     | left removable region: 30
[2026-01-08 10:23:07] 2026-01-08 09:22:06,157 | INFO     | sum of square deviations: 7407141672.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,160 | INFO     | sum of deviations: 19267582305.0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,160 | INFO     | mean x: 1767854871.5
[2026-01-08 10:23:07] 2026-01-08 09:22:06,160 | INFO     | mean y: 2508660.722222222
[2026-01-08 10:23:07] 2026-01-08 09:22:06,160 | INFO     | intersect: -4596065357.199093
[2026-01-08 10:23:07] 2026-01-08 09:22:06,161 | INFO     | chi2: 0.0026522546459126564
[2026-01-08 10:23:07] 2026-01-08 09:22:06,161 | INFO     | current memory leak: 2.60 B/s (using 288 data points, chi2=0.00)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,171 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,171 | INFO     | ..............................
[2026-01-08 10:23:07] 2026-01-08 09:22:06,171 | INFO     | . Timing measurements:
[2026-01-08 10:23:07] 2026-01-08 09:22:06,171 | INFO     | . get job = 0 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . initial setup = 12 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . payload setup = 151 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . stage-in = 0 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . payload execution = 19873 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . stage-out = 6 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | . log creation = 1 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,172 | INFO     | ..............................
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | 
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | job summary report
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | --------------------------------------------------
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | PanDA job id: 6962317619
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | task id: 47898826
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | errors: (none)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,539 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | pilot state: finished 
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | transexitcode: 0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | exeerrorcode: 0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | exeerrordiag: 
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | exitcode: 0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | exitmsg: OK
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | cpuconsumptiontime: 73895 s
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | nevents: 400
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | neventsw: 0
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | pid: 3511
[2026-01-08 10:23:07] 2026-01-08 09:22:06,540 | INFO     | pgrp: 3511
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | corecount: 8
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | event service: False
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 55: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 98: 2284713, 10
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | --------------------------------------------------
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | 
[2026-01-08 10:23:07] 2026-01-08 09:22:06,541 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-08 10:23:07] 2026-01-08 09:22:06,965 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,967 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 10:23:07] 2026-01-08 09:22:06,968 | INFO     | job 6962317619 has completed (purged errors)
[2026-01-08 10:23:07] 2026-01-08 09:22:06,968 | INFO     | overall cleanup function is called
[2026-01-08 10:23:07] 2026-01-08 09:22:07,977 | INFO     | --- collectZombieJob: --- 10, [3511]
[2026-01-08 10:23:07] 2026-01-08 09:22:07,977 | INFO     | zombie collector waiting for pid 3511
[2026-01-08 10:23:07] 2026-01-08 09:22:07,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 10:23:07] 2026-01-08 09:22:07,977 | INFO     | collected zombie processes
[2026-01-08 10:23:07] 2026-01-08 09:22:07,977 | INFO     | will attempt to kill all subprocesses of pid=3511
[2026-01-08 10:23:07] 2026-01-08 09:22:08,057 | INFO     | process IDs to be killed: [3511] (in reverse order)
[2026-01-08 10:23:07] 2026-01-08 09:22:09,016 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 10:23:07] 2026-01-08 09:22:09,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 10:23:07] 2026-01-08 09:22:09,018 | INFO     | did not find any defunct processes belonging to 3511
[2026-01-08 10:23:07] 2026-01-08 09:22:09,020 | INFO     | did not find any defunct processes belonging to 3511
[2026-01-08 10:23:07] 2026-01-08 09:22:09,021 | INFO     | ready for new job
[2026-01-08 10:23:07] 2026-01-08 09:22:09,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 10:23:07] 2026-01-08 09:22:09,023 | INFO     | ***************************************
[2026-01-08 10:23:07] 2026-01-08 09:22:09,024 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 10:23:07] 2026-01-08 09:22:09,024 | INFO     | ***************************************
[2026-01-08 10:23:07] 2026-01-08 09:22:09,024 | INFO     | 
[2026-01-08 10:23:07] 2026-01-08 09:22:09,024 | INFO     | pilot is running in a VM
[2026-01-08 10:23:07] 2026-01-08 09:22:09,025 | INFO     | architecture information:
[2026-01-08 10:23:07] 2026-01-08 09:22:09,032 | INFO     | executing command: cat /etc/os-release
[2026-01-08 10:23:07] 2026-01-08 09:22:09,198 | INFO     | cat /etc/os-release:
[2026-01-08 10:23:07] NAME="CentOS Linux"
[2026-01-08 10:23:07] VERSION="7 (Core)"
[2026-01-08 10:23:07] ID="centos"
[2026-01-08 10:23:07] ID_LIKE="rhel fedora"
[2026-01-08 10:23:07] VERSION_ID="7"
[2026-01-08 10:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 10:23:07] ANSI_COLOR="0;31"
[2026-01-08 10:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 10:23:07] HOME_URL="https://www.centos.org/"
[2026-01-08 10:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 10:23:07] 
[2026-01-08 10:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 10:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 10:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 10:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 10:23:07] 
[2026-01-08 10:23:07] 2026-01-08 09:22:09,198 | INFO     | ***************************************
[2026-01-08 10:23:07] 2026-01-08 09:22:09,702 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-08 10:23:07] 2026-01-08 09:22:09,977 | INFO     | sufficient remaining disk space (497473814528 B)
[2026-01-08 10:23:07] 2026-01-08 09:22:09,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 10:23:07] 2026-01-08 09:22:09,978 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 10:23:07] 2026-01-08 09:22:09,978 | INFO     | update_server=False
[2026-01-08 10:23:07] 2026-01-08 09:22:09,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 10:23:07] 2026-01-08 09:22:09,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 10:23:07] 2026-01-08 09:22:10,059 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 10:23:07] 2026-01-08 09:22:10,059 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 10:23:07] 2026-01-08 09:22:10,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:23:07] 2026-01-08 09:22:10,059 | INFO     | will abort loop
[2026-01-08 10:23:07] 2026-01-08 09:22:10,759 | INFO     | all job control threads have been joined
[2026-01-08 10:23:07] 2026-01-08 09:22:10,845 | INFO     | all data control threads have been joined
[2026-01-08 10:23:07] 2026-01-08 09:22:10,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 10:23:07] 2026-01-08 09:22:10,984 | INFO     | [job] retrieve thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,026 | INFO     | [payload] failed_post thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,065 | INFO     | [job] job monitor thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:23:07] 2026-01-08 09:22:11,330 | INFO     | all payload control threads have been joined
[2026-01-08 10:23:07] 2026-01-08 09:22:11,547 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,624 | INFO     | [payload] validate_post thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,692 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,765 | INFO     | [job] control thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,851 | INFO     | [data] control thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,865 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,964 | INFO     | [job] validate thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:11,986 | INFO     | [data] copytool_out thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:12,004 | INFO     | [data] copytool_in thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:12,220 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:12,333 | INFO     | [job] queue monitor thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:12,337 | INFO     | [payload] control thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:14,918 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 10:23:07] 2026-01-08 09:22:38,780 | INFO     | PID=29398 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 10:23:07] 2026-01-08 09:22:38,781 | INFO     | .. there are 2 such processes running
[2026-01-08 10:23:07] 2026-01-08 09:22:38,781 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 10:23:07] 2026-01-08 09:22:38,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 10:23:07] 2026-01-08 09:22:38,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 10:23:07] 2026-01-08 09:22:55,228 | INFO     | [monitor] cgroup control has ended
[2026-01-08 10:23:07] 2026-01-08 09:22:56,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126672021312)>', '<ExcThread(monitor, started 140125841381120)>']
[2026-01-08 10:23:07] 2026-01-08 09:22:56,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 10:23:07] 2026-01-08 09:22:56,888 | INFO     | [monitor] control thread has ended
[2026-01-08 10:23:07] 2026-01-08 09:23:01,260 | INFO     | all workflow threads have been joined
[2026-01-08 10:23:07] 2026-01-08 09:23:01,260 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 10:23:07] 2026-01-08 09:23:01,260 | INFO     | traces error code: 0
[2026-01-08 10:23:07] 2026-01-08 09:23:01,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 10:23:07] 2026-01-08 09:23:01,636 [wrapper] ==== pilot stdout END ====
[2026-01-08 10:23:07] 2026-01-08 09:23:01,762 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 10:23:07] 2026-01-08 09:23:01,864 [wrapper] pilotpid: 29398
[2026-01-08 10:23:07] 2026-01-08 09:23:01,990 [wrapper] Pilot exit status: 0
[2026-01-08 10:23:07] 2026-01-08 09:23:02,527 [wrapper] pandaids: 6962317619
[2026-01-08 10:23:07] 2026-01-08 09:23:03,581 [wrapper] cleanup supervisor_pilot  1247 29399
[2026-01-08 10:23:07] 2026-01-08 09:23:03,651 [wrapper] Test setup, not cleaning
[2026-01-08 10:23:07] 2026-01-08 09:23:03,756 [wrapper] apfmon messages muted
[2026-01-08 10:23:07] 2026-01-08 09:23:03,855 [wrapper] ==== wrapper stdout END ====
[2026-01-08 10:23:07] 2026-01-08 09:23:03,959 [wrapper] ==== wrapper stderr END ====
[2026-01-08 10:23:07]  *** Error codes and diagnostics ***
[2026-01-08 10:23:07]     "exeErrorCode": 0,
[2026-01-08 10:23:07]     "exeErrorDiag": "",
[2026-01-08 10:23:07]     "pilotErrorCode": 0,
[2026-01-08 10:23:07]     "pilotErrorDiag": "",
[2026-01-08 10:23:07]  *** Listing of results directory ***
[2026-01-08 10:23:07] total 445848
[2026-01-08 10:23:07] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc       100 Jan  8 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 10:23:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 04:37 run_atlas
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc       105 Jan  8 04:37 job.xml
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc      6391 Jan  8 04:37 init_data.xml
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc 224444882 Jan  8 04:37 EVNT.47898824._000548.pool.root.1
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:37 start_atlas.sh
[2026-01-08 10:23:07] drwxrwx--x. 2 boinc boinc        68 Jan  8 04:37 shared
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc    592393 Jan  8 04:37 input.tar.gz
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc         0 Jan  8 04:37 boinc_lockfile
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc      2518 Jan  8 04:38 pandaJob.out
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc    989835 Jan  8 04:42 agis_schedconf.cvmfs.json
[2026-01-08 10:23:07] drwx------. 5 boinc boinc      4096 Jan  8 04:42 pilot3
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc 221694499 Jan  8 10:18 HITS.47898826._012853.pool.root.1
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc       531 Jan  8 10:18 boinc_task_state.xml
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc      1015 Jan  8 10:19 memory_monitor_summary.json
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc   1516240 Jan  8 10:20 agis_ddmendpoints.agis.ALL.json
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc    535462 Jan  8 10:20 log.47898826._012853.job.log.tgz.1
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc        95 Jan  8 10:21 pilot_heartbeat.json
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc      7781 Jan  8 10:22 heartbeat.json
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc      8192 Jan  8 10:22 boinc_mmap_file
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc        28 Jan  8 10:22 wrapper_checkpoint.txt
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc      5071 Jan  8 10:23 pilotlog.txt
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc   2719736 Jan  8 10:23 log.47898826._012853.job.log.1
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc       357 Jan  8 10:23 output.list
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc       620 Jan  8 10:23 runtime_log
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc   3276800 Jan  8 10:23 result.tar.gz
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc      8833 Jan  8 10:23 runtime_log.err
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc       657 Jan  8 10:23 cqDMDmOlpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9miKDm5MXRWo.diag
[2026-01-08 10:23:07] -rw-r--r--. 1 boinc boinc     20775 Jan  8 10:23 stderr.txt
[2026-01-08 10:23:07] HITS file was successfully produced:
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc 221694499 Jan  8 10:18 shared/HITS.pool.root.1
[2026-01-08 10:23:07]  *** Contents of shared directory: ***
[2026-01-08 10:23:07] total 439484
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc 224444882 Jan  8 04:37 ATLAS.root_0
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:37 start_atlas.sh
[2026-01-08 10:23:07] -rw-r--r--. 2 boinc boinc    592393 Jan  8 04:37 input.tar.gz
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc 221694499 Jan  8 10:18 HITS.pool.root.1
[2026-01-08 10:23:07] -rw-------. 1 boinc boinc   3276800 Jan  8 10:23 result.tar.gz
10:23:08 (25680): run_atlas exited; CPU time 74086.916303
10:23:08 (25680): called boinc_finish(0)

</stderr_txt>
]]>

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