Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:32:00 (1977374): wrapper (7.7.26015): starting
00:32:00 (1977374): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 00:32:00] Arguments: --nthreads 4
[2026-01-08 00:32:00] Threads: 4
[2026-01-08 00:32:00] Checking for CVMFS
[2026-01-08 00:32:00] No cvmfs_config command found, will try listing directly
[2026-01-08 00:32:01] CVMFS is ok
[2026-01-08 00:32:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:32:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:32:01] Further information can be found at the LHC@home message board.
[2026-01-08 00:32:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:32:01] Checking for apptainer binary...
[2026-01-08 00:32:01] which: no apptainer in ((null))
[2026-01-08 00:32:01] apptainer is not installed, using version from CVMFS
[2026-01-08 00:32:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:32:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-01-08 00:32:02] apptainer works
[2026-01-08 00:32:02] Set ATHENA_PROC_NUMBER=4
[2026-01-08 00:32:02] Set ATHENA_CORE_NUMBER=4
[2026-01-08 00:32:02] Starting ATLAS job with PandaID=6962317563
[2026-01-08 00:32:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:02:02]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:02:02] 2026-01-08 03:45:37,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,478 | INFO     | time since job start (15201s) is within the limit (174528.0s)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,510 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 05:02:02] 2026-01-08 03:45:39,521 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2761.994265625
[2026-01-08 05:02:02] 2026-01-08 03:45:39,534 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6962317563/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,535 | INFO     | extracted standard info from prmon json
[2026-01-08 05:02:02] 2026-01-08 03:45:39,535 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:02:02] 2026-01-08 03:45:39,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:02:02] 2026-01-08 03:45:39,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:02:02] 2026-01-08 03:45:39,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:02:02] 2026-01-08 03:45:39,540 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:02:02] 2026-01-08 03:45:39,541 | INFO     | sum of square deviations: 4787066500.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,543 | INFO     | sum of deviations: -81823338993.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,543 | INFO     | mean x: 1767836332.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,543 | INFO     | mean y: 2396759.18875502
[2026-01-08 05:02:02] 2026-01-08 03:45:39,543 | INFO     | intersect: 30219288769.646034
[2026-01-08 05:02:02] 2026-01-08 03:45:39,544 | INFO     | chi2: 2.5103663624920665
[2026-01-08 05:02:02] 2026-01-08 03:45:39,544 | INFO     | sum of square deviations: 4504437945.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,546 | INFO     | sum of deviations: -65575808707.5
[2026-01-08 05:02:02] 2026-01-08 03:45:39,546 | INFO     | mean x: 1767836179.5
[2026-01-08 05:02:02] 2026-01-08 03:45:39,546 | INFO     | mean y: 2405399.75
[2026-01-08 05:02:02] 2026-01-08 03:45:39,546 | INFO     | intersect: 25738643427.353603
[2026-01-08 05:02:02] 2026-01-08 03:45:39,546 | INFO     | chi2: 1.8514928075543544
[2026-01-08 05:02:02] 2026-01-08 03:45:39,547 | INFO     | current chi2=1.8514928075543544 (change=26.246111515119313 %)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,547 | INFO     | sum of square deviations: 4233158440.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | sum of deviations: -63964294146.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | mean x: 1767836027.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | mean y: 2406305.7866108785
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | intersect: 26714939095.58788
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | chi2: 1.8445285693117344
[2026-01-08 05:02:02] 2026-01-08 03:45:39,549 | INFO     | current chi2=1.8445285693117344 (change=0.3761417929470189 %)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,550 | INFO     | right removable region: 238
[2026-01-08 05:02:02] 2026-01-08 03:45:39,550 | INFO     | sum of square deviations: 4504437945.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,552 | INFO     | sum of deviations: -109248104878.99998
[2026-01-08 05:02:02] 2026-01-08 03:45:39,552 | INFO     | mean x: 1767836484.5
[2026-01-08 05:02:02] 2026-01-08 03:45:39,552 | INFO     | mean y: 2411353.655737705
[2026-01-08 05:02:02] 2026-01-08 03:45:39,552 | INFO     | intersect: 42878523318.292564
[2026-01-08 05:02:02] 2026-01-08 03:45:39,552 | INFO     | chi2: 1.2213507403861343
[2026-01-08 05:02:02] 2026-01-08 03:45:39,553 | INFO     | current chi2=1.2213507403861343 (change=51.34770929715267 %)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,553 | INFO     | sum of square deviations: 4233158440.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | sum of deviations: -99094123568.99997
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | mean x: 1767836637.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | mean y: 2405630.2259414224
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | intersect: 41385742597.09916
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | chi2: 1.2084689645439368
[2026-01-08 05:02:02] 2026-01-08 03:45:39,555 | INFO     | current chi2=1.2084689645439368 (change=1.0547155224325568 %)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,556 | INFO     | left removable region: 20
[2026-01-08 05:02:02] 2026-01-08 03:45:39,556 | INFO     | sum of square deviations: 3212467674.5
[2026-01-08 05:02:02] 2026-01-08 03:45:39,557 | INFO     | sum of deviations: -56980845542.0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,558 | INFO     | mean x: 1767836606.5
[2026-01-08 05:02:02] 2026-01-08 03:45:39,558 | INFO     | mean y: 2400428.366972477
[2026-01-08 05:02:02] 2026-01-08 03:45:39,558 | INFO     | intersect: 31359237235.806087
[2026-01-08 05:02:02] 2026-01-08 03:45:39,559 | INFO     | chi2: 0.4549460847724248
[2026-01-08 05:02:02] 2026-01-08 03:45:39,559 | INFO     | current memory leak: -17.74 B/s (using 218 data points, chi2=0.45)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | could have reported an average CPU frequency of 2634 MHz (12 samples)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | ..............................
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . Timing measurements:
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . get job = 0 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . initial setup = 1 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . payload setup = 8 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . stage-in = 0 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . payload execution = 15161 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,560 | INFO     | . stage-out = 1 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,561 | INFO     | . log creation = 0 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,561 | INFO     | ..............................
[2026-01-08 05:02:02] 2026-01-08 03:45:39,669 | INFO     | 
[2026-01-08 05:02:02] 2026-01-08 03:45:39,669 | INFO     | job summary report
[2026-01-08 05:02:02] 2026-01-08 03:45:39,669 | INFO     | --------------------------------------------------
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | PanDA job id: 6962317563
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | task id: 47898826
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | errors: (none)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | pilot state: finished 
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | transexitcode: 0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | exeerrorcode: 0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | exeerrordiag: 
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | exitcode: 0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | exitmsg: OK
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | cpuconsumptiontime: 58800 s
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | nevents: 400
[2026-01-08 05:02:02] 2026-01-08 03:45:39,670 | INFO     | neventsw: 0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | pid: 1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | pgrp: 1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | corecount: 4
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | event service: False
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | sizes: {0: 2283979, 1: 2283979, 5: 2284269, 11: 2284325, 15173: 2315285, 15175: 2324489, 15185: 2324627}
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | --------------------------------------------------
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | 
[2026-01-08 05:02:02] 2026-01-08 03:45:39,671 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-08 05:02:02] 2026-01-08 03:45:39,693 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | job 6962317563 has completed (purged errors)
[2026-01-08 05:02:02] 2026-01-08 03:45:39,695 | INFO     | overall cleanup function is called
[2026-01-08 05:02:02] 2026-01-08 03:45:40,703 | INFO     | --- collectZombieJob: --- 10, [1988682]
[2026-01-08 05:02:02] 2026-01-08 03:45:40,703 | INFO     | zombie collector waiting for pid 1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:40,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:02:02] 2026-01-08 03:45:40,704 | INFO     | collected zombie processes
[2026-01-08 05:02:02] 2026-01-08 03:45:40,704 | INFO     | will attempt to kill all subprocesses of pid=1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:41,082 | INFO     | process IDs to be killed: [1988682] (in reverse order)
[2026-01-08 05:02:02] 2026-01-08 03:45:41,202 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:02:02] 2026-01-08 03:45:41,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:02:02] 2026-01-08 03:45:41,216 | INFO     | did not find any defunct processes belonging to 1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:41,230 | INFO     | did not find any defunct processes belonging to 1988682
[2026-01-08 05:02:02] 2026-01-08 03:45:41,230 | INFO     | ready for new job
[2026-01-08 05:02:02] 2026-01-08 03:45:41,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:02:02] 2026-01-08 03:45:41,234 | INFO     | ***************************************
[2026-01-08 05:02:02] 2026-01-08 03:45:41,234 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:02:02] 2026-01-08 03:45:41,234 | INFO     | ***************************************
[2026-01-08 05:02:02] 2026-01-08 03:45:41,234 | INFO     | 
[2026-01-08 05:02:02] 2026-01-08 03:45:41,239 | INFO     | architecture information:
[2026-01-08 05:02:02] 2026-01-08 03:45:41,239 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:02:02] 2026-01-08 03:45:41,257 | INFO     | cat /etc/os-release:
[2026-01-08 05:02:02] NAME="CentOS Linux"
[2026-01-08 05:02:02] VERSION="7 (Core)"
[2026-01-08 05:02:02] ID="centos"
[2026-01-08 05:02:02] ID_LIKE="rhel fedora"
[2026-01-08 05:02:02] VERSION_ID="7"
[2026-01-08 05:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:02:02] ANSI_COLOR="0;31"
[2026-01-08 05:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:02:02] HOME_URL="https://www.centos.org/"
[2026-01-08 05:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:02:02] 
[2026-01-08 05:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:02:02] 
[2026-01-08 05:02:02] 2026-01-08 03:45:41,257 | INFO     | ***************************************
[2026-01-08 05:02:02] 2026-01-08 03:45:41,760 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-08 05:02:02] 2026-01-08 03:45:41,779 | INFO     | sufficient remaining disk space (682587324416 B)
[2026-01-08 05:02:02] 2026-01-08 03:45:41,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:02:02] 2026-01-08 03:45:41,780 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:02:02] 2026-01-08 03:45:41,780 | INFO     | update_server=False
[2026-01-08 05:02:02] 2026-01-08 03:45:41,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:02:02] 2026-01-08 03:45:41,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:02:02] 2026-01-08 03:45:41,780 | INFO     | aborting loop
[2026-01-08 05:02:02] 2026-01-08 03:45:41,873 | INFO     | all job control threads have been joined
[2026-01-08 05:02:02] 2026-01-08 03:45:42,205 | INFO     | all data control threads have been joined
[2026-01-08 05:02:02] 2026-01-08 03:45:42,273 | INFO     | all payload control threads have been joined
[2026-01-08 05:02:02] 2026-01-08 03:45:42,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:02:02] 2026-01-08 03:45:42,785 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:42,786 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:42,832 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:42,879 | INFO     | [job] control thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,210 | INFO     | [data] control thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,244 | INFO     | [job] validate thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,279 | INFO     | [payload] control thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,354 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,806 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:43,879 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:44,037 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:44,274 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:44,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:02:02] 2026-01-08 03:45:44,689 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:44,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:02:02] 2026-01-08 03:45:45,686 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:45:48,780 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:02:02] 2026-01-08 03:46:13,036 | INFO     | PID=1981611 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 05:02:02] 2026-01-08 03:46:13,037 | INFO     | .. there are 2 such processes running
[2026-01-08 05:02:02] 2026-01-08 03:46:13,037 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:02:02] 2026-01-08 03:46:13,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:02:02] 2026-01-08 03:46:13,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:02:02] 2026-01-08 03:46:40,659 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:02:02] 2026-01-08 03:46:41,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22594970818368)>', '<ExcThread(monitor, started 22594732390144)>']
[2026-01-08 05:02:02] 2026-01-08 03:46:42,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:02:02] 2026-01-08 03:46:42,154 | INFO     | [monitor] control thread has ended
[2026-01-08 05:02:02] 2026-01-08 03:46:46,805 | INFO     | all workflow threads have been joined
[2026-01-08 05:02:02] 2026-01-08 03:46:46,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:02:02] 2026-01-08 03:46:46,806 | INFO     | traces error code: 0
[2026-01-08 05:02:02] 2026-01-08 03:46:46,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:02:02] 2026-01-08 03:46:46,991 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:02:02] 2026-01-08 03:46:46,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:02:02] 2026-01-08 03:46:46,997 [wrapper] pilotpid: 1981611
[2026-01-08 05:02:02] 2026-01-08 03:46:47,000 [wrapper] Pilot exit status: 0
[2026-01-08 05:02:02] 2026-01-08 03:46:47,016 [wrapper] pandaids: 6962317563
[2026-01-08 05:02:02] 2026-01-08 03:46:47,093 [wrapper] cleanup supervisor_pilot 2136442 1981612
[2026-01-08 05:02:02] 2026-01-08 03:46:47,096 [wrapper] Test setup, not cleaning
[2026-01-08 05:02:02] 2026-01-08 03:46:47,099 [wrapper] apfmon messages muted
[2026-01-08 05:02:02] 2026-01-08 03:46:47,102 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:02:02] 2026-01-08 03:46:47,105 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:02:02]  *** Error codes and diagnostics ***
[2026-01-08 05:02:02]     "exeErrorCode": 0,
[2026-01-08 05:02:02]     "exeErrorDiag": "",
[2026-01-08 05:02:02]     "pilotErrorCode": 0,
[2026-01-08 05:02:02]     "pilotErrorDiag": "",
[2026-01-08 05:02:02]  *** Listing of results directory ***
[2026-01-08 05:02:02] total 449540
[2026-01-08 05:02:02] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc       100 Jan  7 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:02:02] -rwxr-xr-x 1 boinc boinc      7986 Jan  7 23:34 run_atlas
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc       105 Jan  7 23:34 job.xml
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc 227780662 Jan  8 00:32 EVNT.47898824._000546.pool.root.1
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc      6638 Jan  8 00:32 init_data.xml
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc    592398 Jan  8 00:32 input.tar.gz
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:32 start_atlas.sh
[2026-01-08 05:02:02] drwxrwx--x 2 boinc boinc      4096 Jan  8 00:32 shared
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc         0 Jan  8 00:32 boinc_lockfile
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc      2518 Jan  8 00:32 pandaJob.out
[2026-01-08 05:02:02] -rw------- 1 boinc boinc    989785 Jan  8 00:32 agis_schedconf.cvmfs.json
[2026-01-08 05:02:02] drwx------ 5 boinc boinc      4096 Jan  8 00:32 pilot3
[2026-01-08 05:02:02] -rw------- 1 boinc boinc 223564329 Jan  8 04:44 HITS.47898826._012797.pool.root.1
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc       529 Jan  8 04:44 boinc_task_state.xml
[2026-01-08 05:02:02] -rw------- 1 boinc boinc      1034 Jan  8 04:45 memory_monitor_summary.json
[2026-01-08 05:02:02] -rw------- 1 boinc boinc   1516240 Jan  8 04:45 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:02:02] -rw------- 1 boinc boinc    410101 Jan  8 04:45 log.47898826._012797.job.log.tgz.1
[2026-01-08 05:02:02] -rw------- 1 boinc boinc      7831 Jan  8 04:45 heartbeat.json
[2026-01-08 05:02:02] -rw------- 1 boinc boinc        95 Jan  8 04:46 pilot_heartbeat.json
[2026-01-08 05:02:02] -rw------- 1 boinc boinc      4833 Jan  8 04:46 pilotlog.txt
[2026-01-08 05:02:02] -rw------- 1 boinc boinc   2124368 Jan  8 04:46 log.47898826._012797.job.log.1
[2026-01-08 05:02:02] -rw------- 1 boinc boinc       357 Jan  8 04:46 output.list
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc       620 Jan  8 04:46 runtime_log
[2026-01-08 05:02:02] -rw------- 1 boinc boinc   2549760 Jan  8 04:46 result.tar.gz
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc      9206 Jan  8 04:46 runtime_log.err
[2026-01-08 05:02:02] -rw------- 1 boinc boinc       666 Jan  8 04:46 MhBLDmOlpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJmiKDm9v0kRn.diag
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc        26 Jan  8 05:02 wrapper_checkpoint.txt
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc      8192 Jan  8 05:02 boinc_mmap_file
[2026-01-08 05:02:02] -rw-r--r-- 1 boinc boinc     20877 Jan  8 05:02 stderr.txt
[2026-01-08 05:02:02] HITS file was successfully produced:
[2026-01-08 05:02:02] -rw------- 1 boinc boinc 223564329 Jan  8 04:44 shared/HITS.pool.root.1
[2026-01-08 05:02:02]  *** Contents of shared directory: ***
[2026-01-08 05:02:02] total 443868
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc 227780662 Jan  8 00:32 ATLAS.root_0
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc    592398 Jan  8 00:32 input.tar.gz
[2026-01-08 05:02:02] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:32 start_atlas.sh
[2026-01-08 05:02:02] -rw------- 1 boinc boinc 223564329 Jan  8 04:44 HITS.pool.root.1
[2026-01-08 05:02:02] -rw------- 1 boinc boinc   2549760 Jan  8 04:46 result.tar.gz
05:02:04 (1977374): run_atlas exited; CPU time 59485.989113
05:02:04 (1977374): called boinc_finish(0)

</stderr_txt>
]]>

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