Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:57 (3580129): wrapper (7.7.26015): starting
04:55:57 (3580129): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 04:55:57] Arguments: --nthreads 4
[2026-01-11 04:55:57] Threads: 4
[2026-01-11 04:55:57] Checking for CVMFS
[2026-01-11 04:55:57] No cvmfs_config command found, will try listing directly
[2026-01-11 04:55:57] CVMFS is ok
[2026-01-11 04:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 04:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 04:55:57] Further information can be found at the LHC@home message board.
[2026-01-11 04:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:55:57] Checking for apptainer binary...
[2026-01-11 04:55:57] which: no apptainer in ((null))
[2026-01-11 04:55:57] apptainer is not installed, using version from CVMFS
[2026-01-11 04:55:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:55:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-11 04:55:57] apptainer works
[2026-01-11 04:55:57] Set ATHENA_PROC_NUMBER=4
[2026-01-11 04:55:57] Set ATHENA_CORE_NUMBER=4
[2026-01-11 04:55:57] Starting ATLAS job with PandaID=6962317610
[2026-01-11 04:55:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 10:04:45]  *** The last 200 lines of the pilot log: ***
[2026-01-11 10:04:45] 2026-01-11 09:03:38,777 | INFO     | total number of processed events: 400 (read)
[2026-01-11 10:04:45] 2026-01-11 09:03:38,778 | INFO     | executing command: lscpu
[2026-01-11 10:04:45] 2026-01-11 09:03:38,817 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 10:04:45] 2026-01-11 09:03:39,443 | INFO     | time since job start (18450s) is within the limit (174528.0s)
[2026-01-11 10:04:45] 2026-01-11 09:03:39,663 | INFO     | monitor loop #1343: job 0:6962317610 is in state 'finished'
[2026-01-11 10:04:45] 2026-01-11 09:03:39,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:04:45] 2026-01-11 09:03:41,449 | INFO     | time since job start (18452s) is within the limit (174528.0s)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,166 | INFO     | monitor loop #1344: job 0:6962317610 is in state 'finished'
[2026-01-11 10:04:45] 2026-01-11 09:03:42,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,512 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 10:04:45] 2026-01-11 09:03:42,520 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2424.4598999999994
[2026-01-11 10:04:45] 2026-01-11 09:03:42,528 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962317610/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,529 | INFO     | extracted standard info from prmon json
[2026-01-11 10:04:45] 2026-01-11 09:03:42,529 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 10:04:45] 2026-01-11 09:03:42,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 10:04:45] 2026-01-11 09:03:42,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 10:04:45] 2026-01-11 09:03:42,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 10:04:45] 2026-01-11 09:03:42,536 | INFO     | fitting pss+swap vs Time
[2026-01-11 10:04:45] 2026-01-11 09:03:42,537 | INFO     | sum of square deviations: 8540720135.5
[2026-01-11 10:04:45] 2026-01-11 09:03:42,540 | INFO     | sum of deviations: 33120565947.499992
[2026-01-11 10:04:45] 2026-01-11 09:03:42,540 | INFO     | mean x: 1768112975.5
[2026-01-11 10:04:45] 2026-01-11 09:03:42,540 | INFO     | mean y: 2342583.155629139
[2026-01-11 10:04:45] 2026-01-11 09:03:42,540 | INFO     | intersect: -6854327753.607472
[2026-01-11 10:04:45] 2026-01-11 09:03:42,541 | INFO     | chi2: 1.3037867472027371
[2026-01-11 10:04:45] 2026-01-11 09:03:42,541 | INFO     | sum of square deviations: 8123493708.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,544 | INFO     | sum of deviations: 32301463041.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,544 | INFO     | mean x: 1768112823.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,544 | INFO     | mean y: 2342283.7407407407
[2026-01-11 10:04:45] 2026-01-11 09:03:42,544 | INFO     | intersect: -7028208001.318048
[2026-01-11 10:04:45] 2026-01-11 09:03:42,545 | INFO     | chi2: 1.3041491744201497
[2026-01-11 10:04:45] 2026-01-11 09:03:42,545 | INFO     | current chi2=1.3041491744201497 (change=-0.027798044288309825 %)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,545 | INFO     | right removable region: 296
[2026-01-11 10:04:45] 2026-01-11 09:03:42,546 | INFO     | sum of square deviations: 8123493708.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,548 | INFO     | sum of deviations: -47164529.000001006
[2026-01-11 10:04:45] 2026-01-11 09:03:42,548 | INFO     | mean x: 1768113128.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,549 | INFO     | mean y: 2354575.7744107745
[2026-01-11 10:04:45] 2026-01-11 09:03:42,549 | INFO     | intersect: 12620137.107795449
[2026-01-11 10:04:45] 2026-01-11 09:03:42,549 | INFO     | chi2: 0.05788038540633885
[2026-01-11 10:04:45] 2026-01-11 09:03:42,549 | INFO     | current chi2=0.05788038540633885 (change=95.56059412856277 %)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,550 | INFO     | sum of square deviations: 7720081493.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,553 | INFO     | sum of deviations: 2536117242.4999995
[2026-01-11 10:04:45] 2026-01-11 09:03:42,553 | INFO     | mean x: 1768113280.5
[2026-01-11 10:04:45] 2026-01-11 09:03:42,553 | INFO     | mean y: 2353590.154109589
[2026-01-11 10:04:45] 2026-01-11 09:03:42,553 | INFO     | intersect: -578487762.5486017
[2026-01-11 10:04:45] 2026-01-11 09:03:42,554 | INFO     | chi2: 0.05137725626358476
[2026-01-11 10:04:45] 2026-01-11 09:03:42,554 | INFO     | current chi2=0.05137725626358476 (change=11.235462751500425 %)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,554 | INFO     | left removable region: 20
[2026-01-11 10:04:45] 2026-01-11 09:03:42,554 | INFO     | sum of square deviations: 6519285025.0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,557 | INFO     | sum of deviations: 14432467751.999996
[2026-01-11 10:04:45] 2026-01-11 09:03:42,557 | INFO     | mean x: 1768113402.5
[2026-01-11 10:04:45] 2026-01-11 09:03:42,557 | INFO     | mean y: 2348376.565217391
[2026-01-11 10:04:45] 2026-01-11 09:03:42,557 | INFO     | intersect: -3911921296.505295
[2026-01-11 10:04:45] 2026-01-11 09:03:42,558 | INFO     | chi2: 0.0023104290428959235
[2026-01-11 10:04:45] 2026-01-11 09:03:42,558 | INFO     | current memory leak: 2.21 B/s (using 276 data points, chi2=0.00)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,558 | INFO     | could have reported an average CPU frequency of 2454 MHz (14 samples)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | ..............................
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . Timing measurements:
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . get job = 0 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . initial setup = 1 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . payload setup = 6 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . stage-in = 0 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,559 | INFO     | . payload execution = 18421 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,560 | INFO     | . stage-out = 1 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,560 | INFO     | . log creation = 0 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,560 | INFO     | ..............................
[2026-01-11 10:04:45] 2026-01-11 09:03:42,666 | INFO     | 
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | job summary report
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | --------------------------------------------------
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | PanDA job id: 6962317610
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | task id: 47898826
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | errors: (none)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 10:04:45] 2026-01-11 09:03:42,667 | INFO     | pilot state: finished 
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | transexitcode: 0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | exeerrorcode: 0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | exeerrordiag: 
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | exitcode: 0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | exitmsg: OK
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | cpuconsumptiontime: 71308 s
[2026-01-11 10:04:45] 2026-01-11 09:03:42,668 | INFO     | nevents: 400
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | neventsw: 0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | pid: 3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | pgrp: 3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | corecount: 4
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | event service: False
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | sizes: {0: 2283808, 1: 2284007, 5: 2284269, 12: 2284325, 18430: 2316855, 18433: 2326059, 18438: 2326197}
[2026-01-11 10:04:45] 2026-01-11 09:03:42,669 | INFO     | --------------------------------------------------
[2026-01-11 10:04:45] 2026-01-11 09:03:42,670 | INFO     | 
[2026-01-11 10:04:45] 2026-01-11 09:03:42,670 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-01-11 10:04:45] 2026-01-11 09:03:42,689 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,690 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,690 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,690 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 10:04:45] 2026-01-11 09:03:42,693 | INFO     | job 6962317610 has completed (purged errors)
[2026-01-11 10:04:45] 2026-01-11 09:03:42,693 | INFO     | overall cleanup function is called
[2026-01-11 10:04:45] 2026-01-11 09:03:43,696 | INFO     | --- collectZombieJob: --- 10, [3590569]
[2026-01-11 10:04:45] 2026-01-11 09:03:43,697 | INFO     | zombie collector waiting for pid 3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:43,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 10:04:45] 2026-01-11 09:03:43,697 | INFO     | collected zombie processes
[2026-01-11 10:04:45] 2026-01-11 09:03:43,697 | INFO     | will attempt to kill all subprocesses of pid=3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:44,049 | INFO     | process IDs to be killed: [3590569] (in reverse order)
[2026-01-11 10:04:45] 2026-01-11 09:03:44,131 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 10:04:45] 2026-01-11 09:03:44,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 10:04:45] 2026-01-11 09:03:44,140 | INFO     | did not find any defunct processes belonging to 3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:44,147 | INFO     | did not find any defunct processes belonging to 3590569
[2026-01-11 10:04:45] 2026-01-11 09:03:44,148 | INFO     | ready for new job
[2026-01-11 10:04:45] 2026-01-11 09:03:44,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 10:04:45] 2026-01-11 09:03:44,150 | INFO     | ***************************************
[2026-01-11 10:04:45] 2026-01-11 09:03:44,150 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 10:04:45] 2026-01-11 09:03:44,150 | INFO     | ***************************************
[2026-01-11 10:04:45] 2026-01-11 09:03:44,151 | INFO     | 
[2026-01-11 10:04:45] 2026-01-11 09:03:44,153 | INFO     | architecture information:
[2026-01-11 10:04:45] 2026-01-11 09:03:44,153 | INFO     | executing command: cat /etc/os-release
[2026-01-11 10:04:45] 2026-01-11 09:03:44,167 | INFO     | cat /etc/os-release:
[2026-01-11 10:04:45] NAME="CentOS Linux"
[2026-01-11 10:04:45] VERSION="7 (Core)"
[2026-01-11 10:04:45] ID="centos"
[2026-01-11 10:04:45] ID_LIKE="rhel fedora"
[2026-01-11 10:04:45] VERSION_ID="7"
[2026-01-11 10:04:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 10:04:45] ANSI_COLOR="0;31"
[2026-01-11 10:04:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 10:04:45] HOME_URL="https://www.centos.org/"
[2026-01-11 10:04:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 10:04:45] 
[2026-01-11 10:04:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 10:04:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 10:04:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 10:04:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 10:04:45] 
[2026-01-11 10:04:45] 2026-01-11 09:03:44,167 | INFO     | ***************************************
[2026-01-11 10:04:45] 2026-01-11 09:03:44,671 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-01-11 10:04:45] 2026-01-11 09:03:44,685 | INFO     | sufficient remaining disk space (1680681730048 B)
[2026-01-11 10:04:45] 2026-01-11 09:03:44,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 10:04:45] 2026-01-11 09:03:44,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 10:04:45] 2026-01-11 09:03:44,685 | INFO     | update_server=False
[2026-01-11 10:04:45] 2026-01-11 09:03:44,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 10:04:45] 2026-01-11 09:03:44,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 10:04:45] 2026-01-11 09:03:45,136 | INFO     | all payload control threads have been joined
[2026-01-11 10:04:45] 2026-01-11 09:03:45,444 | INFO     | all data control threads have been joined
[2026-01-11 10:04:45] 2026-01-11 09:03:45,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:04:45] 2026-01-11 09:03:45,676 | INFO     | aborting loop
[2026-01-11 10:04:45] 2026-01-11 09:03:45,691 | INFO     | [job] retrieve thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:45,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 10:04:45] 2026-01-11 09:03:46,091 | INFO     | [payload] validate_post thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,096 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,140 | INFO     | [payload] control thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,163 | INFO     | [job] validate thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,188 | INFO     | all job control threads have been joined
[2026-01-11 10:04:45] 2026-01-11 09:03:46,297 | INFO     | [payload] failed_post thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,321 | INFO     | [data] copytool_in thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,450 | INFO     | [data] control thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,485 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,621 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,682 | INFO     | [job] job monitor thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:46,890 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:47,193 | INFO     | [job] control thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:47,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:04:45] 2026-01-11 09:03:47,865 | INFO     | [data] copytool_out thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:48,681 | INFO     | [job] queue monitor thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:03:48,691 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 10:04:45] 2026-01-11 09:04:14,982 | INFO     | PID=3583835 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 10:04:45] 2026-01-11 09:04:14,982 | INFO     | .. there are 3 such processes running
[2026-01-11 10:04:45] 2026-01-11 09:04:14,983 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 10:04:45] 2026-01-11 09:04:14,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 10:04:45] 2026-01-11 09:04:14,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 10:04:45] 2026-01-11 09:04:38,354 | INFO     | [monitor] cgroup control has ended
[2026-01-11 10:04:45] 2026-01-11 09:04:40,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22672392501056)>', '<ExcThread(monitor, started 22672157153024)>']
[2026-01-11 10:04:45] 2026-01-11 09:04:41,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 10:04:45] 2026-01-11 09:04:41,109 | INFO     | [monitor] control thread has ended
[2026-01-11 10:04:45] 2026-01-11 09:04:45,135 | INFO     | all workflow threads have been joined
[2026-01-11 10:04:45] 2026-01-11 09:04:45,136 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 10:04:45] 2026-01-11 09:04:45,136 | INFO     | traces error code: 0
[2026-01-11 10:04:45] 2026-01-11 09:04:45,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 10:04:45] 2026-01-11 09:04:45,270 [wrapper] ==== pilot stdout END ====
[2026-01-11 10:04:45] 2026-01-11 09:04:45,273 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 10:04:45] 2026-01-11 09:04:45,276 [wrapper] pilotpid: 3583835
[2026-01-11 10:04:45] 2026-01-11 09:04:45,278 [wrapper] Pilot exit status: 0
[2026-01-11 10:04:45] 2026-01-11 09:04:45,288 [wrapper] pandaids: 6962317610
[2026-01-11 10:04:45] 2026-01-11 09:04:45,349 [wrapper] cleanup supervisor_pilot 3826940 3583836
[2026-01-11 10:04:45] 2026-01-11 09:04:45,351 [wrapper] Test setup, not cleaning
[2026-01-11 10:04:45] 2026-01-11 09:04:45,354 [wrapper] apfmon messages muted
[2026-01-11 10:04:45] 2026-01-11 09:04:45,357 [wrapper] ==== wrapper stdout END ====
[2026-01-11 10:04:45] 2026-01-11 09:04:45,359 [wrapper] ==== wrapper stderr END ====
[2026-01-11 10:04:45]  *** Error codes and diagnostics ***
[2026-01-11 10:04:45]     "exeErrorCode": 0,
[2026-01-11 10:04:45]     "exeErrorDiag": "",
[2026-01-11 10:04:45]     "pilotErrorCode": 0,
[2026-01-11 10:04:45]     "pilotErrorDiag": "",
[2026-01-11 10:04:45]  *** Listing of results directory ***
[2026-01-11 10:04:45] total 444588
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc    597923 Jan  7 14:01 pilot3.tar.gz
[2026-01-11 10:04:45] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc       100 Jan 11 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 10:04:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 04:55 run_atlas
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc       105 Jan 11 04:55 job.xml
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc 224444882 Jan 11 04:55 EVNT.47898824._000548.pool.root.1
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc      6424 Jan 11 04:55 init_data.xml
[2026-01-11 10:04:45] drwxrwx--x 2 boinc boinc      4096 Jan 11 04:55 shared
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc    610539 Jan 11 04:55 input.tar.gz
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:55 start_atlas.sh
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc         0 Jan 11 04:55 boinc_lockfile
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc      2518 Jan 11 04:55 pandaJob.out
[2026-01-11 10:04:45] -rw------- 1 boinc boinc    989548 Jan 11 04:56 agis_schedconf.cvmfs.json
[2026-01-11 10:04:45] drwx------ 7 boinc boinc      4096 Jan 11 04:56 pilot3
[2026-01-11 10:04:45] -rw------- 1 boinc boinc 220734456 Jan 11 10:02 HITS.47898826._012844.pool.root.1
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc       529 Jan 11 10:03 boinc_task_state.xml
[2026-01-11 10:04:45] -rw------- 1 boinc boinc      1037 Jan 11 10:03 memory_monitor_summary.json
[2026-01-11 10:04:45] -rw------- 1 boinc boinc   1516240 Jan 11 10:03 agis_ddmendpoints.agis.ALL.json
[2026-01-11 10:04:45] -rw------- 1 boinc boinc    454542 Jan 11 10:03 log.47898826._012844.job.log.tgz.1
[2026-01-11 10:04:45] -rw------- 1 boinc boinc      7830 Jan 11 10:03 heartbeat.json
[2026-01-11 10:04:45] -rw------- 1 boinc boinc        95 Jan 11 10:04 pilot_heartbeat.json
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc      8192 Jan 11 10:04 boinc_mmap_file
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc        26 Jan 11 10:04 wrapper_checkpoint.txt
[2026-01-11 10:04:45] -rw------- 1 boinc boinc      4834 Jan 11 10:04 pilotlog.txt
[2026-01-11 10:04:45] -rw------- 1 boinc boinc   2610472 Jan 11 10:04 log.47898826._012844.job.log.1
[2026-01-11 10:04:45] -rw------- 1 boinc boinc       357 Jan 11 10:04 output.list
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc       620 Jan 11 10:04 runtime_log
[2026-01-11 10:04:45] -rw------- 1 boinc boinc   3082240 Jan 11 10:04 result.tar.gz
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc      9206 Jan 11 10:04 runtime_log.err
[2026-01-11 10:04:45] -rw------- 1 boinc boinc       666 Jan 11 10:04 CS3LDmOlpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0miKDmOQKZ3m.diag
[2026-01-11 10:04:45] -rw-r--r-- 1 boinc boinc     21166 Jan 11 10:04 stderr.txt
[2026-01-11 10:04:45] HITS file was successfully produced:
[2026-01-11 10:04:45] -rw------- 1 boinc boinc 220734456 Jan 11 10:02 shared/HITS.pool.root.1
[2026-01-11 10:04:45]  *** Contents of shared directory: ***
[2026-01-11 10:04:45] total 438384
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc 224444882 Jan 11 04:55 ATLAS.root_0
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc    610539 Jan 11 04:55 input.tar.gz
[2026-01-11 10:04:45] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:55 start_atlas.sh
[2026-01-11 10:04:45] -rw------- 1 boinc boinc 220734456 Jan 11 10:02 HITS.pool.root.1
[2026-01-11 10:04:45] -rw------- 1 boinc boinc   3082240 Jan 11 10:04 result.tar.gz
10:04:46 (3580129): run_atlas exited; CPU time 72033.110325
10:04:46 (3580129): called boinc_finish(0)

</stderr_txt>
]]>

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