Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:39:40 (793176): wrapper (7.7.26015): starting
00:39:40 (793176): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 00:39:40] Arguments: --nthreads 4
[2026-01-08 00:39:40] Threads: 4
[2026-01-08 00:39:40] Checking for CVMFS
[2026-01-08 00:39:40] No cvmfs_config command found, will try listing directly
[2026-01-08 00:39:41] CVMFS is ok
[2026-01-08 00:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:39:41] Further information can be found at the LHC@home message board.
[2026-01-08 00:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:39:41] Checking for apptainer binary...
[2026-01-08 00:39:41] which: no apptainer in ((null))
[2026-01-08 00:39:41] apptainer is not installed, using version from CVMFS
[2026-01-08 00:39:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:39:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-08 00:39:42] apptainer works
[2026-01-08 00:39:42] Set ATHENA_PROC_NUMBER=4
[2026-01-08 00:39:42] Set ATHENA_CORE_NUMBER=4
[2026-01-08 00:39:42] Starting ATLAS job with PandaID=6962317489
[2026-01-08 00:39:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:30:01]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:30:01] 2026-01-08 04:28:36,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,156 | INFO     | time since job start (17319s) is within the limit (174528.0s)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,451 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 05:30:01] 2026-01-08 04:28:37,459 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2541.1946
[2026-01-08 05:30:01] 2026-01-08 04:28:37,468 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962317489/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,469 | INFO     | extracted standard info from prmon json
[2026-01-08 05:30:01] 2026-01-08 04:28:37,469 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:30:01] 2026-01-08 04:28:37,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:30:01] 2026-01-08 04:28:37,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:30:01] 2026-01-08 04:28:37,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:30:01] 2026-01-08 04:28:37,476 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:30:01] 2026-01-08 04:28:37,477 | INFO     | sum of square deviations: 7102775035.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,480 | INFO     | sum of deviations: -66899551193.99999
[2026-01-08 05:30:01] 2026-01-08 04:28:37,480 | INFO     | mean x: 1767837858.5
[2026-01-08 05:30:01] 2026-01-08 04:28:37,480 | INFO     | mean y: 2399951.9014084507
[2026-01-08 05:30:01] 2026-01-08 04:28:37,481 | INFO     | intersect: 16653294670.462923
[2026-01-08 05:30:01] 2026-01-08 04:28:37,481 | INFO     | chi2: 2.4494728591555113
[2026-01-08 05:30:01] 2026-01-08 04:28:37,482 | INFO     | sum of square deviations: 6734191380.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,484 | INFO     | sum of deviations: -49024987519.999985
[2026-01-08 05:30:01] 2026-01-08 04:28:37,484 | INFO     | mean x: 1767837706.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,485 | INFO     | mean y: 2407250.1612903224
[2026-01-08 05:30:01] 2026-01-08 04:28:37,485 | INFO     | intersect: 12872285247.901741
[2026-01-08 05:30:01] 2026-01-08 04:28:37,485 | INFO     | chi2: 1.7977334642286253
[2026-01-08 05:30:01] 2026-01-08 04:28:37,486 | INFO     | current chi2=1.7977334642286253 (change=26.607332777370797 %)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,486 | INFO     | sum of square deviations: 6378584712.5
[2026-01-08 05:30:01] 2026-01-08 04:28:37,489 | INFO     | sum of deviations: -47911734592.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,489 | INFO     | mean x: 1767837553.5
[2026-01-08 05:30:01] 2026-01-08 04:28:37,489 | INFO     | mean y: 2407727.6277372264
[2026-01-08 05:30:01] 2026-01-08 04:28:37,489 | INFO     | intersect: 13281241118.219412
[2026-01-08 05:30:01] 2026-01-08 04:28:37,490 | INFO     | chi2: 1.7949461900332924
[2026-01-08 05:30:01] 2026-01-08 04:28:37,490 | INFO     | current chi2=1.7949461900332924 (change=0.15504379546769725 %)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,490 | INFO     | right removable region: 273
[2026-01-08 05:30:01] 2026-01-08 04:28:37,491 | INFO     | sum of square deviations: 6734191380.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,493 | INFO     | sum of deviations: -99917445753.99998
[2026-01-08 05:30:01] 2026-01-08 04:28:37,493 | INFO     | mean x: 1767838011.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,494 | INFO     | mean y: 2413459.1433691755
[2026-01-08 05:30:01] 2026-01-08 04:28:37,494 | INFO     | intersect: 26232416231.347286
[2026-01-08 05:30:01] 2026-01-08 04:28:37,494 | INFO     | chi2: 1.1330583363194395
[2026-01-08 05:30:01] 2026-01-08 04:28:37,494 | INFO     | current chi2=1.1330583363194395 (change=53.74276828239376 %)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,495 | INFO     | sum of square deviations: 6378584712.5
[2026-01-08 05:30:01] 2026-01-08 04:28:37,497 | INFO     | sum of deviations: -88569517848.99997
[2026-01-08 05:30:01] 2026-01-08 04:28:37,498 | INFO     | mean x: 1767838163.5
[2026-01-08 05:30:01] 2026-01-08 04:28:37,498 | INFO     | mean y: 2408580.8467153283
[2026-01-08 05:30:01] 2026-01-08 04:28:37,498 | INFO     | intersect: 24549636662.558357
[2026-01-08 05:30:01] 2026-01-08 04:28:37,498 | INFO     | chi2: 1.1109115480157883
[2026-01-08 05:30:01] 2026-01-08 04:28:37,499 | INFO     | current chi2=1.1109115480157883 (change=1.9546026531689071 %)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,499 | INFO     | left removable region: 20
[2026-01-08 05:30:01] 2026-01-08 04:28:37,499 | INFO     | sum of square deviations: 5021496942.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,501 | INFO     | sum of deviations: -41665131583.99998
[2026-01-08 05:30:01] 2026-01-08 04:28:37,502 | INFO     | mean x: 1767838133.0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,502 | INFO     | mean y: 2403532.201581028
[2026-01-08 05:30:01] 2026-01-08 04:28:37,502 | INFO     | intersect: 14670780169.969902
[2026-01-08 05:30:01] 2026-01-08 04:28:37,502 | INFO     | chi2: 0.33149120958457007
[2026-01-08 05:30:01] 2026-01-08 04:28:37,503 | INFO     | current memory leak: -8.30 B/s (using 253 data points, chi2=0.33)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,503 | INFO     | could have reported an average CPU frequency of 2508 MHz (13 samples)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,503 | INFO     | ..............................
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . Timing measurements:
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . get job = 0 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . initial setup = 2 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . payload setup = 8 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . stage-in = 0 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . payload execution = 17281 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . stage-out = 1 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,504 | INFO     | . log creation = 0 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,505 | INFO     | ..............................
[2026-01-08 05:30:01] 2026-01-08 04:28:37,618 | INFO     | 
[2026-01-08 05:30:01] 2026-01-08 04:28:37,618 | INFO     | job summary report
[2026-01-08 05:30:01] 2026-01-08 04:28:37,618 | INFO     | --------------------------------------------------
[2026-01-08 05:30:01] 2026-01-08 04:28:37,618 | INFO     | PanDA job id: 6962317489
[2026-01-08 05:30:01] 2026-01-08 04:28:37,618 | INFO     | task id: 47898826
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | errors: (none)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | pilot state: finished 
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | transexitcode: 0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | exeerrorcode: 0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | exeerrordiag: 
[2026-01-08 05:30:01] 2026-01-08 04:28:37,619 | INFO     | exitcode: 0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | exitmsg: OK
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | cpuconsumptiontime: 66911 s
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | nevents: 400
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | neventsw: 0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | pid: 804655
[2026-01-08 05:30:01] 2026-01-08 04:28:37,620 | INFO     | pgrp: 804655
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | corecount: 4
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | event service: False
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | sizes: {0: 2283808, 1: 2284007, 5: 2284269, 11: 2284325, 17293: 2316294, 17295: 2325314, 17296: 2325498, 17303: 2325692}
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | --------------------------------------------------
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | 
[2026-01-08 05:30:01] 2026-01-08 04:28:37,621 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-01-08 05:30:01] 2026-01-08 04:28:37,642 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:30:01] 2026-01-08 04:28:37,645 | INFO     | job 6962317489 has completed (purged errors)
[2026-01-08 05:30:01] 2026-01-08 04:28:37,646 | INFO     | overall cleanup function is called
[2026-01-08 05:30:01] 2026-01-08 04:28:38,654 | INFO     | --- collectZombieJob: --- 10, [804655]
[2026-01-08 05:30:01] 2026-01-08 04:28:38,654 | INFO     | zombie collector waiting for pid 804655
[2026-01-08 05:30:01] 2026-01-08 04:28:38,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:30:01] 2026-01-08 04:28:38,655 | INFO     | collected zombie processes
[2026-01-08 05:30:01] 2026-01-08 04:28:38,655 | INFO     | will attempt to kill all subprocesses of pid=804655
[2026-01-08 05:30:01] 2026-01-08 04:28:38,979 | INFO     | process IDs to be killed: [804655] (in reverse order)
[2026-01-08 05:30:01] 2026-01-08 04:28:39,057 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:30:01] 2026-01-08 04:28:39,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:30:01] 2026-01-08 04:28:39,067 | INFO     | did not find any defunct processes belonging to 804655
[2026-01-08 05:30:01] 2026-01-08 04:28:39,077 | INFO     | did not find any defunct processes belonging to 804655
[2026-01-08 05:30:01] 2026-01-08 04:28:39,078 | INFO     | ready for new job
[2026-01-08 05:30:01] 2026-01-08 04:28:39,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:30:01] 2026-01-08 04:28:39,080 | INFO     | ***************************************
[2026-01-08 05:30:01] 2026-01-08 04:28:39,081 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:30:01] 2026-01-08 04:28:39,081 | INFO     | ***************************************
[2026-01-08 05:30:01] 2026-01-08 04:28:39,081 | INFO     | 
[2026-01-08 05:30:01] 2026-01-08 04:28:39,084 | INFO     | architecture information:
[2026-01-08 05:30:01] 2026-01-08 04:28:39,084 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:30:01] 2026-01-08 04:28:39,099 | INFO     | cat /etc/os-release:
[2026-01-08 05:30:01] NAME="CentOS Linux"
[2026-01-08 05:30:01] VERSION="7 (Core)"
[2026-01-08 05:30:01] ID="centos"
[2026-01-08 05:30:01] ID_LIKE="rhel fedora"
[2026-01-08 05:30:01] VERSION_ID="7"
[2026-01-08 05:30:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:30:01] ANSI_COLOR="0;31"
[2026-01-08 05:30:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:30:01] HOME_URL="https://www.centos.org/"
[2026-01-08 05:30:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:30:01] 
[2026-01-08 05:30:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:30:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:30:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:30:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:30:01] 
[2026-01-08 05:30:01] 2026-01-08 04:28:39,100 | INFO     | ***************************************
[2026-01-08 05:30:01] 2026-01-08 04:28:39,603 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-01-08 05:30:01] 2026-01-08 04:28:39,619 | INFO     | sufficient remaining disk space (1678443020288 B)
[2026-01-08 05:30:01] 2026-01-08 04:28:39,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:30:01] 2026-01-08 04:28:39,619 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:30:01] 2026-01-08 04:28:39,620 | INFO     | update_server=False
[2026-01-08 05:30:01] 2026-01-08 04:28:39,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:30:01] 2026-01-08 04:28:39,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:30:01] 2026-01-08 04:28:39,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:30:01] 2026-01-08 04:28:39,621 | INFO     | aborting loop
[2026-01-08 05:30:01] 2026-01-08 04:28:39,793 | INFO     | all data control threads have been joined
[2026-01-08 05:30:01] 2026-01-08 04:28:39,939 | INFO     | all job control threads have been joined
[2026-01-08 05:30:01] 2026-01-08 04:28:40,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:30:01] 2026-01-08 04:28:40,532 | INFO     | all payload control threads have been joined
[2026-01-08 05:30:01] 2026-01-08 04:28:40,623 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,625 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,626 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,681 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,795 | INFO     | [job] validate thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,798 | INFO     | [data] control thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:40,945 | INFO     | [job] control thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:41,392 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:41,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:30:01] 2026-01-08 04:28:41,429 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:41,533 | INFO     | [payload] control thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:41,535 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:41,602 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:42,122 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:42,136 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:45,421 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:28:49,856 | INFO     | job.realtimelogging is not enabled
[2026-01-08 05:30:01] 2026-01-08 04:28:50,860 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:30:01] 2026-01-08 04:29:10,644 | INFO     | PID=797367 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 05:30:01] 2026-01-08 04:29:10,645 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:30:01] 2026-01-08 04:29:10,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:30:01] 2026-01-08 04:29:10,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:30:01] 2026-01-08 04:29:24,334 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:30:01] 2026-01-08 04:29:25,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22448414029632)>', '<ExcThread(monitor, started 22447959000832)>']
[2026-01-08 05:30:01] 2026-01-08 04:29:25,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:30:01] 2026-01-08 04:29:25,721 | INFO     | [monitor] control thread has ended
[2026-01-08 05:30:01] 2026-01-08 04:29:30,463 | INFO     | all workflow threads have been joined
[2026-01-08 05:30:01] 2026-01-08 04:29:30,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:30:01] 2026-01-08 04:29:30,464 | INFO     | traces error code: 0
[2026-01-08 05:30:01] 2026-01-08 04:29:30,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:30:01] 2026-01-08 04:29:30,614 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:30:01] 2026-01-08 04:29:30,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:30:01] 2026-01-08 04:29:30,619 [wrapper] pilotpid: 797367
[2026-01-08 05:30:01] 2026-01-08 04:29:30,622 [wrapper] Pilot exit status: 0
[2026-01-08 05:30:01] 2026-01-08 04:29:30,637 [wrapper] pandaids: 6962317489
[2026-01-08 05:30:01] 2026-01-08 04:29:30,695 [wrapper] cleanup supervisor_pilot  943845 797368
[2026-01-08 05:30:01] 2026-01-08 04:29:30,697 [wrapper] Test setup, not cleaning
[2026-01-08 05:30:01] 2026-01-08 04:29:30,700 [wrapper] apfmon messages muted
[2026-01-08 05:30:01] 2026-01-08 04:29:30,703 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:30:01] 2026-01-08 04:29:30,706 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:30:01]  *** Error codes and diagnostics ***
[2026-01-08 05:30:01]     "exeErrorCode": 0,
[2026-01-08 05:30:01]     "exeErrorDiag": "",
[2026-01-08 05:30:01]     "pilotErrorCode": 0,
[2026-01-08 05:30:01]     "pilotErrorDiag": "",
[2026-01-08 05:30:01]  *** Listing of results directory ***
[2026-01-08 05:30:01] total 439064
[2026-01-08 05:30:01] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc       100 Jan  7 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:30:01] -rwxr-xr-x 1 boinc boinc      7986 Jan  7 23:44 run_atlas
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc       105 Jan  7 23:44 job.xml
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc 223853483 Jan  8 00:39 EVNT.47898824._000542.pool.root.1
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc      6423 Jan  8 00:39 init_data.xml
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:39 start_atlas.sh
[2026-01-08 05:30:01] drwxrwx--x 2 boinc boinc      4096 Jan  8 00:39 shared
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc    592398 Jan  8 00:39 input.tar.gz
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc         0 Jan  8 00:39 boinc_lockfile
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc      2518 Jan  8 00:39 pandaJob.out
[2026-01-08 05:30:01] -rw------- 1 boinc boinc    989785 Jan  8 00:39 agis_schedconf.cvmfs.json
[2026-01-08 05:30:01] drwx------ 5 boinc boinc      4096 Jan  8 00:39 pilot3
[2026-01-08 05:30:01] -rw------- 1 boinc boinc 216193779 Jan  8 05:27 HITS.47898826._012723.pool.root.1
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc       528 Jan  8 05:27 boinc_task_state.xml
[2026-01-08 05:30:01] -rw------- 1 boinc boinc      1034 Jan  8 05:28 memory_monitor_summary.json
[2026-01-08 05:30:01] -rw------- 1 boinc boinc   1516240 Jan  8 05:28 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:30:01] -rw------- 1 boinc boinc    441333 Jan  8 05:28 log.47898826._012723.job.log.tgz.1
[2026-01-08 05:30:01] -rw------- 1 boinc boinc      7830 Jan  8 05:28 heartbeat.json
[2026-01-08 05:30:01] -rw------- 1 boinc boinc        95 Jan  8 05:29 pilot_heartbeat.json
[2026-01-08 05:30:01] -rw------- 1 boinc boinc      4830 Jan  8 05:29 pilotlog.txt
[2026-01-08 05:30:01] -rw------- 1 boinc boinc   2380186 Jan  8 05:29 log.47898826._012723.job.log.1
[2026-01-08 05:30:01] -rw------- 1 boinc boinc       357 Jan  8 05:29 output.list
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc       620 Jan  8 05:29 runtime_log
[2026-01-08 05:30:01] -rw------- 1 boinc boinc   2836480 Jan  8 05:29 result.tar.gz
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc      9206 Jan  8 05:29 runtime_log.err
[2026-01-08 05:30:01] -rw------- 1 boinc boinc       665 Jan  8 05:29 b2JNDmMlpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrfdKDmf4ncyn.diag
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc        26 Jan  8 05:29 wrapper_checkpoint.txt
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc      8192 Jan  8 05:30 boinc_mmap_file
[2026-01-08 05:30:01] -rw-r--r-- 1 boinc boinc     20900 Jan  8 05:30 stderr.txt
[2026-01-08 05:30:01] HITS file was successfully produced:
[2026-01-08 05:30:01] -rw------- 1 boinc boinc 216193779 Jan  8 05:27 shared/HITS.pool.root.1
[2026-01-08 05:30:01]  *** Contents of shared directory: ***
[2026-01-08 05:30:01] total 433112
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc 223853483 Jan  8 00:39 ATLAS.root_0
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:39 start_atlas.sh
[2026-01-08 05:30:01] -rw-r--r-- 2 boinc boinc    592398 Jan  8 00:39 input.tar.gz
[2026-01-08 05:30:01] -rw------- 1 boinc boinc 216193779 Jan  8 05:27 HITS.pool.root.1
[2026-01-08 05:30:01] -rw------- 1 boinc boinc   2836480 Jan  8 05:29 result.tar.gz
05:30:03 (793176): run_atlas exited; CPU time 67552.207902
05:30:03 (793176): called boinc_finish(0)

</stderr_txt>
]]>

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